data_DCB
# 
_chem_comp.id                                    DCB 
_chem_comp.name                                  2,4-DINITROPHENYL-2-DEOXY-2-FLUORO-BETA-D-CELLOBIOSIDE 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H23 F N2 O14" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "2',4'-DINITROPHENYL-2DEOXY-2-FLURO-B-D-CELLOBIOSIDE" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        510.379 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DCB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4A3H 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DCB C1A  C1A  C 0  1 N N S N N N 61.651 41.491 36.136 1.346  1.019  0.763  C1A  DCB 1  
DCB C2A  C2A  C 0  1 N N R N N N 60.550 41.961 35.226 0.338  2.135  1.046  C2A  DCB 2  
DCB C3A  C3A  C 0  1 N N S N N N 60.801 43.406 34.807 -0.927 1.523  1.660  C3A  DCB 3  
DCB C4A  C4A  C 0  1 N N S N N N 61.351 44.064 36.095 -1.429 0.407  0.736  C4A  DCB 4  
DCB C5A  C5A  C 0  1 N N R N N N 62.777 43.584 36.295 -0.288 -0.578 0.475  C5A  DCB 5  
DCB C6A  C6A  C 0  1 N N N N N N 63.429 44.052 37.598 -0.789 -1.712 -0.422 C6A  DCB 6  
DCB O1A  O1A  O 0  1 N N N N N N 61.061 41.278 37.364 2.540  1.584  0.219  O1A  DCB 7  
DCB F2A  F2A  F 0  1 N N N N N N 60.653 41.180 34.092 0.894  3.055  1.941  F2A  DCB 8  
DCB O3A  O3A  O 0  1 N N N N N N 59.482 43.860 34.539 -1.935 2.527  1.792  O3A  DCB 9  
DCB O4A  O4A  O 0  1 N N N N N N 61.425 45.468 35.815 -2.518 -0.276 1.360  O4A  DCB 10 
DCB O5A  O5A  O 0  1 N N N N N N 62.849 42.175 36.173 0.792  0.093  -0.170 O5A  DCB 11 
DCB O6A  O6A  O 0  1 N N N N N N 62.606 43.624 38.689 0.234  -2.700 -0.557 O6A  DCB 12 
DCB C1B  C1B  C 0  1 N N S N N N 61.015 46.226 36.949 -3.506 -0.488 0.350  C1B  DCB 13 
DCB C2B  C2B  C 0  1 N N R N N N 61.368 47.677 36.567 -4.577 -1.445 0.880  C2B  DCB 14 
DCB C3B  C3B  C 0  1 N N S N N N 60.779 48.575 37.680 -5.614 -1.693 -0.220 C3B  DCB 15 
DCB C4B  C4B  C 0  1 N N S N N N 59.258 48.347 37.697 -6.136 -0.339 -0.715 C4B  DCB 16 
DCB C5B  C5B  C 0  1 N N R N N N 58.984 46.859 38.022 -4.947 0.533  -1.126 C5B  DCB 17 
DCB C6B  C6B  C 0  1 N N N N N N 57.501 46.505 38.088 -5.460 1.874  -1.655 C6B  DCB 18 
DCB O2B  O2B  O 0  1 N N N N N N 62.785 47.753 36.504 -3.968 -2.683 1.255  O2B  DCB 19 
DCB O3B  O3B  O 0  1 N N N N N N 60.989 49.921 37.235 -6.696 -2.464 0.305  O3B  DCB 20 
DCB O4B  O4B  O 0  1 N N N N N N 58.637 49.195 38.652 -6.994 -0.539 -1.840 O4B  DCB 21 
DCB O5B  O5B  O 0  1 N N N N N N 59.602 46.115 36.996 -4.103 0.759  0.001  O5B  DCB 22 
DCB O6B  O6B  O 0  1 N N N N N N 56.967 46.743 36.790 -4.361 2.643  -2.150 O6B  DCB 23 
DCB C1   C1   C 0  1 Y N N N N N 61.689 40.525 38.422 3.434  0.569  0.094  C1   DCB 24 
DCB C2   C2   C 0  1 Y N N N N N 62.744 39.576 38.234 3.081  -0.718 0.475  C2   DCB 25 
DCB C3   C3   C 0  1 Y N N N N N 63.252 38.728 39.150 3.992  -1.749 0.347  C3   DCB 26 
DCB C4   C4   C 0  1 Y N N N N N 62.702 38.859 40.424 5.254  -1.499 -0.160 C4   DCB 27 
DCB C5   C5   C 0  1 Y N N N N N 61.719 39.725 40.786 5.607  -0.218 -0.541 C5   DCB 28 
DCB C6   C6   C 0  1 Y N N N N N 61.238 40.565 39.792 4.698  0.815  -0.420 C6   DCB 29 
DCB N4   N4   N 1  1 N N N N N N 63.266 37.941 41.432 6.228  -2.606 -0.296 N4   DCB 30 
DCB N6   N6   N 1  1 N N N N N N 60.188 41.480 40.210 5.078  2.187  -0.828 N6   DCB 31 
DCB O41  O41  O -1 1 N N N N N N 64.127 37.191 41.021 5.917  -3.735 0.040  O41  DCB 32 
DCB O42  O42  O 0  1 N N N N N N 62.831 38.041 42.542 7.340  -2.387 -0.742 O42  DCB 33 
DCB O61  O61  O -1 1 N N N N N N 59.625 42.281 39.475 6.192  2.405  -1.270 O61  DCB 34 
DCB O62  O62  O 0  1 N N N N N N 59.842 41.436 41.391 4.276  3.097  -0.721 O62  DCB 35 
DCB HC1A HC1A H 0  0 N N N N N N 62.067 40.557 35.690 1.582  0.500  1.692  HC1A DCB 36 
DCB HC2A HC2A H 0  0 N N N N N N 59.556 41.890 35.727 0.083  2.641  0.115  HC2A DCB 37 
DCB HC3A HC3A H 0  0 N N N N N N 61.489 43.594 33.950 -0.693 1.108  2.640  HC3A DCB 38 
DCB HC4A HC4A H 0  0 N N N N N N 60.720 43.828 36.983 -1.762 0.838  -0.208 HC4A DCB 39 
DCB HC5A HC5A H 0  0 N N N N N N 63.370 44.062 35.481 0.056  -0.991 1.423  HC5A DCB 40 
DCB H6A1 1H6A H 0  0 N N N N N N 64.485 43.710 37.696 -1.674 -2.165 0.026  H6A1 DCB 41 
DCB HCA2 2HCA H 0  0 N N N N N N 63.623 45.149 37.611 -1.042 -1.314 -1.404 HCA2 DCB 42 
DCB HO3A HO3A H 0  0 N N N N N N 59.638 44.760 34.278 -1.577 3.207  2.379  HO3A DCB 43 
DCB HO6A HO6A H 0  0 N N N N N N 63.010 43.914 39.497 -0.122 -3.395 -1.128 HO6A DCB 44 
DCB HC1B HC1B H 0  0 N N N N N N 61.473 45.909 37.915 -3.035 -0.924 -0.531 HC1B DCB 45 
DCB HC2B HC2B H 0  0 N N N N N N 60.955 48.004 35.584 -5.065 -1.001 1.748  HC2B DCB 46 
DCB HC3B HC3B H 0  0 N N N N N N 61.231 48.369 38.678 -5.149 -2.231 -1.047 HC3B DCB 47 
DCB HC4B HC4B H 0  0 N N N N N N 58.828 48.594 36.698 -6.691 0.152  0.084  HC4B DCB 48 
DCB HC5B HC5B H 0  0 N N N N N N 59.388 46.630 39.035 -4.381 0.028  -1.908 HC5B DCB 49 
DCB H6B1 1H6B H 0  0 N N N N N N 57.311 45.471 38.459 -5.950 2.419  -0.848 H6B1 DCB 50 
DCB H6B2 2H6B H 0  0 N N N N N N 56.954 47.046 38.895 -6.173 1.699  -2.461 H6B2 DCB 51 
DCB HO2B HO2B H 0  0 N N N N N N 63.002 48.647 36.268 -3.320 -2.479 1.942  HO2B DCB 52 
DCB HO3B HO3B H 0  0 N N N N N N 60.627 50.472 37.918 -6.319 -3.299 0.615  HO3B DCB 53 
DCB HO4B HO4B H 0  0 N N N N N N 57.697 49.054 38.662 -7.723 -1.099 -1.540 HO4B DCB 54 
DCB HO6B HO6B H 0  0 N N N N N N 56.043 46.522 36.831 -4.727 3.478  -2.472 HO6B DCB 55 
DCB HC2  HC2  H 0  1 N N N N N N 63.232 39.485 37.249 2.096  -0.914 0.872  HC2  DCB 56 
DCB HC3  HC3  H 0  1 N N N N N N 64.037 38.001 38.884 3.718  -2.751 0.644  HC3  DCB 57 
DCB HC5  HC5  H 0  1 N N N N N N 61.336 39.744 41.820 6.594  -0.026 -0.936 HC5  DCB 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DCB C1A C2A  SING N N 1  
DCB C1A O1A  SING N N 2  
DCB C1A O5A  SING N N 3  
DCB C1A HC1A SING N N 4  
DCB C2A C3A  SING N N 5  
DCB C2A F2A  SING N N 6  
DCB C2A HC2A SING N N 7  
DCB C3A C4A  SING N N 8  
DCB C3A O3A  SING N N 9  
DCB C3A HC3A SING N N 10 
DCB C4A C5A  SING N N 11 
DCB C4A O4A  SING N N 12 
DCB C4A HC4A SING N N 13 
DCB C5A C6A  SING N N 14 
DCB C5A O5A  SING N N 15 
DCB C5A HC5A SING N N 16 
DCB C6A O6A  SING N N 17 
DCB C6A H6A1 SING N N 18 
DCB C6A HCA2 SING N N 19 
DCB O1A C1   SING N N 20 
DCB O3A HO3A SING N N 21 
DCB O4A C1B  SING N N 22 
DCB O6A HO6A SING N N 23 
DCB C1B C2B  SING N N 24 
DCB C1B O5B  SING N N 25 
DCB C1B HC1B SING N N 26 
DCB C2B C3B  SING N N 27 
DCB C2B O2B  SING N N 28 
DCB C2B HC2B SING N N 29 
DCB C3B C4B  SING N N 30 
DCB C3B O3B  SING N N 31 
DCB C3B HC3B SING N N 32 
DCB C4B C5B  SING N N 33 
DCB C4B O4B  SING N N 34 
DCB C4B HC4B SING N N 35 
DCB C5B C6B  SING N N 36 
DCB C5B O5B  SING N N 37 
DCB C5B HC5B SING N N 38 
DCB C6B O6B  SING N N 39 
DCB C6B H6B1 SING N N 40 
DCB C6B H6B2 SING N N 41 
DCB O2B HO2B SING N N 42 
DCB O3B HO3B SING N N 43 
DCB O4B HO4B SING N N 44 
DCB O6B HO6B SING N N 45 
DCB C1  C2   DOUB Y N 46 
DCB C1  C6   SING Y N 47 
DCB C2  C3   SING Y N 48 
DCB C2  HC2  SING N N 49 
DCB C3  C4   DOUB Y N 50 
DCB C3  HC3  SING N N 51 
DCB C4  C5   SING Y N 52 
DCB C4  N4   SING N N 53 
DCB C5  C6   DOUB Y N 54 
DCB C5  HC5  SING N N 55 
DCB C6  N6   SING N N 56 
DCB N4  O41  SING N N 57 
DCB N4  O42  DOUB N N 58 
DCB N6  O61  SING N N 59 
DCB N6  O62  DOUB N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DCB SMILES           ACDLabs              10.04 "[O-][N+](=O)c3ccc(OC2OC(C(OC1OC(C(O)C(O)C1O)CO)C(O)C2F)CO)c([N+]([O-])=O)c3"                                                                                                                         
DCB SMILES_CANONICAL CACTVS               3.341 "OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](F)[C@@H](O[C@@H]2CO)Oc3ccc(cc3[N+]([O-])=O)[N+]([O-])=O)[C@H](O)[C@@H](O)[C@@H]1O"                                                                             
DCB SMILES           CACTVS               3.341 "OC[CH]1O[CH](O[CH]2[CH](O)[CH](F)[CH](O[CH]2CO)Oc3ccc(cc3[N+]([O-])=O)[N+]([O-])=O)[CH](O)[CH](O)[CH]1O"                                                                                             
DCB SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(c(cc1[N+](=O)[O-])[N+](=O)[O-])O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)F"                                                                         
DCB SMILES           "OpenEye OEToolkits" 1.5.0 "c1cc(c(cc1[N+](=O)[O-])[N+](=O)[O-])OC2C(C(C(C(O2)CO)OC3C(C(C(C(O3)CO)O)O)O)O)F"                                                                                                                     
DCB InChI            InChI                1.03  "InChI=1S/C18H23FN2O14/c19-11-13(25)16(35-18-15(27)14(26)12(24)9(4-22)33-18)10(5-23)34-17(11)32-8-2-1-6(20(28)29)3-7(8)21(30)31/h1-3,9-18,22-27H,4-5H2/t9-,10-,11-,12-,13-,14+,15-,16-,17-,18+/m1/s1" 
DCB InChIKey         InChI                1.03  WFVCNOHOODVBQK-IUBYCILNSA-N                                                                                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DCB "SYSTEMATIC NAME" ACDLabs              10.04 "2,4-dinitrophenyl 2-deoxy-2-fluoro-4-O-beta-D-glucopyranosyl-beta-D-glucopyranoside"                                                              
DCB "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3R,4S,5S,6R)-2-[(2R,3S,4S,5R,6S)-6-(2,4-dinitrophenoxy)-5-fluoro-4-hydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DCB "Create component"  1999-07-08 RCSB 
DCB "Modify descriptor" 2011-06-04 RCSB 
DCB "Modify synonyms"   2021-03-13 RCSB 
DCB "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      DCB 
_pdbx_chem_comp_synonyms.name         "2',4'-DINITROPHENYL-2DEOXY-2-FLURO-B-D-CELLOBIOSIDE" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            DCB 
_pdbx_chem_comp_pcm.modified_residue_id                GLU 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1A 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OE2 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
