data_7RB
# 
_chem_comp.id                                    7RB 
_chem_comp.name                                  "2-[2-(4-benzylpiperidin-1-yl)-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]-N-(3-chloropyridin-4-yl)acetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H25 Cl N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-08-19 
_chem_comp.pdbx_modified_date                    2022-08-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        476.958 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7RB 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RV5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7RB C11  C1  C  0 1 N N N -11.000 -1.843 15.183 -2.651 0.922  -1.808 C11  7RB 1  
7RB C13  C2  C  0 1 Y N N -10.010 0.263  14.490 -3.132 3.363  -1.432 C13  7RB 2  
7RB C14  C3  C  0 1 Y N N -10.019 0.980  13.308 -2.543 4.422  -0.851 C14  7RB 3  
7RB C15  C4  C  0 1 Y N N -10.811 0.237  12.394 -1.267 3.950  -0.315 C15  7RB 4  
7RB C16  C5  C  0 1 Y N N -11.216 -0.875 13.002 -1.188 2.586  -0.628 C16  7RB 5  
7RB C18  C6  C  0 1 N N N -12.470 -1.610 10.968 0.875  2.462  0.408  C18  7RB 6  
7RB C20  C7  C  0 1 N N N -13.761 -3.751 11.000 3.134  2.332  1.398  C20  7RB 7  
7RB C21  C8  C  0 1 N N N -15.224 -3.457 11.270 4.383  1.942  0.602  C21  7RB 8  
7RB C22  C9  C  0 1 N N N -15.654 -2.213 10.579 4.464  0.417  0.501  C22  7RB 9  
7RB C23  C10 C  0 1 N N N -17.121 -1.773 10.841 5.729  0.023  -0.264 C23  7RB 10 
7RB C24  C11 C  0 1 Y N N -17.978 -2.834 11.559 5.873  -1.478 -0.257 C24  7RB 11 
7RB C25  C12 C  0 1 Y N N -18.324 -2.637 12.905 5.306  -2.231 -1.268 C25  7RB 12 
7RB O34  O1  O  0 1 N N N -10.878 1.444  10.411 -0.237 5.739  0.678  O34  7RB 13 
7RB C02  C13 C  0 1 N N N -12.495 -1.873 15.516 -3.281 0.103  -0.712 C02  7RB 14 
7RB C04  C14 C  0 1 Y N N -14.384 -3.206 16.521 -4.351 -1.887 0.023  C04  7RB 15 
7RB C05  C15 C  0 1 Y N N -15.447 -2.840 15.745 -5.240 -1.249 0.887  C05  7RB 16 
7RB C06  C16 C  0 1 Y N N -16.767 -3.059 16.159 -5.908 -1.996 1.834  C06  7RB 17 
7RB C08  C17 C  0 1 Y N N -15.996 -4.043 18.110 -4.883 -3.940 1.131  C08  7RB 18 
7RB C09  C18 C  0 1 Y N N -14.672 -3.843 17.748 -4.175 -3.264 0.156  C09  7RB 19 
7RB C26  C19 C  0 1 Y N N -19.120 -3.603 13.577 5.437  -3.607 -1.262 C26  7RB 20 
7RB C27  C20 C  0 1 Y N N -19.553 -4.733 12.896 6.136  -4.230 -0.245 C27  7RB 21 
7RB C28  C21 C  0 1 Y N N -19.200 -4.936 11.578 6.704  -3.477 0.766  C28  7RB 22 
7RB C29  C22 C  0 1 Y N N -18.402 -3.960 10.888 6.577  -2.100 0.757  C29  7RB 23 
7RB C30  C23 C  0 1 N N N -15.252 -2.085 9.161  3.234  -0.113 -0.241 C30  7RB 24 
7RB C31  C24 C  0 1 N N N -13.782 -2.463 8.963  1.971  0.254  0.546  C31  7RB 25 
7RB C33  C25 C  0 1 N N N -11.235 0.446  10.968 -0.202 4.555  0.388  C33  7RB 26 
7RB N03  N1  N  0 1 N N N -13.069 -3.019 16.142 -3.660 -1.168 -0.953 N03  7RB 27 
7RB N07  N2  N  0 1 Y N N -17.000 -3.664 17.336 -5.715 -3.298 1.929  N07  7RB 28 
7RB N12  N3  N  0 1 Y N N -10.713 -0.850 14.280 -2.331 2.257  -1.298 N12  7RB 29 
7RB N17  N4  N  0 1 N N N -12.084 -1.839 12.303 -0.107 1.889  -0.249 N17  7RB 30 
7RB N19  N5  N  0 1 N N N -13.266 -2.601 10.304 1.961  1.706  0.773  N19  7RB 31 
7RB N32  N6  N  0 1 N N N -12.028 -0.448 10.269 0.857  3.787  0.730  N32  7RB 32 
7RB O01  O2  O  0 1 N N N -13.212 -0.883 15.252 -3.446 0.586  0.388  O01  7RB 33 
7RB CL10 CL1 CL 0 0 N N N -13.401 -4.379 18.819 -3.083 -4.117 -0.889 CL10 7RB 34 
7RB H1   H1  H  0 1 N N N -10.708 -2.813 14.754 -1.737 0.434  -2.147 H1   7RB 35 
7RB H2   H2  H  0 1 N N N -10.430 -1.664 16.107 -3.347 1.009  -2.643 H2   7RB 36 
7RB H3   H3  H  0 1 N N N -9.524  0.551  15.411 -4.093 3.379  -1.925 H3   7RB 37 
7RB H4   H4  H  0 1 N N N -9.522  1.920  13.118 -2.934 5.426  -0.793 H4   7RB 38 
7RB H5   H5  H  0 1 N N N -13.658 -4.652 10.378 3.231  1.982  2.425  H5   7RB 39 
7RB H6   H6  H  0 1 N N N -13.216 -3.894 11.945 3.020  3.416  1.390  H6   7RB 40 
7RB H7   H7  H  0 1 N N N -15.373 -3.337 12.353 4.326  2.370  -0.399 H7   7RB 41 
7RB H8   H8  H  0 1 N N N -15.833 -4.298 10.908 5.271  2.321  1.109  H8   7RB 42 
7RB H9   H9  H  0 1 N N N -15.071 -1.428 11.082 4.496  -0.012 1.502  H9   7RB 43 
7RB H10  H10 H  0 1 N N N -17.104 -0.865 11.462 5.657  0.376  -1.292 H10  7RB 44 
7RB H11  H11 H  0 1 N N N -17.592 -1.546 9.873  6.598  0.473  0.215  H11  7RB 45 
7RB H12  H12 H  0 1 N N N -17.986 -1.754 13.428 4.759  -1.744 -2.063 H12  7RB 46 
7RB H13  H13 H  0 1 N N N -15.265 -2.371 14.789 -5.403 -0.184 0.815  H13  7RB 47 
7RB H14  H14 H  0 1 N N N -17.592 -2.744 15.537 -6.598 -1.509 2.508  H14  7RB 48 
7RB H15  H15 H  0 1 N N N -16.214 -4.523 19.053 -4.753 -5.006 1.242  H15  7RB 49 
7RB H16  H16 H  0 1 N N N -19.387 -3.459 14.613 4.994  -4.195 -2.052 H16  7RB 50 
7RB H17  H17 H  0 1 N N N -20.171 -5.459 13.403 6.239  -5.305 -0.241 H17  7RB 51 
7RB H18  H18 H  0 1 N N N -19.524 -5.829 11.064 7.250  -3.963 1.560  H18  7RB 52 
7RB H19  H19 H  0 1 N N N -18.137 -4.108 9.852  7.023  -1.511 1.544  H19  7RB 53 
7RB H20  H20 H  0 1 N N N -15.401 -1.044 8.839  3.187  0.335  -1.233 H20  7RB 54 
7RB H21  H21 H  0 1 N N N -15.879 -2.751 8.549  3.303  -1.196 -0.333 H21  7RB 55 
7RB H22  H22 H  0 1 N N N -13.694 -3.411 8.412  1.089  -0.033 -0.025 H22  7RB 56 
7RB H23  H23 H  0 1 N N N -13.246 -1.672 8.419  1.974  -0.266 1.504  H23  7RB 57 
7RB H24  H24 H  0 1 N N N -12.445 -3.778 16.329 -3.453 -1.582 -1.805 H24  7RB 58 
7RB H25  H25 H  0 1 N N N -12.280 -0.286 9.315  1.602  4.178  1.213  H25  7RB 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7RB C31 C30  SING N N 1  
7RB C31 N19  SING N N 2  
7RB C30 C22  SING N N 3  
7RB N32 C33  SING N N 4  
7RB N32 C18  SING N N 5  
7RB N19 C18  SING N N 6  
7RB N19 C20  SING N N 7  
7RB O34 C33  DOUB N N 8  
7RB C22 C23  SING N N 9  
7RB C22 C21  SING N N 10 
7RB C23 C24  SING N N 11 
7RB C29 C24  DOUB Y N 12 
7RB C29 C28  SING Y N 13 
7RB C33 C15  SING N N 14 
7RB C18 N17  DOUB N N 15 
7RB C20 C21  SING N N 16 
7RB C24 C25  SING Y N 17 
7RB C28 C27  DOUB Y N 18 
7RB N17 C16  SING N N 19 
7RB C15 C16  DOUB Y N 20 
7RB C15 C14  SING Y N 21 
7RB C27 C26  SING Y N 22 
7RB C25 C26  DOUB Y N 23 
7RB C16 N12  SING Y N 24 
7RB C14 C13  DOUB Y N 25 
7RB N12 C13  SING Y N 26 
7RB N12 C11  SING N N 27 
7RB C11 C02  SING N N 28 
7RB O01 C02  DOUB N N 29 
7RB C02 N03  SING N N 30 
7RB C05 C06  DOUB Y N 31 
7RB C05 C04  SING Y N 32 
7RB N03 C04  SING N N 33 
7RB C06 N07  SING Y N 34 
7RB C04 C09  DOUB Y N 35 
7RB N07 C08  DOUB Y N 36 
7RB C09 C08  SING Y N 37 
7RB C09 CL10 SING N N 38 
7RB C11 H1   SING N N 39 
7RB C11 H2   SING N N 40 
7RB C13 H3   SING N N 41 
7RB C14 H4   SING N N 42 
7RB C20 H5   SING N N 43 
7RB C20 H6   SING N N 44 
7RB C21 H7   SING N N 45 
7RB C21 H8   SING N N 46 
7RB C22 H9   SING N N 47 
7RB C23 H10  SING N N 48 
7RB C23 H11  SING N N 49 
7RB C25 H12  SING N N 50 
7RB C05 H13  SING N N 51 
7RB C06 H14  SING N N 52 
7RB C08 H15  SING N N 53 
7RB C26 H16  SING N N 54 
7RB C27 H17  SING N N 55 
7RB C28 H18  SING N N 56 
7RB C29 H19  SING N N 57 
7RB C30 H20  SING N N 58 
7RB C30 H21  SING N N 59 
7RB C31 H22  SING N N 60 
7RB C31 H23  SING N N 61 
7RB N03 H24  SING N N 62 
7RB N32 H25  SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7RB SMILES           ACDLabs              12.01 "Clc1cnccc1NC(=O)Cn1ccc2C(=O)NC(=Nc12)N1CCC(CC1)Cc1ccccc1"                                                                                                                                          
7RB InChI            InChI                1.03  "InChI=1S/C25H25ClN6O2/c26-20-15-27-10-6-21(20)28-22(33)16-32-13-9-19-23(32)29-25(30-24(19)34)31-11-7-18(8-12-31)14-17-4-2-1-3-5-17/h1-6,9-10,13,15,18H,7-8,11-12,14,16H2,(H,27,28,33)(H,29,30,34)" 
7RB InChIKey         InChI                1.03  QBLKKMXYNIFVME-UHFFFAOYSA-N                                                                                                                                                                         
7RB SMILES_CANONICAL CACTVS               3.385 "Clc1cnccc1NC(=O)Cn2ccc3C(=O)NC(=Nc23)N4CCC(CC4)Cc5ccccc5"                                                                                                                                          
7RB SMILES           CACTVS               3.385 "Clc1cnccc1NC(=O)Cn2ccc3C(=O)NC(=Nc23)N4CCC(CC4)Cc5ccccc5"                                                                                                                                          
7RB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2CCN(CC2)C3=Nc4c(ccn4CC(=O)Nc5ccncc5Cl)C(=O)N3"                                                                                                                                        
7RB SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CC2CCN(CC2)C3=Nc4c(ccn4CC(=O)Nc5ccncc5Cl)C(=O)N3"                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7RB "SYSTEMATIC NAME" ACDLabs              12.01 "2-[2-(4-benzylpiperidin-1-yl)-4-oxo-3,4-dihydro-7H-pyrrolo[2,3-d]pyrimidin-7-yl]-N-(3-chloropyridin-4-yl)acetamide"                 
7RB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(3-chloranylpyridin-4-yl)-2-[4-oxidanylidene-2-[4-(phenylmethyl)piperidin-1-yl]-3~{H}-pyrrolo[2,3-d]pyrimidin-7-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7RB "Create component" 2021-08-19 RCSB 
7RB "Initial release"  2022-08-24 RCSB 
# 
