data_MFB
#

_chem_comp.id                                   MFB
_chem_comp.name                                 "methyl beta-L-fucopyranoside"
_chem_comp.type                                 L-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C7 H14 O5"
_chem_comp.mon_nstd_parent_comp_id              FUL
_chem_comp.pdbx_synonyms                        
;BETA-L-METHYL-FUCOSE; methyl 6-deoxy-beta-L-galactopyranoside; methyl beta-L-fucoside; methyl L-fucoside; methyl
fucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       178.183
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MFB
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1RDJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  MFB  BETA-L-METHYL-FUCOSE                       PDB  ?  
2  MFB  "methyl 6-deoxy-beta-L-galactopyranoside"  PDB  ?  
3  MFB  "methyl beta-L-fucoside"                   PDB  ?  
4  MFB  "methyl L-fucoside"                        PDB  ?  
5  MFB  "methyl fucoside"                          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MFB  C1   C1   C  0  1  N  N  S   3.887  47.767   0.698   1.688  -2.499   2.445  C1   MFB   1  
MFB  C2   C2   C  0  1  N  N  S   4.308  46.683   1.684   0.540  -3.041   1.590  C2   MFB   2  
MFB  C3   C3   C  0  1  N  N  R   3.083  45.935   2.183  -0.294  -1.894   1.016  C3   MFB   3  
MFB  C4   C4   C  0  1  N  N  S   2.319  45.352   0.993   0.597  -0.857   0.333  C4   MFB   4  
MFB  C5   C5   C  0  1  N  N  S   1.971  46.480   0.014   1.705  -0.411   1.292  C5   MFB   5  
MFB  C6   C6   C  0  1  N  N  N   1.293  45.990  -1.252   2.677   0.567   0.642  C6   MFB   6  
MFB  O1   O1   O  0  1  N  N  N   5.013  48.477   0.265   2.520  -3.574   2.881  O1   MFB   7  
MFB  O2   O2   O  0  1  N  N  N   4.974  47.266   2.779  -0.308  -3.854   2.399  O2   MFB   8  
MFB  O3   O3   O  0  1  N  N  N   3.491  44.890   3.051  -1.238  -2.396   0.074  O3   MFB   9  
MFB  O4   O4   O  0  1  N  N  N   3.130  44.381   0.343   1.194  -1.429  -0.833  O4   MFB  10  
MFB  O5   O5   O  0  1  N  N  N   3.175  47.176  -0.383   2.465  -1.548   1.719  O5   MFB  11  
MFB  CM   CM   C  0  1  N  N  N       ?       ?       ?   3.596  -3.103   3.677  CM   MFB  12  
MFB  H1   H1   H  0  1  N  N  N   3.204  48.495   1.194   1.305  -2.025   3.357  H1   MFB  13  
MFB  H2   H2   H  0  1  N  N  N   4.993  45.971   1.167   0.915  -3.676   0.778  H2   MFB  14  
MFB  H3   H3   H  0  1  N  N  N   2.416  46.636   2.737  -0.869  -1.415   1.818  H3   MFB  15  
MFB  H4   H4   H  0  1  N  N  N   1.379  44.867   1.347  -0.001  -0.000   0.001  H4   MFB  16  
MFB  H5   H5   H  0  1  N  N  N   1.262  47.147   0.558   1.268   0.071   2.176  H5   MFB  17  
MFB  H61  H61  H  0  1  N  N  N   1.040  46.810  -1.963   2.999   1.326   1.361  H61  MFB  18  
MFB  H62  H62  H  0  1  N  N  N   1.908  45.207  -1.753   3.564   0.042   0.275  H62  MFB  19  
MFB  H63  H63  H  0  1  N  N  N   0.388  45.385  -1.007   2.203   1.074  -0.204  H63  MFB  20  
MFB  HO2  HO2  H  0  1  N  Y  N   5.236  46.590   3.393  -1.216  -3.675   2.111  HO2  MFB  21  
MFB  HO3  HO3  H  0  1  N  Y  N   2.725  44.422   3.363  -0.737  -2.624  -0.725  HO3  MFB  22  
MFB  HO4  HO4  H  0  1  N  Y  N   2.655  44.018  -0.396   1.763  -2.148  -0.522  HO4  MFB  23  
MFB  HM1  HM1  H  0  1  N  N  N   0.896   0.565  -0.344   3.258  -2.976   4.709  HM1  MFB  24  
MFB  HM2  HM2  H  0  1  N  N  N  -0.246  -0.817   0.716   3.955  -2.150   3.280  HM2  MFB  25  
MFB  HM3  HM3  H  0  1  N  N  N  -0.708  -0.763  -0.396   4.406  -3.836   3.649  HM3  MFB  26  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MFB  C1  C2   SING  N  N   1  
MFB  C1  O1   SING  N  N   2  
MFB  C1  O5   SING  N  N   3  
MFB  C1  H1   SING  N  N   4  
MFB  C2  C3   SING  N  N   5  
MFB  C2  O2   SING  N  N   6  
MFB  C2  H2   SING  N  N   7  
MFB  C3  C4   SING  N  N   8  
MFB  C3  O3   SING  N  N   9  
MFB  C3  H3   SING  N  N  10  
MFB  C4  C5   SING  N  N  11  
MFB  C4  O4   SING  N  N  12  
MFB  C4  H4   SING  N  N  13  
MFB  C5  C6   SING  N  N  14  
MFB  C5  O5   SING  N  N  15  
MFB  C5  H5   SING  N  N  16  
MFB  C6  H61  SING  N  N  17  
MFB  C6  H62  SING  N  N  18  
MFB  C6  H63  SING  N  N  19  
MFB  O1  CM   SING  N  N  20  
MFB  O2  HO2  SING  N  N  21  
MFB  O3  HO3  SING  N  N  22  
MFB  O4  HO4  SING  N  N  23  
MFB  CM  HM1  SING  N  N  24  
MFB  CM  HM2  SING  N  N  25  
MFB  CM  HM3  SING  N  N  26  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MFB  SMILES            ACDLabs               10.04  "OC1C(O)C(O)C(OC1OC)C"  
MFB  SMILES_CANONICAL  CACTVS                3.341  "CO[C@H]1O[C@@H](C)[C@@H](O)[C@@H](O)[C@@H]1O"  
MFB  SMILES            CACTVS                3.341  "CO[CH]1O[CH](C)[CH](O)[CH](O)[CH]1O"  
MFB  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)OC)O)O)O"  
MFB  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1C(C(C(C(O1)OC)O)O)O"  
MFB  InChI             InChI                 1.03   "InChI=1S/C7H14O5/c1-3-4(8)5(9)6(10)7(11-2)12-3/h3-10H,1-2H3/t3-,4+,5+,6-,7-/m0/s1"  
MFB  InChIKey          InChI                 1.03   OHWCAVRRXKJCRB-XUVCUMPTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MFB  "SYSTEMATIC NAME"                      ACDLabs               10.04  "methyl 6-deoxy-beta-L-galactopyranoside"  
MFB  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.5.0  "(2S,3S,4R,5S,6S)-2-methoxy-6-methyl-oxane-3,4,5-triol"  
MFB  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    LFucp[1Me]b  
MFB  "COMMON NAME"                          GMML                  1.0    1-methyl-b-L-fucopyranose  
MFB  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    o1-methyl-b-L-fucose  
#
_pdbx_chem_comp_related.comp_id            MFB
_pdbx_chem_comp_related.related_comp_id    FUL
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  MFB  C1   FUL  C1   "Carbohydrate core"  
 2  MFB  C2   FUL  C2   "Carbohydrate core"  
 3  MFB  C3   FUL  C3   "Carbohydrate core"  
 4  MFB  C4   FUL  C4   "Carbohydrate core"  
 5  MFB  C5   FUL  C5   "Carbohydrate core"  
 6  MFB  C6   FUL  C6   "Carbohydrate core"  
 7  MFB  O1   FUL  O1   "Carbohydrate core"  
 8  MFB  O2   FUL  O2   "Carbohydrate core"  
 9  MFB  O3   FUL  O3   "Carbohydrate core"  
10  MFB  O4   FUL  O4   "Carbohydrate core"  
11  MFB  O5   FUL  O5   "Carbohydrate core"  
12  MFB  H1   FUL  H1   "Carbohydrate core"  
13  MFB  H2   FUL  H2   "Carbohydrate core"  
14  MFB  H3   FUL  H3   "Carbohydrate core"  
15  MFB  H4   FUL  H4   "Carbohydrate core"  
16  MFB  H5   FUL  H5   "Carbohydrate core"  
17  MFB  H61  FUL  H61  "Carbohydrate core"  
18  MFB  H62  FUL  H62  "Carbohydrate core"  
19  MFB  H63  FUL  H63  "Carbohydrate core"  
20  MFB  HO2  FUL  HO2  "Carbohydrate core"  
21  MFB  HO3  FUL  HO3  "Carbohydrate core"  
22  MFB  HO4  FUL  HO4  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
MFB  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
MFB  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
MFB  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
MFB  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MFB  "Create component"          1999-07-08  RCSB  
MFB  "Modify descriptor"         2011-06-04  RCSB  
MFB  "Other modification"        2020-07-03  RCSB  
MFB  "Modify parent residue"     2020-07-17  RCSB  
MFB  "Modify name"               2020-07-17  RCSB  
MFB  "Modify synonyms"           2020-07-17  RCSB  
MFB  "Modify linking type"       2020-07-17  RCSB  
MFB  "Modify leaving atom flag"  2020-07-17  RCSB  
##
