data_C5B
#

_chem_comp.id                                   C5B
_chem_comp.name                                 "(1S,3R)-1-AMINOCYCLOPENTANE-1,3-DICARBOXYLIC ACID"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C7 H11 N O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "1S,3R-ACPD"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2006-12-26
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       173.167
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    C5B
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       "OpenEye/OEToolkits V1.4.2"
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C5B  N     N     N  0  1  N  N  N  19.136  -5.747  50.682  -3.022   3.998  -2.284  N     C5B   1  
C5B  CA    CA    C  0  1  N  N  S  20.300  -4.826  50.628  -2.556   2.653  -2.581  CA    C5B   2  
C5B  C     C     C  0  1  N  N  N  20.340  -3.961  49.365  -3.636   2.012  -3.414  C     C5B   3  
C5B  O     O     O  0  1  N  N  N  19.655  -4.284  48.372  -4.282   1.027  -3.089  O     C5B   4  
C5B  OXT   OXT   O  0  1  N  N  N  21.063  -2.948  49.341  -3.796   2.677  -4.584  OXT   C5B   5  
C5B  CB1   CB1   C  0  1  N  N  N  21.530  -5.710  50.742  -2.277   1.838  -1.316  CB1   C5B   6  
C5B  CB2   CB2   C  0  1  N  N  N  20.215  -3.953  51.877  -1.219   2.649  -3.314  CB2   C5B   7  
C5B  CG2   CG2   C  0  1  N  N  N  21.369  -4.419  52.772  -0.708   1.225  -3.111  CG2   C5B   8  
C5B  CD    CD    C  0  1  N  N  R  22.373  -5.027  51.803  -1.207   0.812  -1.723  CD    C5B   9  
C5B  CE    CE    C  0  1  N  N  N  23.275  -6.033  52.495  -0.083   0.814  -0.733  CE    C5B  10  
C5B  OZ1   OZ1   O  0  1  N  N  N  24.472  -5.734  52.704   0.902   1.534  -0.792  OZ1   C5B  11  
C5B  OZ2   OZ2   O  0  1  N  N  N  22.811  -7.141  52.839  -0.304  -0.099   0.244  OZ2   C5B  12  
C5B  HN1   1HN   H  0  1  N  N  N  18.918  -5.954  51.636  -2.342   4.719  -2.161  HN1   C5B  13  
C5B  HN2   2HN   H  0  1  N  N  N  18.347  -5.313  50.247  -3.977   4.120  -2.014  HN2   C5B  14  
C5B  HOXT  HOXT  H  0  0  N  N  N  20.986  -2.524  48.495  -4.495   2.273  -5.142  HOXT  C5B  15  
C5B  HB11  1HB1  H  0  0  N  N  N  21.261  -6.734  51.041  -3.176   1.333  -0.943  HB11  C5B  16  
C5B  HB12  2HB1  H  0  0  N  N  N  22.062  -5.818  49.785  -1.909   2.482  -0.506  HB12  C5B  17  
C5B  HB21  1HB2  H  0  0  N  N  N  20.322  -2.889  51.620  -0.516   3.358  -2.856  HB21  C5B  18  
C5B  HB22  2HB2  H  0  0  N  N  N  19.242  -4.051  52.380  -1.304   2.894  -4.378  HB22  C5B  19  
C5B  HG21  1HG2  H  0  0  N  N  N  21.809  -3.577  53.326  -1.148   0.565  -3.869  HG21  C5B  20  
C5B  HG22  2HG2  H  0  0  N  N  N  21.041  -5.136  53.539   0.380   1.171  -3.220  HG22  C5B  21  
C5B  HD    HD    H  0  1  N  N  N  23.040  -4.261  51.381  -1.617  -0.204  -1.746  HD    C5B  22  
C5B  HOZ2  HOZ2  H  0  0  N  N  N  23.494  -7.656  53.252   0.423  -0.115   0.902  HOZ2  C5B  23  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C5B  N    CA    SING  N  N   1  
C5B  N    HN1   SING  N  N   2  
C5B  N    HN2   SING  N  N   3  
C5B  CA   C     SING  N  N   4  
C5B  CA   CB1   SING  N  N   5  
C5B  CA   CB2   SING  N  N   6  
C5B  C    O     DOUB  N  N   7  
C5B  C    OXT   SING  N  N   8  
C5B  OXT  HOXT  SING  N  N   9  
C5B  CB1  CD    SING  N  N  10  
C5B  CB1  HB11  SING  N  N  11  
C5B  CB1  HB12  SING  N  N  12  
C5B  CB2  CG2   SING  N  N  13  
C5B  CB2  HB21  SING  N  N  14  
C5B  CB2  HB22  SING  N  N  15  
C5B  CG2  CD    SING  N  N  16  
C5B  CG2  HG21  SING  N  N  17  
C5B  CG2  HG22  SING  N  N  18  
C5B  CD   CE    SING  N  N  19  
C5B  CD   HD    SING  N  N  20  
C5B  CE   OZ1   DOUB  N  N  21  
C5B  CE   OZ2   SING  N  N  22  
C5B  OZ2  HOZ2  SING  N  N  23  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C5B  SMILES            ACDLabs               10.04  "O=C(O)C1(N)CC(C(=O)O)CC1"  
C5B  SMILES_CANONICAL  CACTVS                3.341  "N[C@]1(CC[C@H](C1)C(O)=O)C(O)=O"  
C5B  SMILES            CACTVS                3.341  "N[C]1(CC[CH](C1)C(O)=O)C(O)=O"  
C5B  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C1C[C@](C[C@@H]1C(=O)O)(C(=O)O)N"  
C5B  SMILES            "OpenEye OEToolkits"  1.5.0  "C1CC(CC1C(=O)O)(C(=O)O)N"  
C5B  InChI             InChI                 1.03   "InChI=1S/C7H11NO4/c8-7(6(11)12)2-1-4(3-7)5(9)10/h4H,1-3,8H2,(H,9,10)(H,11,12)/t4-,7+/m1/s1"  
C5B  InChIKey          InChI                 1.03   YFYNOWXBIBKGHB-FBCQKBJTSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
C5B  "SYSTEMATIC NAME"  ACDLabs               10.04  "(1S,3R)-1-aminocyclopentane-1,3-dicarboxylic acid"  
C5B  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(1S,3R)-1-aminocyclopentane-1,3-dicarboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C5B  "Create component"   2006-12-26  RCSB  
C5B  "Modify descriptor"  2011-06-04  RCSB  
C5B  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     C5B
_pdbx_chem_comp_synonyms.name        "1S,3R-ACPD"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
