data_D9B
# 
_chem_comp.id                                    D9B 
_chem_comp.name                                  "~{N}-[3-[2-(dimethylamino)ethyl]-2-oxidanylidene-1,3-benzoxazol-5-yl]-1-methyl-6-oxidanylidene-pyridine-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H20 N4 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-01-10 
_chem_comp.pdbx_modified_date                    2018-05-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        356.376 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D9B 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6FGG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D9B C01  C1  C 0 1 N N N -30.225 -2.919  -14.741 -2.199 -3.845 -0.120 C01  D9B 1  
D9B C03  C2  C 0 1 N N N -28.542 -2.734  -13.095 -3.939 -4.205 1.525  C03  D9B 2  
D9B C04  C3  C 0 1 N N N -28.910 -4.842  -14.165 -3.584 -1.995 0.602  C04  D9B 3  
D9B C05  C4  C 0 1 N N N -29.131 -5.593  -15.476 -3.402 -1.230 -0.711 C05  D9B 4  
D9B C07  C5  C 0 1 N N N -29.787 -8.032  -15.028 -4.554 0.985  -0.459 C07  D9B 5  
D9B C10  C6  C 0 1 Y N N -27.701 -8.984  -15.110 -2.874 2.317  0.032  C10  D9B 6  
D9B C11  C7  C 0 1 Y N N -27.548 -7.621  -15.343 -2.365 1.030  -0.140 C11  D9B 7  
D9B C12  C8  C 0 1 Y N N -26.268 -7.107  -15.574 -1.008 0.794  0.007  C12  D9B 8  
D9B C13  C9  C 0 1 Y N N -25.198 -7.994  -15.595 -0.157 1.842  0.323  C13  D9B 9  
D9B C15  C10 C 0 1 N N N -23.548 -6.189  -16.083 1.824  0.669  -0.276 C15  D9B 10 
D9B C17  C11 C 0 1 N N N -22.129 -5.801  -15.940 3.242  0.341  -0.038 C17  D9B 11 
D9B C18  C12 C 0 1 N N N -21.239 -6.640  -15.062 3.871  -0.621 -0.802 C18  D9B 12 
D9B C20  C13 C 0 1 N N N -18.998 -6.944  -14.000 5.812  -1.948 -1.412 C20  D9B 13 
D9B C21  C14 C 0 1 N N N -19.421 -4.924  -15.388 5.874  -0.300 0.370  C21  D9B 14 
D9B C23  C15 C 0 1 N N N -20.335 -4.065  -16.233 5.276  0.692  1.170  C23  D9B 15 
D9B C24  C16 C 0 1 N N N -21.706 -4.517  -16.490 3.970  1.015  0.972  C24  D9B 16 
D9B C25  C17 C 0 1 Y N N -25.357 -9.356  -15.312 -0.666 3.125  0.492  C25  D9B 17 
D9B C26  C18 C 0 1 Y N N -26.618 -9.868  -15.087 -2.019 3.360  0.354  C26  D9B 18 
D9B N02  N1  N 0 1 N N N -28.906 -3.392  -14.341 -3.535 -3.439 0.338  N02  D9B 19 
D9B N06  N2  N 0 1 N N N -28.845 -7.001  -15.297 -3.451 0.210  -0.448 N06  D9B 20 
D9B N14  N3  N 0 1 N N N -23.862 -7.530  -15.717 1.215  1.609  0.473  N14  D9B 21 
D9B N19  N4  N 0 1 N N N -19.891 -6.188  -14.832 5.165  -0.924 -0.588 N19  D9B 22 
D9B O08  O1  O 0 1 N N N -30.962 -7.907  -14.917 -5.682 0.597  -0.691 O08  D9B 23 
D9B O09  O2  O 0 1 N N N -29.092 -9.250  -14.913 -4.214 2.250  -0.168 O09  D9B 24 
D9B O16  O3  O 0 1 N N N -24.340 -5.335  -16.305 1.205  0.091  -1.148 O16  D9B 25 
D9B O22  O4  O 0 1 N N N -18.332 -4.564  -15.121 7.045  -0.593 0.544  O22  D9B 26 
D9B H012 H1  H 0 0 N N N -30.200 -1.827  -14.868 -1.463 -3.604 0.647  H012 D9B 27 
D9B H011 H2  H 0 0 N N N -30.511 -3.392  -15.692 -2.191 -4.919 -0.308 H011 D9B 28 
D9B H013 H3  H 0 0 N N N -30.959 -3.181  -13.965 -1.954 -3.313 -1.039 H013 D9B 29 
D9B H033 H4  H 0 0 N N N -27.547 -3.078  -12.775 -3.266 -3.977 2.351  H033 D9B 30 
D9B H032 H5  H 0 0 N N N -28.522 -1.645  -13.248 -4.958 -3.934 1.801  H032 D9B 31 
D9B H031 H6  H 0 0 N N N -29.282 -2.981  -12.320 -3.894 -5.271 1.302  H031 D9B 32 
D9B H042 H7  H 0 0 N N N -29.716 -5.110  -13.466 -2.786 -1.724 1.294  H042 D9B 33 
D9B H041 H8  H 0 0 N N N -27.941 -5.148  -13.743 -4.548 -1.738 1.041  H041 D9B 34 
D9B H051 H9  H 0 0 N N N -28.464 -5.182  -16.248 -2.438 -1.487 -1.150 H051 D9B 35 
D9B H052 H10 H 0 0 N N N -30.177 -5.472  -15.793 -4.200 -1.501 -1.403 H052 D9B 36 
D9B H121 H11 H 0 0 N N N -26.115 -6.050  -15.732 -0.614 -0.203 -0.124 H121 D9B 37 
D9B H181 H12 H 0 0 N N N -21.601 -7.555  -14.617 3.322  -1.134 -1.577 H181 D9B 38 
D9B H202 H13 H 0 0 N N N -19.500 -7.863  -13.664 6.253  -1.481 -2.293 H202 D9B 39 
D9B H201 H14 H 0 0 N N N -18.097 -7.207  -14.574 6.593  -2.441 -0.832 H201 D9B 40 
D9B H203 H15 H 0 0 N N N -18.713 -6.341  -13.125 5.071  -2.685 -1.723 H203 D9B 41 
D9B H231 H16 H 0 0 N N N -19.982 -3.130  -16.642 5.851  1.193  1.935  H231 D9B 42 
D9B H241 H17 H 0 0 N N N -22.387 -3.914  -17.073 3.496  1.773  1.577  H241 D9B 43 
D9B H251 H18 H 0 0 N N N -24.494 -10.004 -15.270 -0.001 3.940  0.739  H251 D9B 44 
D9B H261 H19 H 0 0 N N N -26.764 -10.921 -14.899 -2.411 4.357  0.491  H261 D9B 45 
D9B H141 H21 H 0 0 N N N -23.113 -8.168  -15.539 1.727  2.124  1.116  H141 D9B 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D9B C24 C23  DOUB N N 1  
D9B C24 C17  SING N N 2  
D9B O16 C15  DOUB N N 3  
D9B C23 C21  SING N N 4  
D9B C15 C17  SING N N 5  
D9B C15 N14  SING N N 6  
D9B C17 C18  DOUB N N 7  
D9B N14 C13  SING N N 8  
D9B C13 C12  DOUB Y N 9  
D9B C13 C25  SING Y N 10 
D9B C12 C11  SING Y N 11 
D9B C05 N06  SING N N 12 
D9B C05 C04  SING N N 13 
D9B C21 O22  DOUB N N 14 
D9B C21 N19  SING N N 15 
D9B C11 N06  SING N N 16 
D9B C11 C10  DOUB Y N 17 
D9B C25 C26  DOUB Y N 18 
D9B N06 C07  SING N N 19 
D9B C10 C26  SING Y N 20 
D9B C10 O09  SING N N 21 
D9B C18 N19  SING N N 22 
D9B C07 O08  DOUB N N 23 
D9B C07 O09  SING N N 24 
D9B N19 C20  SING N N 25 
D9B C01 N02  SING N N 26 
D9B N02 C04  SING N N 27 
D9B N02 C03  SING N N 28 
D9B C01 H012 SING N N 29 
D9B C01 H011 SING N N 30 
D9B C01 H013 SING N N 31 
D9B C03 H033 SING N N 32 
D9B C03 H032 SING N N 33 
D9B C03 H031 SING N N 34 
D9B C04 H042 SING N N 35 
D9B C04 H041 SING N N 36 
D9B C05 H051 SING N N 37 
D9B C05 H052 SING N N 38 
D9B C12 H121 SING N N 39 
D9B C18 H181 SING N N 40 
D9B C20 H202 SING N N 41 
D9B C20 H201 SING N N 42 
D9B C20 H203 SING N N 43 
D9B C23 H231 SING N N 44 
D9B C24 H241 SING N N 45 
D9B C25 H251 SING N N 46 
D9B C26 H261 SING N N 47 
D9B N14 H141 SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D9B InChI            InChI                1.03  "InChI=1S/C18H20N4O4/c1-20(2)8-9-22-14-10-13(5-6-15(14)26-18(22)25)19-17(24)12-4-7-16(23)21(3)11-12/h4-7,10-11H,8-9H2,1-3H3,(H,19,24)" 
D9B InChIKey         InChI                1.03  RMQWPQCQFPMELT-UHFFFAOYSA-N                                                                                                            
D9B SMILES_CANONICAL CACTVS               3.385 "CN(C)CCN1C(=O)Oc2ccc(NC(=O)C3=CN(C)C(=O)C=C3)cc12"                                                                                    
D9B SMILES           CACTVS               3.385 "CN(C)CCN1C(=O)Oc2ccc(NC(=O)C3=CN(C)C(=O)C=C3)cc12"                                                                                    
D9B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN1C=C(C=CC1=O)C(=O)Nc2ccc3c(c2)N(C(=O)O3)CCN(C)C"                                                                                    
D9B SMILES           "OpenEye OEToolkits" 2.0.6 "CN1C=C(C=CC1=O)C(=O)Nc2ccc3c(c2)N(C(=O)O3)CCN(C)C"                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
D9B "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[3-[2-(dimethylamino)ethyl]-2-oxidanylidene-1,3-benzoxazol-5-yl]-1-methyl-6-oxidanylidene-pyridine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D9B "Create component" 2018-01-10 EBI  
D9B "Initial release"  2018-05-30 RCSB 
# 
