data_MUB
# 
_chem_comp.id                                    MUB 
_chem_comp.name                                  "N-acetyl-alpha-muramic acid" 
_chem_comp.type                                  "D-saccharide, alpha linking" 
_chem_comp.pdbx_type                             ATOMS 
_chem_comp.formula                               "C11 H19 N O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "N-acetyl-muramic acid; N-ACETYLMURAMIC ACID" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2004-03-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   ? 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        293.270 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     MUB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        "OpenEye/OEToolkits V1.4.2" 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        ? 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 MUB "N-acetyl-muramic acid" PDB ? 
2 MUB "N-ACETYLMURAMIC ACID"  PDB ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
MUB C1   C1    C 0 1 N N S N N N -0.744 9.346  -2.817 1.370  2.611  1.828  C1   MUB 1  
MUB C2   C2    C 0 1 N N R N N N -0.305 10.579 -3.591 1.297  1.601  0.676  C2   MUB 2  
MUB C3   C3    C 0 1 N N R N N N -0.257 10.290 -5.081 0.157  0.600  0.905  C3   MUB 3  
MUB C4   C4    C 0 1 N N S N N N 0.439  8.944  -5.283 -1.154 1.294  1.291  C4   MUB 4  
MUB C5   C5    C 0 1 N N R N N N -0.371 7.833  -4.636 -0.979 2.416  2.329  C5   MUB 5  
MUB C6   C6    C 0 1 N N N N N N 0.516  6.858  -3.884 -0.872 1.912  3.767  C6   MUB 6  
MUB C7   C7    C 0 1 N N N N N N -2.258 11.901 -4.031 1.679  1.779  -1.778 C7   MUB 7  
MUB C8   C8    C 0 1 N N N N N N -3.084 13.120 -3.691 1.401  2.630  -2.973 C8   MUB 8  
MUB C9   C9    C 0 1 N N R N N N 1.631  11.693 -4.967 -0.056 -1.583 1.745  C9   MUB 9  
MUB C10  C10   C 0 1 N N N N N N 2.932  10.928 -5.153 0.888  -2.408 0.896  C10  MUB 10 
MUB C11  C11   C 0 1 N N N N N N 1.694  13.023 -4.221 -0.272 -2.220 3.106  C11  MUB 11 
MUB O1   O1    O 0 1 N Y N N N N -1.711 9.690  -1.887 2.406  3.552  1.554  O1   MUB 12 
MUB O3   O3    O 0 1 N N N N N N 0.469  11.347 -5.743 0.523  -0.304 1.947  O3   MUB 13 
MUB O4   O4    O 0 1 N N N N N N 0.651  8.619  -6.670 -1.709 1.864  0.102  O4   MUB 14 
MUB O5   O5    O 0 1 N N N N N N -1.322 8.373  -3.693 0.119  3.275  1.999  O5   MUB 15 
MUB O6   O6    O 0 1 N N N N N N -0.222 6.098  -2.935 -2.062 1.217  4.089  O6   MUB 16 
MUB O7   O7    O 0 1 N N N N N N -2.763 10.998 -4.697 2.329  0.748  -1.909 O7   MUB 17 
MUB O11  O11   O 0 1 N N N N N N 3.086  9.857  -4.396 0.394  -3.645 0.631  O11  MUB 18 
MUB O10  O10   O 0 1 N N N N N N 3.844  11.436 -5.804 1.983  -2.029 0.500  O10  MUB 19 
MUB N2   N2    N 0 1 N N N N N N -1.164 11.712 -3.327 1.148  2.270  -0.600 N2   MUB 20 
MUB H1   H1    H 0 1 N N N N N N 0.134  8.959  -2.289 1.640  2.111  2.764  H1   MUB 21 
MUB H2   H2    H 0 1 N N N N N N 0.683  10.860 -3.196 2.256  1.073  0.614  H2   MUB 22 
MUB HN2  HN2   H 0 1 N N N N N N -0.796 12.463 -2.812 0.627  3.142  -0.630 HN2  MUB 23 
MUB H81  H81   H 0 1 N N N N N N -3.920 13.186 -4.361 2.323  2.982  -3.463 H81  MUB 24 
MUB H82  H82   H 0 1 N N N N N N -2.454 13.993 -3.787 0.844  2.089  -3.754 H82  MUB 25 
MUB H83  H83   H 0 1 N N N N N N -3.431 13.035 -2.675 0.812  3.541  -2.776 H83  MUB 26 
MUB H3   H3    H 0 1 N N N N N N -1.271 10.215 -5.557 0.008  -0.001 0.000  H3   MUB 27 
MUB H9   H9    H 0 1 N N N N N N 1.140  10.966 -4.250 -1.004 -1.446 1.214  H9   MUB 28 
MUB H111 H111  H 0 0 N N N N N N 1.329  13.821 -4.870 0.300  -3.150 3.198  H111 MUB 29 
MUB H112 H112  H 0 0 N N N N N N 2.698  13.222 -3.966 -1.327 -2.480 3.245  H112 MUB 30 
MUB H113 H113  H 0 0 N N N N N N 1.104  12.949 -3.310 0.032  -1.554 3.920  H113 MUB 31 
MUB H4   H4A   H 0 1 N N N N N N 1.417  9.225  -4.828 -1.881 0.562  1.662  H4   MUB 32 
MUB H5   H5    H 0 1 N N N N N N -0.901 7.247  -5.403 -1.866 3.059  2.290  H5   MUB 33 
MUB H61  H61   H 0 1 N N N N N N 1.390  7.316  -3.397 -0.750 2.754  4.447  H61  MUB 34 
MUB H62  H62   H 0 1 N N N N N N 0.937  6.230  -4.710 -0.023 1.235  3.861  H62  MUB 35 
MUB HO6  HO6   H 0 1 N Y N N N N -0.679 6.623  -2.264 -2.491 1.705  4.813  HO6  MUB 36 
MUB HO4  H4    H 0 1 N Y N N N N 1.084  7.782  -6.795 -1.965 1.121  -0.466 HO4  MUB 37 
MUB HO11 "H1'" H 0 0 N N N N N N 3.899  9.379  -4.512 0.979  -4.221 0.095  HO11 MUB 38 
MUB HO1  HO1   H 0 1 N Y N N N N -1.985 8.920  -1.403 3.054  3.094  0.997  HO1  MUB 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
MUB C1  C2   SING N N 1  
MUB C2  C3   SING N N 2  
MUB C3  C4   SING N N 3  
MUB C4  C5   SING N N 4  
MUB C5  C6   SING N N 5  
MUB C7  C8   SING N N 6  
MUB C9  C10  SING N N 7  
MUB C9  C11  SING N N 8  
MUB C1  O1   SING N N 9  
MUB C3  O3   SING N N 10 
MUB C9  O3   SING N N 11 
MUB C4  O4   SING N N 12 
MUB C1  O5   SING N N 13 
MUB C5  O5   SING N N 14 
MUB C6  O6   SING N N 15 
MUB C7  O7   DOUB N N 16 
MUB C10 O11  SING N N 17 
MUB C10 O10  DOUB N N 18 
MUB C2  N2   SING N N 19 
MUB C7  N2   SING N N 20 
MUB C1  H1   SING N N 21 
MUB C2  H2   SING N N 22 
MUB N2  HN2  SING N N 23 
MUB C8  H81  SING N N 24 
MUB C8  H82  SING N N 25 
MUB C8  H83  SING N N 26 
MUB C3  H3   SING N N 27 
MUB C9  H9   SING N N 28 
MUB C11 H111 SING N N 29 
MUB C11 H112 SING N N 30 
MUB C11 H113 SING N N 31 
MUB C4  H4   SING N N 32 
MUB C5  H5   SING N N 33 
MUB C6  H61  SING N N 34 
MUB C6  H62  SING N N 35 
MUB O6  HO6  SING N N 36 
MUB O4  HO4  SING N N 37 
MUB O11 HO11 SING N N 38 
MUB O1  HO1  SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
MUB SMILES           ACDLabs              10.04 "O=C(O)C(OC1C(O)C(OC(O)C1NC(=O)C)CO)C"                                                                                                                
MUB SMILES_CANONICAL CACTVS               3.341 "C[C@@H](O[C@H]1[C@H](O)[C@@H](CO)O[C@H](O)[C@@H]1NC(C)=O)C(O)=O"                                                                                     
MUB SMILES           CACTVS               3.341 "C[CH](O[CH]1[CH](O)[CH](CO)O[CH](O)[CH]1NC(C)=O)C(O)=O"                                                                                              
MUB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@H](C(=O)O)O[C@@H]1[C@H]([C@H](O[C@@H]([C@H]1O)CO)O)NC(=O)C"                                                                                      
MUB SMILES           "OpenEye OEToolkits" 1.5.0 "CC(C(=O)O)OC1C(C(OC(C1O)CO)O)NC(=O)C"                                                                                                                
MUB InChI            InChI                1.03  "InChI=1S/C11H19NO8/c1-4(10(16)17)19-9-7(12-5(2)14)11(18)20-6(3-13)8(9)15/h4,6-9,11,13,15,18H,3H2,1-2H3,(H,12,14)(H,16,17)/t4-,6-,7-,8-,9-,11+/m1/s1" 
MUB InChIKey         InChI                1.03  MNLRQHMNZILYPY-MDMHTWEWSA-N                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
MUB "SYSTEMATIC NAME"           ACDLabs              10.04 "2-(acetylamino)-3-O-[(1R)-1-carboxyethyl]-2-deoxy-alpha-D-glucopyranose"                         
MUB "SYSTEMATIC NAME"           "OpenEye OEToolkits" 1.5.0 "(2R)-2-[(2S,3R,4R,5S,6R)-3-acetamido-2,5-dihydroxy-6-(hydroxymethyl)oxan-4-yl]oxypropanoic acid" 
MUB "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE             1.0   a-D-GlcpNAc3<C3O2>                                                                                
MUB "SNFG CARBOHYDRATE SYMBOL"  GMML                 1.0   MurNAc                                                                                            
# 
loop_
_pdbx_chem_comp_feature.comp_id 
_pdbx_chem_comp_feature.type 
_pdbx_chem_comp_feature.value 
_pdbx_chem_comp_feature.source 
_pdbx_chem_comp_feature.support 
MUB "CARBOHYDRATE ISOMER"                 D        PDB ? 
MUB "CARBOHYDRATE RING"                   pyranose PDB ? 
MUB "CARBOHYDRATE ANOMER"                 alpha    PDB ? 
MUB "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose   PDB ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
MUB "Create component"         2004-03-16 RCSB 
MUB "Modify descriptor"        2011-06-04 RCSB 
MUB "Modify leaving atom flag" 2014-03-31 EBI  
MUB "Other modification"       2019-08-12 RCSB 
MUB "Other modification"       2019-12-19 RCSB 
MUB "Other modification"       2020-07-03 RCSB 
MUB "Modify name"              2020-07-17 RCSB 
MUB "Modify synonyms"          2020-07-17 RCSB 
MUB "Modify atom id"           2020-07-17 RCSB 
MUB "Modify component atom id" 2020-07-17 RCSB 
MUB "Modify PCM"               2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 MUB ALA None Carbohydrate "Amino-acid backbone"   N-terminal     C10 N   ? ? 
2 MUB GLU None Carbohydrate "Amino-acid side chain" "Any position" C1  OE2 ? ? 
# 
