data_9BA
# 
_chem_comp.id                                    9BA 
_chem_comp.name                                  "N-{(3R,6S,9S,12R)-6-ethyl-12-methyl-9-[3-(N'-methylcarbamimidamido)propyl]-2,5,8,11-tetraoxo-3-phenyl-1,4,7,10-tetraazacyclotetradecan-12-yl}-2-methylpropanamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H44 N8 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-04-17 
_chem_comp.pdbx_modified_date                    2017-06-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        572.700 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9BA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5VFC 
_chem_comp.pdbx_subcomponent_list                "NMM ABA 9BP PG9" 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9BA C15 C18 C 0 1 N N N 25.035 -2.643  18.693 9.031  -2.001 1.909  CAA  NMM 1  
9BA N4  N4  N 0 1 N N N 24.164 -3.689  19.212 8.044  -1.486 0.957  NH2  NMM 2  
9BA C14 C16 C 0 1 N N N 23.112 -3.349  20.095 6.721  -1.840 1.080  CZ   NMM 3  
9BA N5  N5  N 0 1 N N N 23.106 -2.218  20.737 6.346  -2.634 2.043  NH1  NMM 4  
9BA N3  N1  N 0 1 N N N 22.091 -4.303  20.182 5.795  -1.356 0.187  NE   NMM 5  
9BA C13 C1  C 0 1 N N N 20.944 -4.181  21.032 4.385  -1.734 0.317  CD   NMM 6  
9BA C12 C2  C 0 1 N N N 21.217 -4.673  22.450 3.573  -1.064 -0.794 CG   NMM 7  
9BA C11 C3  C 0 1 N N N 21.465 -6.166  22.435 2.101  -1.459 -0.657 CB   NMM 8  
9BA C10 C6  C 0 1 N N S 21.486 -6.694  23.872 1.289  -0.789 -1.768 CA   NMM 9  
9BA C27 C28 C 0 1 N N N 20.123 -6.491  24.549 -0.142 -1.255 -1.699 C    NMM 10 
9BA O3  O5  O 0 1 N N N 19.862 -5.454  25.169 -1.015 -0.674 -2.309 O    NMM 11 
9BA N2  N2  N 0 1 N N N 21.930 -8.082  23.878 1.318  0.679  -1.589 N    NMM 12 
9BA N7  N7  N 0 1 N N N 19.216 -7.477  24.417 -0.435 -2.353 -0.929 N    ABA 13 
9BA C24 C13 C 0 1 N N S 17.863 -7.349  24.986 -1.876 -2.718 -0.922 CA   ABA 14 
9BA C23 C12 C 0 1 N N N 17.850 -7.858  26.432 -2.549 -1.953 0.189  C    ABA 15 
9BA O4  O3  O 0 1 N N N 16.755 -7.898  27.024 -2.368 -2.261 1.348  O    ABA 16 
9BA C25 C26 C 0 1 N N N 16.933 -8.240  24.136 -2.026 -4.221 -0.679 CB   ABA 17 
9BA C26 C27 C 0 1 N N N 16.952 -7.797  22.659 -1.424 -4.990 -1.856 CG   ABA 18 
9BA O1  O1  O 0 1 N N N 19.879 -10.274 24.510 2.401  2.065  0.816  O1   9BP 19 
9BA C6  C4  C 0 1 N N N 19.108 -12.817 23.419 4.880  3.006  0.889  C6   9BP 20 
9BA C7  C5  C 0 1 N N N 19.469 -10.989 21.703 4.490  3.321  -1.559 C7   9BP 21 
9BA C9  C7  C 0 1 N N N 22.137 -8.700  25.073 0.278  1.210  -0.882 C9   9BP 22 
9BA C8  C8  C 0 1 N N N 24.141 -9.966  24.538 -0.737 3.336  -1.657 C8   9BP 23 
9BA N1  N3  N 0 1 N N N 22.004 -10.920 23.984 1.573  3.262  -0.858 N1   9BP 24 
9BA C5  C9  C 0 1 N N N 20.122 -11.856 22.752 3.925  3.579  -0.160 C5   9BP 25 
9BA C4  C10 C 0 1 N N N 20.641 -10.948 23.827 2.579  2.914  -0.031 C4   9BP 26 
9BA C3  C11 C 0 1 N N R 22.701 -10.149 24.994 0.235  2.700  -0.661 C3   9BP 27 
9BA C2  C14 C 0 1 N N N 22.776 -10.838 26.381 -0.235 2.990  0.766  C2   9BP 28 
9BA C1  C15 C 0 1 N N N 21.491 -11.447 26.962 -1.760 2.892  0.831  C1   9BP 29 
9BA O2  O2  O 0 1 N N N 21.888 -8.121  26.123 -0.596 0.495  -0.441 O2   9BP 30 
9BA N   N8  N 0 1 N N N 20.454 -10.444 27.158 -2.138 1.455  0.832  N    9BP 31 
9BA N6  N6  N 0 1 N N N 19.044 -8.185  27.047 -3.366 -0.909 -0.131 N    PG9 32 
9BA C16 C17 C 0 1 N N R 19.122 -8.746  28.374 -3.973 -0.193 1.013  CA   PG9 33 
9BA C17 C19 C 0 1 Y N N 19.537 -7.650  29.359 -5.474 -0.209 0.881  CB   PG9 34 
9BA C18 C20 C 0 1 Y N N 18.880 -7.561  30.574 -6.265 -0.401 1.999  CG1  PG9 35 
9BA C19 C24 C 0 1 Y N N 19.210 -6.565  31.466 -7.641 -0.416 1.878  CD1  PG9 36 
9BA C20 C23 C 0 1 Y N N 20.197 -5.656  31.168 -8.228 -0.240 0.639  CE   PG9 37 
9BA C21 C22 C 0 1 Y N N 20.854 -5.703  29.960 -7.438 -0.048 -0.479 CD2  PG9 38 
9BA C22 C21 C 0 1 Y N N 20.532 -6.710  29.037 -6.061 -0.027 -0.357 CG2  PG9 39 
9BA C   C25 C 0 1 N N N 20.190 -9.852  28.370 -3.480 1.231  1.006  C    PG9 40 
9BA O   O4  O 0 1 N N N 20.716 -10.211 29.407 -4.251 2.157  1.150  O    PG9 41 
9BA H28 H28 H 0 1 N N N 25.789 -3.089  18.028 8.766  -1.682 2.917  HAA1 NMM 42 
9BA H29 H30 H 0 1 N N N 25.538 -2.137  19.530 9.045  -3.090 1.864  HAA2 NMM 43 
9BA H30 H29 H 0 1 N N N 24.435 -1.913  18.130 10.018 -1.615 1.654  HAA3 NMM 44 
9BA H27 H26 H 0 1 N N N 24.309 -4.642  18.946 8.324  -0.895 0.241  HH2  NMM 45 
9BA H31 H31 H 0 1 N N N 22.286 -2.111  21.300 5.412  -2.884 2.129  HH1  NMM 46 
9BA H26 H3  H 0 1 N N N 22.167 -5.123  19.614 6.074  -0.766 -0.530 HE   NMM 47 
9BA H25 H1  H 0 1 N N N 20.648 -3.123  21.076 4.290  -2.816 0.235  HD3  NMM 48 
9BA H24 H2  H 0 1 N N N 20.122 -4.774  20.604 4.010  -1.408 1.288  HD2  NMM 49 
9BA H23 H5  H 0 1 N N N 20.347 -4.454  23.087 3.669  0.018  -0.712 HG3  NMM 50 
9BA H22 H4  H 0 1 N N N 22.103 -4.159  22.851 3.948  -1.390 -1.764 HG2  NMM 51 
9BA H21 H7  H 0 1 N N N 22.433 -6.372  21.954 2.006  -2.541 -0.739 HB3  NMM 52 
9BA H20 H6  H 0 1 N N N 20.662 -6.665  21.872 1.726  -1.133 0.313  HB2  NMM 53 
9BA H   H14 H 0 1 N N N 22.221 -6.095  24.430 1.714  -1.048 -2.738 HA   NMM 54 
9BA H19 H18 H 0 1 N N N 22.080 -8.572  23.019 2.031  1.229  -1.950 H    NMM 55 
9BA H43 H44 H 0 1 N N N 19.465 -8.311  23.924 0.238  -2.847 -0.436 HN2  ABA 56 
9BA H2  H21 H 0 1 N N N 17.519 -6.305  24.950 -2.328 -2.452 -1.877 HA   ABA 57 
9BA H39 H40 H 0 1 N N N 17.272 -9.284  24.204 -1.506 -4.495 0.239  HB3  ABA 58 
9BA H38 H39 H 0 1 N N N 15.906 -8.162  24.523 -3.083 -4.469 -0.585 HB2  ABA 59 
9BA H40 H43 H 0 1 N N N 17.976 -7.876  22.266 -1.531 -6.061 -1.683 HG1  ABA 60 
9BA H42 H41 H 0 1 N N N 16.283 -8.445  22.073 -1.944 -4.716 -2.774 HG3  ABA 61 
9BA H41 H42 H 0 1 N N N 16.610 -6.754  22.585 -0.367 -4.741 -1.950 HG2  ABA 62 
9BA H10 H8  H 0 1 N N N 19.624 -13.428 24.174 5.853  3.487  0.796  H10  9BP 63 
9BA H12 H9  H 0 1 N N N 18.312 -12.232 23.902 4.478  3.190  1.885  H12  9BP 64 
9BA H11 H10 H 0 1 N N N 18.668 -13.474 22.654 4.989  1.933  0.734  H11  9BP 65 
9BA H15 H11 H 0 1 N N N 20.222 -10.324 21.256 5.463  3.802  -1.652 H15  9BP 66 
9BA H13 H12 H 0 1 N N N 19.032 -11.627 20.920 4.598  2.248  -1.714 H13  9BP 67 
9BA H14 H13 H 0 1 N N N 18.676 -10.385 22.168 3.809  3.729  -2.306 H14  9BP 68 
9BA H16 H15 H 0 1 N N N 24.693 -9.382  25.290 -0.336 3.243  -2.666 H16  9BP 69 
9BA H17 H16 H 0 1 N N N 24.616 -10.951 24.418 -1.700 2.827  -1.600 H17  9BP 70 
9BA H18 H17 H 0 1 N N N 24.156 -9.432  23.576 -0.869 4.390  -1.414 H18  9BP 71 
9BA H8  H19 H 0 1 N N N 22.555 -11.471 23.357 1.735  3.885  -1.583 H8   9BP 72 
9BA H9  H20 H 0 1 N N N 20.946 -12.435 22.309 3.816  4.653  -0.005 H9   9BP 73 
9BA H7  H22 H 0 1 N N N 23.514 -11.650 26.302 0.205  2.263  1.449  H7   9BP 74 
9BA H6  H23 H 0 1 N N N 23.134 -10.086 27.099 0.077  3.994  1.054  H6   9BP 75 
9BA H5  H24 H 0 1 N N N 21.117 -12.215 26.269 -2.120 3.367  1.744  H5   9BP 76 
9BA H4  H25 H 0 1 N N N 21.724 -11.911 27.932 -2.197 3.386  -0.036 H4   9BP 77 
9BA H3  H45 H 0 1 N N N 19.904 -10.171 26.368 -1.493 0.739  0.720  H3   9BP 78 
9BA H37 H34 H 0 1 N N N 19.895 -8.025  26.548 -3.539 -0.652 -1.050 H    PG9 79 
9BA H1  H27 H 0 1 N N N 18.154 -9.170  28.679 -3.683 -0.679 1.944  HA   PG9 80 
9BA H32 H33 H 0 1 N N N 18.108 -8.274  30.823 -5.806 -0.539 2.967  HG1  PG9 81 
9BA H33 H38 H 0 1 N N N 18.688 -6.497  32.409 -8.259 -0.566 2.751  HD1  PG9 82 
9BA H34 H37 H 0 1 N N N 20.460 -4.897  31.890 -9.304 -0.252 0.544  HE   PG9 83 
9BA H35 H36 H 0 1 N N N 21.612 -4.971  29.724 -7.897 0.089  -1.447 HD2  PG9 84 
9BA H36 H35 H 0 1 N N N 21.044 -6.763  28.088 -5.444 0.126  -1.230 HG2  PG9 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9BA C15 N4  SING N N 1  
9BA N4  C14 SING N N 2  
9BA C14 N3  SING N N 3  
9BA C14 N5  DOUB N N 4  
9BA N3  C13 SING N N 5  
9BA C13 C12 SING N N 6  
9BA C7  C5  SING N N 7  
9BA C11 C12 SING N N 8  
9BA C11 C10 SING N N 9  
9BA C26 C25 SING N N 10 
9BA C5  C6  SING N N 11 
9BA C5  C4  SING N N 12 
9BA C4  N1  SING N N 13 
9BA C4  O1  DOUB N N 14 
9BA C10 N2  SING N N 15 
9BA C10 C27 SING N N 16 
9BA N2  C9  SING N N 17 
9BA N1  C3  SING N N 18 
9BA C25 C24 SING N N 19 
9BA N7  C27 SING N N 20 
9BA N7  C24 SING N N 21 
9BA C8  C3  SING N N 22 
9BA C27 O3  DOUB N N 23 
9BA C24 C23 SING N N 24 
9BA C3  C9  SING N N 25 
9BA C3  C2  SING N N 26 
9BA C9  O2  DOUB N N 27 
9BA C2  C1  SING N N 28 
9BA C23 O4  DOUB N N 29 
9BA C23 N6  SING N N 30 
9BA C1  N   SING N N 31 
9BA N6  C16 SING N N 32 
9BA N   C   SING N N 33 
9BA C   C16 SING N N 34 
9BA C   O   DOUB N N 35 
9BA C16 C17 SING N N 36 
9BA C22 C17 DOUB Y N 37 
9BA C22 C21 SING Y N 38 
9BA C17 C18 SING Y N 39 
9BA C21 C20 DOUB Y N 40 
9BA C18 C19 DOUB Y N 41 
9BA C20 C19 SING Y N 42 
9BA C13 H25 SING N N 43 
9BA C13 H24 SING N N 44 
9BA N3  H26 SING N N 45 
9BA C12 H22 SING N N 46 
9BA C12 H23 SING N N 47 
9BA C11 H20 SING N N 48 
9BA C11 H21 SING N N 49 
9BA C6  H10 SING N N 50 
9BA C6  H12 SING N N 51 
9BA C6  H11 SING N N 52 
9BA C7  H15 SING N N 53 
9BA C7  H13 SING N N 54 
9BA C7  H14 SING N N 55 
9BA C10 H   SING N N 56 
9BA C8  H16 SING N N 57 
9BA C8  H17 SING N N 58 
9BA C8  H18 SING N N 59 
9BA N2  H19 SING N N 60 
9BA N1  H8  SING N N 61 
9BA C5  H9  SING N N 62 
9BA C24 H2  SING N N 63 
9BA C2  H7  SING N N 64 
9BA C2  H6  SING N N 65 
9BA C1  H5  SING N N 66 
9BA C1  H4  SING N N 67 
9BA N4  H27 SING N N 68 
9BA C16 H1  SING N N 69 
9BA C15 H28 SING N N 70 
9BA C15 H30 SING N N 71 
9BA C15 H29 SING N N 72 
9BA N5  H31 SING N N 73 
9BA C18 H32 SING N N 74 
9BA N6  H37 SING N N 75 
9BA C22 H36 SING N N 76 
9BA C21 H35 SING N N 77 
9BA C20 H34 SING N N 78 
9BA C19 H33 SING N N 79 
9BA C25 H38 SING N N 80 
9BA C25 H39 SING N N 81 
9BA C26 H42 SING N N 82 
9BA C26 H41 SING N N 83 
9BA C26 H40 SING N N 84 
9BA N7  H43 SING N N 85 
9BA N   H3  SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9BA SMILES           ACDLabs              12.01 "CN/C(NCCCC1NC(=O)C(C)(NC(=O)C(C)C)CCNC(C(NC(C(NC1=O)CC)=O)c2ccccc2)=O)=N" 
9BA InChI            InChI                1.03  
;InChI=1S/C28H44N8O5/c1-6-19-23(38)35-21(18-11-8-7-9-12-18)25(40)31-16-14-28(4,36-22(37)17(2)3)26(41)34-20(24(39)33-19)13-10-15-32-27(29)30-5/h7-9,11-12,17,19-21H,6,10,13-16H2,1-5H3,(H,31,40)(H,33,39)(H,34,41)(H,35,38)(H,36,37)(H3,29,30,32)/t19-,20-,21+,28+/m0/s1
;
9BA InChIKey         InChI                1.03  ZAIPJVQTYUSDTG-LDFBIXNTSA-N 
9BA SMILES_CANONICAL CACTVS               3.385 "CC[C@@H]1NC(=O)[C@H](CCCNC(=N)NC)NC(=O)[C@@](C)(CCNC(=O)[C@H](NC1=O)c2ccccc2)NC(=O)C(C)C" 
9BA SMILES           CACTVS               3.385 "CC[CH]1NC(=O)[CH](CCCNC(=N)NC)NC(=O)[C](C)(CCNC(=O)[CH](NC1=O)c2ccccc2)NC(=O)C(C)C" 
9BA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "[H]/N=C(\NC)/NCCC[C@H]1C(=O)N[C@H](C(=O)N[C@@H](C(=O)NCC[C@@](C(=O)N1)(C)NC(=O)C(C)C)c2ccccc2)CC" 
9BA SMILES           "OpenEye OEToolkits" 2.0.6 "CCC1C(=O)NC(C(=O)NCCC(C(=O)NC(C(=O)N1)CCCNC(=N)NC)(C)NC(=O)C(C)C)c2ccccc2" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9BA "SYSTEMATIC NAME" ACDLabs              12.01 "N-{(3R,6S,9S,12R)-6-ethyl-12-methyl-9-[3-(N'-methylcarbamimidamido)propyl]-2,5,8,11-tetraoxo-3-phenyl-1,4,7,10-tetraazacyclotetradecan-12-yl}-2-methylpropanamide"                                    
9BA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[(3~{R},6~{S},9~{S},12~{R})-6-ethyl-12-methyl-9-[3-[(~{N}-methylcarbamimidoyl)amino]propyl]-2,5,8,11-tetrakis(oxidanylidene)-3-phenyl-1,4,7,10-tetrazacyclotetradec-12-yl]-2-methyl-propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9BA "Create component"         2017-04-17 RCSB 
9BA "Modify subcomponent list" 2017-04-17 RCSB 
9BA "Initial release"          2017-06-28 RCSB 
# 
