data_8LB
# 
_chem_comp.id                                    8LB 
_chem_comp.name                                  "(2~{S})-6-azanyl-2-[[(2~{S})-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]hexanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H35 N4 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-02-09 
_chem_comp.pdbx_modified_date                    2017-06-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        486.499 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8LB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5N31 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8LB C10 C1  C 0 1 N N N 38.268 36.418 -1.230  4.621  -4.167 -1.016 C10 8LB 1  
8LB C11 C2  C 0 1 N N N 39.401 35.418 -1.424  3.628  -4.913 -1.909 C11 8LB 2  
8LB C12 C3  C 0 1 N N N 38.021 37.665 -5.516  5.119  -0.491 2.302  C12 8LB 3  
8LB C13 C4  C 0 1 N N N 34.214 40.269 -6.874  -1.808 2.556  0.479  C13 8LB 4  
8LB C14 C5  C 0 1 N N N 33.567 39.929 -9.270  -3.662 0.994  0.727  C14 8LB 5  
8LB C15 C6  C 0 1 N N N 32.591 39.959 -11.447 -5.401 -0.592 1.118  C15 8LB 6  
8LB C16 C7  C 0 1 Y N N 31.064 39.815 -11.576 -6.687 -1.065 0.490  C16 8LB 7  
8LB C19 C8  C 0 1 Y N N 28.297 39.535 -11.790 -9.046 -1.931 -0.662 C19 8LB 8  
8LB C20 C9  C 0 1 Y N N 28.989 40.306 -12.716 -9.063 -0.891 0.248  C20 8LB 9  
8LB C21 C10 C 0 1 Y N N 30.371 40.449 -12.604 -7.884 -0.458 0.824  C21 8LB 10 
8LB O01 O1  O 0 1 N N N 36.265 42.141 -6.615  -0.444 0.274  -0.013 O01 8LB 11 
8LB P01 P1  P 0 1 N N N 34.914 41.744 -6.028  -0.415 1.716  -0.344 P01 8LB 12 
8LB N01 N1  N 0 1 N N N 35.126 41.233 -4.430  1.036  2.384  0.188  N01 8LB 13 
8LB C01 C11 C 0 1 N N S 36.266 41.743 -3.675  2.185  1.652  -0.362 C01 8LB 14 
8LB C02 C12 C 0 1 N N N 35.903 41.649 -2.201  3.317  2.635  -0.666 C02 8LB 15 
8LB C03 C13 C 0 1 N N N 36.976 42.179 -1.257  2.879  3.589  -1.779 C03 8LB 16 
8LB C04 C14 C 0 1 N N N 36.690 41.782 0.188   3.949  4.664  -1.980 C04 8LB 17 
8LB C05 C15 C 0 1 N N N 37.147 43.690 -1.362  2.694  2.805  -3.080 C05 8LB 18 
8LB C06 C16 C 0 1 N N N 37.498 40.899 -3.938  2.659  0.635  0.643  C06 8LB 19 
8LB N02 N2  N 0 1 N N N 37.265 39.532 -4.179  3.710  -0.159 0.354  N02 8LB 20 
8LB C07 C17 C 0 1 N N S 38.378 38.645 -4.407  4.172  -1.148 1.331  C07 8LB 21 
8LB O02 O2  O 0 1 N N N 36.832 37.630 -5.963  5.381  0.683  2.189  O02 8LB 22 
8LB O03 O3  O 0 1 N N N 38.937 36.919 -5.962  5.671  -1.211 3.292  O03 8LB 23 
8LB O04 O4  O 0 1 N N N 38.622 41.343 -3.885  2.096  0.529  1.712  O04 8LB 24 
8LB O05 O5  O 0 1 N N N 33.924 42.897 -6.152  -0.540 1.904  -1.938 O05 8LB 25 
8LB N04 N3  N 0 1 N N N 33.581 40.700 -8.094  -3.071 1.975  0.016  N04 8LB 26 
8LB O06 O6  O 0 1 N N N 32.924 40.637 -10.268 -4.822 0.460  0.302  O06 8LB 27 
8LB C17 C18 C 0 1 Y N N 30.365 39.066 -10.639 -6.670 -2.101 -0.424 C17 8LB 28 
8LB C18 C19 C 0 1 Y N N 28.993 38.922 -10.747 -7.850 -2.534 -1.001 C18 8LB 29 
8LB O07 O7  O 0 1 N N N 34.063 38.857 -9.347  -3.147 0.592  1.752  O07 8LB 30 
8LB C08 C20 C 0 1 N N N 38.846 37.963 -3.132  4.893  -2.284 0.604  C08 8LB 31 
8LB C09 C21 C 0 1 N N N 37.787 37.060 -2.547  3.900  -3.030 -0.289 C09 8LB 32 
8LB H1  H1  H 0 1 N N N 38.619 37.217 -0.560  5.042  -4.857 -0.285 H1  8LB 33 
8LB H2  H2  H 0 1 N N N 37.418 35.897 -0.765  5.423  -3.755 -1.629 H2  8LB 34 
8LB H3  H3  H 0 1 N N N 39.940 35.491 -2.380  2.826  -5.325 -1.296 H3  8LB 35 
8LB H4  H4  H 0 1 N N N 40.126 35.356 -0.599  3.208  -4.223 -2.641 H4  8LB 36 
8LB H6  H6  H 0 1 N N N 33.472 39.784 -6.222  -1.723 2.429  1.558  H6  8LB 37 
8LB H7  H7  H 0 1 N N N 35.020 39.557 -7.105  -1.787 3.618  0.236  H7  8LB 38 
8LB H8  H8  H 0 1 N N N 33.048 38.959 -11.430 -5.605 -0.207 2.117  H8  8LB 39 
8LB H9  H9  H 0 1 N N N 32.975 40.523 -12.309 -4.702 -1.426 1.186  H9  8LB 40 
8LB H10 H10 H 0 1 N N N 27.228 39.411 -11.877 -9.968 -2.269 -1.113 H10 8LB 41 
8LB H11 H11 H 0 1 N N N 28.458 40.793 -13.520 -9.998 -0.417 0.509  H11 8LB 42 
8LB H12 H12 H 0 1 N N N 30.908 41.055 -13.319 -7.897 0.355  1.536  H12 8LB 43 
8LB H13 H13 H 0 1 N N N 34.301 41.491 -3.927  1.088  3.365  -0.043 H13 8LB 44 
8LB H14 H14 H 0 1 N N N 36.469 42.791 -3.941  1.887  1.145  -1.280 H14 8LB 45 
8LB H15 H15 H 0 1 N N N 34.982 42.227 -2.035  3.552  3.207  0.231  H15 8LB 46 
8LB H16 H16 H 0 1 N N N 35.721 40.592 -1.957  4.200  2.083  -0.987 H16 8LB 47 
8LB H17 H17 H 0 1 N N N 37.931 41.716 -1.546  1.936  4.062  -1.503 H17 8LB 48 
8LB H18 H18 H 0 1 N N N 37.481 42.179 0.841   4.891  4.192  -2.256 H18 8LB 49 
8LB H19 H19 H 0 1 N N N 35.718 42.195 0.496   3.636  5.344  -2.773 H19 8LB 50 
8LB H20 H20 H 0 1 N N N 36.664 40.685 0.269   4.080  5.223  -1.053 H20 8LB 51 
8LB H21 H21 H 0 1 N N N 37.930 44.020 -0.663  3.637  2.332  -3.356 H21 8LB 52 
8LB H22 H22 H 0 1 N N N 37.437 43.956 -2.389  1.932  2.039  -2.937 H22 8LB 53 
8LB H23 H23 H 0 1 N N N 36.198 44.185 -1.109  2.382  3.484  -3.873 H23 8LB 54 
8LB H24 H24 H 0 1 N N N 36.330 39.177 -4.192  4.161  -0.074 -0.501 H24 8LB 55 
8LB H25 H25 H 0 1 N N N 39.221 39.249 -4.774  3.316  -1.549 1.874  H25 8LB 56 
8LB H26 H26 H 0 1 N N N 38.588 36.365 -6.650  6.272  -0.746 3.890  H26 8LB 57 
8LB H27 H27 H 0 1 N N N 34.349 43.636 -6.572  -0.452 2.821  -2.234 H27 8LB 58 
8LB H28 H28 H 0 1 N N N 33.129 41.592 -8.105  -3.482 2.296  -0.802 H28 8LB 59 
8LB H29 H29 H 0 1 N N N 30.893 38.594 -9.824  -5.735 -2.573 -0.688 H29 8LB 60 
8LB H30 H30 H 0 1 N N N 28.457 38.331 -10.019 -7.837 -3.347 -1.712 H30 8LB 61 
8LB H31 H31 H 0 1 N N N 39.739 37.362 -3.359  5.695  -1.872 -0.009 H31 8LB 62 
8LB H32 H32 H 0 1 N N N 39.102 38.735 -2.391  5.313  -2.975 1.336  H32 8LB 63 
8LB H33 H33 H 0 1 N N N 36.881 37.651 -2.348  3.480  -2.340 -1.020 H33 8LB 64 
8LB H34 H34 H 0 1 N N N 37.554 36.264 -3.270  3.098  -3.442 0.324  H34 8LB 65 
8LB N1  N4  N 0 1 N N N ?      ?      ?       4.321  -6.004 -2.607 N1  8LB 66 
8LB H5  H5  H 0 1 N N N ?      ?      ?       4.774  -6.623 -1.951 H5  8LB 67 
8LB H35 H35 H 0 1 N N N ?      ?      ?       3.686  -6.512 -3.204 H35 8LB 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8LB C20 C21 DOUB Y N 1  
8LB C20 C19 SING Y N 2  
8LB C21 C16 SING Y N 3  
8LB C19 C18 DOUB Y N 4  
8LB C16 C15 SING N N 5  
8LB C16 C17 DOUB Y N 6  
8LB C15 O06 SING N N 7  
8LB C18 C17 SING Y N 8  
8LB O06 C14 SING N N 9  
8LB O07 C14 DOUB N N 10 
8LB C14 N04 SING N N 11 
8LB N04 C13 SING N N 12 
8LB C13 P01 SING N N 13 
8LB O01 P01 DOUB N N 14 
8LB O05 P01 SING N N 15 
8LB P01 N01 SING N N 16 
8LB O02 C12 DOUB N N 17 
8LB O03 C12 SING N N 18 
8LB C12 C07 SING N N 19 
8LB N01 C01 SING N N 20 
8LB C07 N02 SING N N 21 
8LB C07 C08 SING N N 22 
8LB N02 C06 SING N N 23 
8LB C06 O04 DOUB N N 24 
8LB C06 C01 SING N N 25 
8LB C01 C02 SING N N 26 
8LB C08 C09 SING N N 27 
8LB C09 C10 SING N N 28 
8LB C02 C03 SING N N 29 
8LB C11 C10 SING N N 30 
8LB C05 C03 SING N N 31 
8LB C03 C04 SING N N 32 
8LB C10 H1  SING N N 33 
8LB C10 H2  SING N N 34 
8LB C11 H3  SING N N 35 
8LB C11 H4  SING N N 36 
8LB C13 H6  SING N N 37 
8LB C13 H7  SING N N 38 
8LB C15 H8  SING N N 39 
8LB C15 H9  SING N N 40 
8LB C19 H10 SING N N 41 
8LB C20 H11 SING N N 42 
8LB C21 H12 SING N N 43 
8LB N01 H13 SING N N 44 
8LB C01 H14 SING N N 45 
8LB C02 H15 SING N N 46 
8LB C02 H16 SING N N 47 
8LB C03 H17 SING N N 48 
8LB C04 H18 SING N N 49 
8LB C04 H19 SING N N 50 
8LB C04 H20 SING N N 51 
8LB C05 H21 SING N N 52 
8LB C05 H22 SING N N 53 
8LB C05 H23 SING N N 54 
8LB N02 H24 SING N N 55 
8LB C07 H25 SING N N 56 
8LB O03 H26 SING N N 57 
8LB O05 H27 SING N N 58 
8LB N04 H28 SING N N 59 
8LB C17 H29 SING N N 60 
8LB C18 H30 SING N N 61 
8LB C08 H31 SING N N 62 
8LB C08 H32 SING N N 63 
8LB C09 H33 SING N N 64 
8LB C09 H34 SING N N 65 
8LB C11 N1  SING N N 66 
8LB N1  H5  SING N N 67 
8LB N1  H35 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8LB InChI            InChI                1.03  
"InChI=1S/C21H35N4O7P/c1-15(2)12-18(19(26)24-17(20(27)28)10-6-7-11-22)25-33(30,31)14-23-21(29)32-13-16-8-4-3-5-9-16/h3-5,8-9,15,17-18H,6-7,10-14,22H2,1-2H3,(H,23,29)(H,24,26)(H,27,28)(H2,25,30,31)/t17-,18-/m0/s1" 
8LB InChIKey         InChI                1.03  QNYUXDGTIPHQBZ-ROUUACIJSA-N 
8LB SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[C@@H](CCCCN)C(O)=O" 
8LB SMILES           CACTVS               3.385 "CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[CH](CCCCN)C(O)=O" 
8LB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(C)C[C@@H](C(=O)N[C@@H](CCCCN)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O" 
8LB SMILES           "OpenEye OEToolkits" 2.0.6 "CC(C)CC(C(=O)NC(CCCCN)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8LB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-6-azanyl-2-[[(2~{S})-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]hexanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8LB "Create component" 2017-02-09 EBI  
8LB "Initial release"  2017-06-21 RCSB 
# 
