data_5IA
# 
_chem_comp.id                                    5IA 
_chem_comp.name                                  "2-{[(2S)-6-[(Z)-(1-{[(2R,3R,4R,5R)-5-({[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-4-hydroxy-2-sulfanyloxolan-3-yl]oxy}tetradecylidene)amino]-2-{[(benzyloxy)carbonyl]amino}hexanoyl]amino}-N,N,N-triethylethan-1-aminium (non-preferred name)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C51 H86 N9 O16 P2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2021-07-20 
_chem_comp.pdbx_modified_date                    2024-08-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        1175.292 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5IA 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RIF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5IA C02 C1  C 0 1 N N R N N N 25.402 16.896 16.150 -0.599  -1.956  0.155  C02 5IA 1   
5IA C03 C2  C 0 1 N N R N N N 25.991 15.561 15.573 0.905   -1.607  0.102  C03 5IA 2   
5IA C04 C3  C 0 1 N N N N N N 25.689 15.476 14.040 1.429   -1.724  -1.331 C04 5IA 3   
5IA C11 C4  C 0 1 N N N N N N 27.187 19.510 8.828  9.155   -0.562  -2.878 C11 5IA 4   
5IA C12 C5  C 0 1 N N R N N N 27.097 19.267 7.235  10.020  0.250   -1.911 C12 5IA 5   
5IA C13 C6  C 0 1 N N S N N N 28.526 19.185 6.546  11.441  0.437   -2.488 C13 5IA 6   
5IA C15 C7  C 0 1 N N R N N N 28.864 20.653 6.009  12.364  0.339   -1.253 C15 5IA 7   
5IA C17 C8  C 0 1 N N R N N N 27.433 21.016 5.655  11.392  0.103   -0.075 C17 5IA 8   
5IA C19 C9  C 0 1 Y N N N N N 26.583 23.221 4.690  12.833  -0.497  1.917  C19 5IA 9   
5IA C21 C10 C 0 1 Y N N N N N 25.478 23.702 2.763  14.179  0.626   3.404  C21 5IA 10  
5IA C23 C11 C 0 1 Y N N N N N 25.922 25.571 4.197  13.996  -1.659  3.681  C23 5IA 11  
5IA C25 C12 C 0 1 Y N N N N N 26.557 24.597 5.090  13.130  -1.702  2.575  C25 5IA 12  
5IA C27 C13 C 0 1 Y N N N N N 27.611 23.450 6.697  11.778  -2.172  0.945  C27 5IA 13  
5IA C33 C14 C 0 1 N N R N N N 27.545 16.445 16.981 0.047   -0.146  1.651  C33 5IA 14  
5IA C35 C15 C 0 1 N N R N N N 26.161 17.022 17.490 -1.177  -0.972  1.197  C35 5IA 15  
5IA C37 C16 C 0 1 N N N N N N 25.754 16.222 19.794 -2.985  -2.174  2.146  C37 5IA 16  
5IA C38 C17 C 0 1 N N N N N N 26.224 17.426 20.716 -3.196  -3.654  1.956  C38 5IA 17  
5IA C39 C18 C 0 1 N N N N N N 25.070 18.389 21.216 -4.692  -3.940  1.804  C39 5IA 18  
5IA C40 C19 C 0 1 N N N N N N 25.369 19.913 20.952 -4.906  -5.443  1.612  C40 5IA 19  
5IA C41 C20 C 0 1 N N N N N N 25.953 20.747 22.156 -6.402  -5.729  1.460  C41 5IA 20  
5IA C42 C21 C 0 1 N N N N N N 26.778 22.053 21.743 -6.616  -7.232  1.267  C42 5IA 21  
5IA C43 C22 C 0 1 N N N N N N 26.617 23.329 22.674 -8.111  -7.518  1.115  C43 5IA 22  
5IA C44 C23 C 0 1 N N N N N N 26.807 24.711 21.938 -8.326  -9.020  0.923  C44 5IA 23  
5IA C45 C24 C 0 1 N N N N N N 25.496 25.347 21.265 -9.822  -9.307  0.771  C45 5IA 24  
5IA C46 C25 C 0 1 N N N N N N 25.541 25.539 19.687 -10.036 -10.809 0.578  C46 5IA 25  
5IA C47 C26 C 0 1 N N N N N N 24.178 25.270 18.898 -11.532 -11.095 0.427  C47 5IA 26  
5IA C48 C27 C 0 1 N N N N N N 23.090 26.420 18.916 -11.746 -12.598 0.234  C48 5IA 27  
5IA C49 C28 C 0 1 N N N N N N 22.281 26.668 20.249 -13.242 -12.884 0.082  C49 5IA 28  
5IA C50 C29 C 0 1 N N N N N N 22.347 28.145 20.726 -13.456 -14.387 -0.111 C50 5IA 29  
5IA C52 C30 C 0 1 N N N N N N 25.387 13.758 19.465 -3.785  0.075   2.196  C52 5IA 30  
5IA C53 C31 C 0 1 N N N N N N 25.657 12.381 20.206 -4.718  0.752   1.190  C53 5IA 31  
5IA C54 C32 C 0 1 N N N N N N 25.045 11.092 19.470 -4.497  2.266   1.228  C54 5IA 32  
5IA C55 C33 C 0 1 N N N N N N 24.220 10.125 20.444 -5.430  2.943   0.222  C55 5IA 33  
5IA C56 C34 C 0 1 N N S N N N 24.167 8.586  19.982 -5.208  4.456   0.260  C56 5IA 34  
5IA C58 C35 C 0 1 N N N N N N 23.335 6.339  21.054 -5.070  6.120   2.034  C58 5IA 35  
5IA C60 C36 C 0 1 N N N N N N 22.759 4.144  22.179 -4.817  7.836   3.674  C60 5IA 36  
5IA C61 C37 C 0 1 Y N N N N N 22.495 3.536  23.656 -5.347  8.212   5.034  C61 5IA 37  
5IA C62 C38 C 0 1 Y N N N N N 21.747 2.339  23.814 -4.709  7.761   6.174  C62 5IA 38  
5IA C63 C39 C 0 1 Y N N N N N 21.501 1.791  25.111 -5.196  8.106   7.421  C63 5IA 39  
5IA C64 C40 C 0 1 Y N N N N N 22.008 2.431  26.273 -6.320  8.903   7.528  C64 5IA 40  
5IA C65 C41 C 0 1 Y N N N N N 22.760 3.628  26.147 -6.958  9.354   6.387  C65 5IA 41  
5IA C66 C42 C 0 1 Y N N N N N 22.995 4.158  24.847 -6.469  9.013   5.140  C66 5IA 42  
5IA C68 C43 C 0 1 N N N N N N 25.657 7.947  19.903 -6.037  5.112   -0.815 C68 5IA 43  
5IA C70 C44 C 0 1 N N N N N N 27.552 6.731  18.558 -6.647  5.424   -3.153 C70 5IA 44  
5IA C71 C45 C 0 1 N N N N N N 27.486 5.125  18.761 -6.229  4.882   -4.522 C71 5IA 45  
5IA C73 C46 C 0 1 N N N N N N 29.892 4.518  18.039 -8.457  5.228   -5.339 C73 5IA 46  
5IA C74 C47 C 0 1 N N N N N N 29.217 4.036  16.711 -8.679  3.715   -5.378 C74 5IA 47  
5IA C75 C48 C 0 1 N N N N N N 29.449 5.327  20.434 -6.824  6.975   -5.533 C75 5IA 48  
5IA C76 C49 C 0 1 N N N N N N 28.711 5.097  21.783 -5.344  7.280   -5.772 C76 5IA 49  
5IA C77 C50 C 0 1 N N N N N N 28.654 2.923  19.664 -6.635  5.001   -6.883 C77 5IA 50  
5IA C78 C51 C 0 1 N N N N N N 30.026 2.141  19.844 -7.476  5.667   -7.974 C78 5IA 51  
5IA N18 N1  N 0 1 Y N N N N N 27.248 22.495 5.679  11.980  -0.825  0.894  N18 5IA 52  
5IA N20 N2  N 0 1 Y N N N N N 26.041 22.744 3.521  13.375  0.632   2.361  N20 5IA 53  
5IA N22 N3  N 0 1 Y N N N N N 25.390 25.072 3.031  14.486  -0.481  4.055  N22 5IA 54  
5IA N24 N4  N 0 1 N N N N N N 25.826 26.962 4.455  14.324  -2.814  4.369  N24 5IA 55  
5IA N26 N5  N 0 1 Y N N N N N 27.213 24.687 6.347  12.454  -2.685  1.933  N26 5IA 56  
5IA N51 N6  N 0 1 N N N N N N 25.809 14.973 20.296 -3.997  -1.374  2.159  N51 5IA 57  
5IA N57 N7  N 0 1 N N N N N N 23.351 7.804  21.002 -5.609  4.975   1.570  N57 5IA 58  
5IA N69 N8  N 0 1 N N N N N N 26.186 7.359  18.639 -5.842  4.787   -2.109 N69 5IA 59  
5IA N72 N9  N 1 1 N N N N N N 28.870 4.461  19.239 -7.036  5.521   -5.569 N72 5IA 60  
5IA O01 O1  O 0 1 N N N N N N 24.053 16.931 16.445 -0.785  -3.306  0.583  O01 5IA 61  
5IA O05 O2  O 0 1 N N N N N N 26.437 16.407 13.389 2.829   -1.439  -1.350 O05 5IA 62  
5IA O07 O3  O 0 1 N N N N N N 26.747 18.623 11.689 5.260   -1.230  -2.329 O07 5IA 63  
5IA O09 O4  O 0 1 N N N N N N 29.185 19.780 11.390 6.995   -3.011  -3.184 O09 5IA 64  
5IA O10 O5  O 0 1 N N N N N N 28.004 18.554 9.366  7.825   -0.655  -2.363 O10 5IA 65  
5IA O14 O6  O 0 1 N N N N N N 28.499 18.306 5.477  11.564  1.719   -3.108 O14 5IA 66  
5IA O16 O7  O 0 1 N N N N N N 29.718 20.716 4.888  13.089  1.557   -1.071 O16 5IA 67  
5IA O28 O8  O 0 1 N N N N N N 26.518 20.369 6.548  10.213  -0.477  -0.678 O28 5IA 68  
5IA O29 O9  O 0 1 N N N N N N 28.963 17.218 11.332 6.508   -0.913  -4.500 O29 5IA 69  
5IA O30 O10 O 0 1 N N N N N N 25.787 16.299 10.828 3.559   -2.786  -3.356 O30 5IA 70  
5IA O31 O11 O 0 1 N N N N N N 24.373 17.794 12.404 3.210   -0.309  -3.693 O31 5IA 71  
5IA O32 O12 O 0 1 N N N N N N 27.389 15.643 15.856 0.982   -0.237  0.554  O32 5IA 72  
5IA O36 O13 O 0 1 N N N N N N 25.339 16.344 18.503 -1.737  -1.686  2.302  O36 5IA 73  
5IA O59 O14 O 0 1 N N N N N N 22.979 5.597  22.209 -5.438  6.598   3.238  O59 5IA 74  
5IA O67 O15 O 0 1 N N N N N N 23.640 5.698  20.057 -4.253  6.722   1.366  O67 5IA 75  
5IA O79 O16 O 0 1 N N N N N N 26.338 7.939  20.900 -6.878  5.932   -0.516 O79 5IA 76  
5IA P06 P1  P 0 1 N N N N N N 25.693 17.301 11.939 3.711   -1.470  -2.697 P06 5IA 77  
5IA P08 P2  P 0 1 N N N N N N 28.364 18.564 11.117 6.644   -1.441  -3.124 P08 5IA 78  
5IA S34 S1  S 0 1 N N N N N N 28.248 15.478 18.354 0.767   -0.858  3.156  S34 5IA 79  
5IA H1  H1  H 0 1 N N N N N N 25.693 17.727 15.491 -1.065  -1.797  -0.818 H1  5IA 80  
5IA H2  H2  H 0 1 N N N N N N 25.527 14.705 16.086 1.469   -2.259  0.768  H2  5IA 81  
5IA H3  H3  H 0 1 N N N N N N 24.621 15.672 13.863 1.259   -2.737  -1.697 H3  5IA 82  
5IA H4  H4  H 0 1 N N N N N N 25.944 14.472 13.669 0.904   -1.014  -1.969 H4  5IA 83  
5IA H5  H5  H 0 1 N N N N N N 27.602 20.509 9.028  9.135   -0.068  -3.849 H5  5IA 84  
5IA H6  H6  H 0 1 N N N N N N 26.184 19.434 9.272  9.574   -1.562  -2.987 H6  5IA 85  
5IA H7  H7  H 0 1 N N N N N N 26.547 18.334 7.045  9.560   1.218   -1.712 H7  5IA 86  
5IA H8  H8  H 0 1 N N N N N N 29.274 18.898 7.300  11.671  -0.355  -3.201 H8  5IA 87  
5IA H9  H9  H 0 1 N N N N N N 29.225 21.274 6.842  13.050  -0.502  -1.355 H9  5IA 88  
5IA H10 H10 H 0 1 N N N N N N 27.240 20.664 4.631  11.144  1.049   0.407  H10 5IA 89  
5IA H11 H11 H 0 1 N N N N N N 25.040 23.373 1.832  14.600  1.561   3.742  H11 5IA 90  
5IA H12 H12 H 0 1 N N N N N N 28.130 23.206 7.612  11.151  -2.731  0.267  H12 5IA 91  
5IA H13 H13 H 0 1 N N N N N N 28.238 17.279 16.798 -0.239  0.892   1.823  H13 5IA 92  
5IA H14 H14 H 0 1 N N N N N N 26.287 18.085 17.743 -1.926  -0.326  0.739  H14 5IA 93  
5IA H15 H15 H 0 1 N N N N N N 26.720 17.002 21.602 -2.670  -3.984  1.060  H15 5IA 94  
5IA H16 H16 H 0 1 N N N N N N 26.946 18.029 20.145 -2.810  -4.190  2.823  H16 5IA 95  
5IA H17 H17 H 0 1 N N N N N N 24.140 18.120 20.693 -5.217  -3.610  2.700  H17 5IA 96  
5IA H18 H18 H 0 1 N N N N N N 24.937 18.242 22.298 -5.078  -3.404  0.938  H18 5IA 97  
5IA H19 H19 H 0 1 N N N N N N 26.093 19.971 20.126 -4.380  -5.773  0.716  H19 5IA 98  
5IA H20 H20 H 0 1 N N N N N N 24.425 20.388 20.646 -4.520  -5.979  2.478  H20 5IA 99  
5IA H21 H21 H 0 1 N N N N N N 25.112 21.062 22.791 -6.927  -5.399  2.356  H21 5IA 100 
5IA H22 H22 H 0 1 N N N N N N 26.621 20.090 22.732 -6.788  -5.193  0.593  H22 5IA 101 
5IA H23 H23 H 0 1 N N N N N N 27.844 21.783 21.731 -6.090  -7.562  0.371  H23 5IA 102 
5IA H24 H24 H 0 1 N N N N N N 26.461 22.339 20.729 -6.230  -7.768  2.134  H24 5IA 103 
5IA H25 H25 H 0 1 N N N N N N 25.607 23.309 23.110 -8.637  -7.188  2.011  H25 5IA 104 
5IA H26 H26 H 0 1 N N N N N N 27.365 23.263 23.478 -8.498  -6.981  0.249  H26 5IA 105 
5IA H27 H27 H 0 1 N N N N N N 27.555 24.567 21.144 -7.800  -9.351  0.027  H27 5IA 106 
5IA H28 H28 H 0 1 N N N N N N 27.189 25.433 22.675 -7.940  -9.557  1.789  H28 5IA 107 
5IA H29 H29 H 0 1 N N N N N N 25.331 26.335 21.719 -10.347 -8.976  1.667  H29 5IA 108 
5IA H30 H30 H 0 1 N N N N N N 24.646 24.690 21.499 -10.208 -8.770  -0.096 H30 5IA 109 
5IA H31 H31 H 0 1 N N N N N N 26.300 24.850 19.288 -9.510  -11.139 -0.318 H31 5IA 110 
5IA H32 H32 H 0 1 N N N N N N 25.845 26.577 19.485 -9.650  -11.345 1.445  H32 5IA 111 
5IA H33 H33 H 0 1 N N N N N N 23.716 24.371 19.333 -12.057 -10.765 1.322  H33 5IA 112 
5IA H34 H34 H 0 1 N N N N N N 24.437 25.077 17.847 -11.918 -10.559 -0.440 H34 5IA 113 
5IA H35 H35 H 0 1 N N N N N N 23.606 27.360 18.669 -11.220 -12.928 -0.662 H35 5IA 114 
5IA H36 H36 H 0 1 N N N N N N 22.357 26.187 18.130 -11.360 -13.134 1.100  H36 5IA 115 
5IA H37 H37 H 0 1 N N N N N N 21.228 26.401 20.076 -13.767 -12.554 0.978  H37 5IA 116 
5IA H38 H38 H 0 1 N N N N N N 22.698 26.025 21.038 -13.628 -12.348 -0.785 H38 5IA 117 
5IA H39 H39 H 0 1 N N N N N N 21.768 28.257 21.655 -14.522 -14.590 -0.219 H39 5IA 118 
5IA H40 H40 H 0 1 N N N N N N 23.395 28.424 20.911 -12.931 -14.717 -1.007 H40 5IA 119 
5IA H41 H41 H 0 1 N N N N N N 21.925 28.800 19.950 -13.070 -14.923 0.756  H41 5IA 120 
5IA H42 H42 H 0 1 N N N N N N 25.951 13.765 18.521 -2.750  0.297   1.938  H42 5IA 121 
5IA H43 H43 H 0 1 N N N N N N 24.311 13.836 19.250 -3.999  0.448   3.197  H43 5IA 122 
5IA H44 H44 H 0 1 N N N N N N 26.745 12.244 20.289 -4.505  0.379   0.188  H44 5IA 123 
5IA H45 H45 H 0 1 N N N N N N 25.218 12.442 21.213 -5.753  0.530   1.448  H45 5IA 124 
5IA H46 H46 H 0 1 N N N N N N 24.372 11.436 18.670 -4.710  2.639   2.229  H46 5IA 125 
5IA H47 H47 H 0 1 N N N N N N 25.873 10.517 19.030 -3.461  2.488   0.970  H47 5IA 126 
5IA H48 H48 H 0 1 N N N N N N 24.684 10.167 21.441 -5.216  2.569   -0.780 H48 5IA 127 
5IA H49 H49 H 0 1 N N N N N N 23.188 10.500 20.504 -6.465  2.720   0.479  H49 5IA 128 
5IA H50 H50 H 0 1 N N N N N N 23.698 8.523  18.989 -4.154  4.674   0.089  H50 5IA 129 
5IA H51 H51 H 0 1 N N N N N N 21.885 3.931  21.546 -5.047  8.628   2.962  H51 5IA 130 
5IA H52 H52 H 0 1 N N N N N N 23.649 3.660  21.750 -3.737  7.700   3.730  H52 5IA 131 
5IA H53 H53 H 0 1 N N N N N N 21.358 1.835  22.941 -3.831  7.138   6.090  H53 5IA 132 
5IA H54 H54 H 0 1 N N N N N N 20.925 0.883  25.208 -4.698  7.752   8.311  H54 5IA 133 
5IA H55 H55 H 0 1 N N N N N N 21.822 2.008  27.249 -6.701  9.172   8.502  H55 5IA 134 
5IA H56 H56 H 0 1 N N N N N N 23.147 4.128  27.022 -7.837  9.977   6.471  H56 5IA 135 
5IA H57 H57 H 0 1 N N N N N N 23.573 5.065  24.754 -6.965  9.370   4.250  H57 5IA 136 
5IA H58 H58 H 0 1 N N N N N N 27.986 6.948  17.571 -6.489  6.503   -3.126 H58 5IA 137 
5IA H59 H59 H 0 1 N N N N N N 28.190 7.164  19.342 -7.701  5.207   -2.983 H59 5IA 138 
5IA H60 H60 H 0 1 N N N N N N 26.719 4.905  19.518 -5.175  5.100   -4.692 H60 5IA 139 
5IA H61 H61 H 0 1 N N N N N N 27.198 4.668  17.803 -6.387  3.804   -4.549 H61 5IA 140 
5IA H62 H62 H 0 1 N N N N N N 30.750 3.867  18.264 -9.056  5.703   -6.117 H62 5IA 141 
5IA H63 H63 H 0 1 N N N N N N 30.241 5.553  17.911 -8.755  5.615   -4.365 H63 5IA 142 
5IA H64 H64 H 0 1 N N N N N N 29.947 4.084  15.890 -8.381  3.329   -6.352 H64 5IA 143 
5IA H65 H65 H 0 1 N N N N N N 28.869 2.999  16.832 -8.080  3.240   -4.600 H65 5IA 144 
5IA H66 H66 H 0 1 N N N N N N 28.360 4.686  16.479 -9.733  3.497   -5.207 H66 5IA 145 
5IA H67 H67 H 0 1 N N N N N N 30.510 5.068  20.569 -7.122  7.361   -4.558 H67 5IA 146 
5IA H68 H68 H 0 1 N N N N N N 29.362 6.391  20.167 -7.423  7.449   -6.310 H68 5IA 147 
5IA H69 H69 H 0 1 N N N N N N 29.165 5.728  22.562 -4.745  6.805   -4.994 H69 5IA 148 
5IA H70 H70 H 0 1 N N N N N N 27.649 5.361  21.670 -5.046  6.893   -6.747 H70 5IA 149 
5IA H71 H71 H 0 1 N N N N N N 28.797 4.039  22.072 -5.186  8.358   -5.745 H71 5IA 150 
5IA H72 H72 H 0 1 N N N N N N 28.104 2.894  20.616 -6.793  3.922   -6.910 H72 5IA 151 
5IA H73 H73 H 0 1 N N N N N N 28.062 2.422  18.884 -5.581  5.218   -7.053 H73 5IA 152 
5IA H74 H74 H 0 1 N N N N N N 29.820 1.100  20.133 -8.530  5.449   -7.804 H74 5IA 153 
5IA H75 H75 H 0 1 N N N N N N 30.583 2.155  18.895 -7.318  6.745   -7.947 H75 5IA 154 
5IA H76 H76 H 0 1 N N N N N N 30.625 2.627  20.628 -7.178  5.280   -8.949 H76 5IA 155 
5IA H77 H77 H 0 1 N N N N N N 25.351 27.410 3.697  13.954  -3.666  4.090  H77 5IA 156 
5IA H78 H78 H 0 1 N N N N N N 25.315 27.109 5.302  14.923  -2.771  5.131  H78 5IA 157 
5IA H79 H79 H 0 1 N N N N N N 22.802 8.312  21.666 -6.261  4.495   2.103  H79 5IA 158 
5IA H80 H80 H 0 1 N N N N N N 25.615 7.383  17.818 -5.169  4.131   -2.348 H80 5IA 159 
5IA H81 H81 H 0 1 N N N N N N 23.825 17.789 16.784 -0.441  -3.966  -0.035 H81 5IA 160 
5IA H82 H82 H 0 1 N N N N N N 30.049 19.519 11.688 7.100   -3.424  -2.316 H82 5IA 161 
5IA H83 H83 H 0 1 N N N N N N 28.299 17.432 5.790  12.437  1.890   -3.487 H83 5IA 162 
5IA H84 H84 H 0 1 N N N N N N 30.601 20.483 5.149  13.670  1.782   -1.810 H84 5IA 163 
5IA H85 H85 H 0 1 N N N N N N 23.684 17.380 11.898 3.281   0.582   -3.326 H85 5IA 164 
5IA H86 H86 H 0 1 N N N N N N 28.323 16.367 19.300 1.801   -0.038  3.414  H86 5IA 165 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5IA C21 N22 DOUB Y N 1   
5IA C21 N20 SING Y N 2   
5IA N22 C23 SING Y N 3   
5IA N20 C19 DOUB Y N 4   
5IA C23 N24 SING N N 5   
5IA C23 C25 DOUB Y N 6   
5IA C19 C25 SING Y N 7   
5IA C19 N18 SING Y N 8   
5IA O16 C15 SING N N 9   
5IA C25 N26 SING Y N 10  
5IA O14 C13 SING N N 11  
5IA C17 N18 SING N N 12  
5IA C17 C15 SING N N 13  
5IA C17 O28 SING N N 14  
5IA N18 C27 SING Y N 15  
5IA C15 C13 SING N N 16  
5IA N26 C27 DOUB Y N 17  
5IA C13 C12 SING N N 18  
5IA O28 C12 SING N N 19  
5IA C12 C11 SING N N 20  
5IA C11 O10 SING N N 21  
5IA O10 P08 SING N N 22  
5IA O30 P06 DOUB N N 23  
5IA P08 O29 DOUB N N 24  
5IA P08 O09 SING N N 25  
5IA P08 O07 SING N N 26  
5IA O07 P06 SING N N 27  
5IA P06 O31 SING N N 28  
5IA P06 O05 SING N N 29  
5IA O05 C04 SING N N 30  
5IA C04 C03 SING N N 31  
5IA C03 O32 SING N N 32  
5IA C03 C02 SING N N 33  
5IA O32 C33 SING N N 34  
5IA C02 O01 SING N N 35  
5IA C02 C35 SING N N 36  
5IA C74 C73 SING N N 37  
5IA C33 C35 SING N N 38  
5IA C33 S34 SING N N 39  
5IA C35 O36 SING N N 40  
5IA C73 N72 SING N N 41  
5IA O36 C37 SING N N 42  
5IA C70 N69 SING N N 43  
5IA C70 C71 SING N N 44  
5IA N69 C68 SING N N 45  
5IA C71 N72 SING N N 46  
5IA C47 C48 SING N N 47  
5IA C47 C46 SING N N 48  
5IA C48 C49 SING N N 49  
5IA N72 C77 SING N N 50  
5IA N72 C75 SING N N 51  
5IA C52 C53 SING N N 52  
5IA C52 N51 SING N N 53  
5IA C54 C53 SING N N 54  
5IA C54 C55 SING N N 55  
5IA C77 C78 SING N N 56  
5IA C46 C45 SING N N 57  
5IA C37 N51 DOUB N N 58  
5IA C37 C38 SING N N 59  
5IA C68 C56 SING N N 60  
5IA C68 O79 DOUB N N 61  
5IA C56 C55 SING N N 62  
5IA C56 N57 SING N N 63  
5IA O67 C58 DOUB N N 64  
5IA C49 C50 SING N N 65  
5IA C75 C76 SING N N 66  
5IA C38 C39 SING N N 67  
5IA C40 C39 SING N N 68  
5IA C40 C41 SING N N 69  
5IA N57 C58 SING N N 70  
5IA C58 O59 SING N N 71  
5IA C45 C44 SING N N 72  
5IA C42 C41 SING N N 73  
5IA C42 C43 SING N N 74  
5IA C44 C43 SING N N 75  
5IA C60 O59 SING N N 76  
5IA C60 C61 SING N N 77  
5IA C61 C62 DOUB Y N 78  
5IA C61 C66 SING Y N 79  
5IA C62 C63 SING Y N 80  
5IA C66 C65 DOUB Y N 81  
5IA C63 C64 DOUB Y N 82  
5IA C65 C64 SING Y N 83  
5IA C02 H1  SING N N 84  
5IA C03 H2  SING N N 85  
5IA C04 H3  SING N N 86  
5IA C04 H4  SING N N 87  
5IA C11 H5  SING N N 88  
5IA C11 H6  SING N N 89  
5IA C12 H7  SING N N 90  
5IA C13 H8  SING N N 91  
5IA C15 H9  SING N N 92  
5IA C17 H10 SING N N 93  
5IA C21 H11 SING N N 94  
5IA C27 H12 SING N N 95  
5IA C33 H13 SING N N 96  
5IA C35 H14 SING N N 97  
5IA C38 H15 SING N N 98  
5IA C38 H16 SING N N 99  
5IA C39 H17 SING N N 100 
5IA C39 H18 SING N N 101 
5IA C40 H19 SING N N 102 
5IA C40 H20 SING N N 103 
5IA C41 H21 SING N N 104 
5IA C41 H22 SING N N 105 
5IA C42 H23 SING N N 106 
5IA C42 H24 SING N N 107 
5IA C43 H25 SING N N 108 
5IA C43 H26 SING N N 109 
5IA C44 H27 SING N N 110 
5IA C44 H28 SING N N 111 
5IA C45 H29 SING N N 112 
5IA C45 H30 SING N N 113 
5IA C46 H31 SING N N 114 
5IA C46 H32 SING N N 115 
5IA C47 H33 SING N N 116 
5IA C47 H34 SING N N 117 
5IA C48 H35 SING N N 118 
5IA C48 H36 SING N N 119 
5IA C49 H37 SING N N 120 
5IA C49 H38 SING N N 121 
5IA C50 H39 SING N N 122 
5IA C50 H40 SING N N 123 
5IA C50 H41 SING N N 124 
5IA C52 H42 SING N N 125 
5IA C52 H43 SING N N 126 
5IA C53 H44 SING N N 127 
5IA C53 H45 SING N N 128 
5IA C54 H46 SING N N 129 
5IA C54 H47 SING N N 130 
5IA C55 H48 SING N N 131 
5IA C55 H49 SING N N 132 
5IA C56 H50 SING N N 133 
5IA C60 H51 SING N N 134 
5IA C60 H52 SING N N 135 
5IA C62 H53 SING N N 136 
5IA C63 H54 SING N N 137 
5IA C64 H55 SING N N 138 
5IA C65 H56 SING N N 139 
5IA C66 H57 SING N N 140 
5IA C70 H58 SING N N 141 
5IA C70 H59 SING N N 142 
5IA C71 H60 SING N N 143 
5IA C71 H61 SING N N 144 
5IA C73 H62 SING N N 145 
5IA C73 H63 SING N N 146 
5IA C74 H64 SING N N 147 
5IA C74 H65 SING N N 148 
5IA C74 H66 SING N N 149 
5IA C75 H67 SING N N 150 
5IA C75 H68 SING N N 151 
5IA C76 H69 SING N N 152 
5IA C76 H70 SING N N 153 
5IA C76 H71 SING N N 154 
5IA C77 H72 SING N N 155 
5IA C77 H73 SING N N 156 
5IA C78 H74 SING N N 157 
5IA C78 H75 SING N N 158 
5IA C78 H76 SING N N 159 
5IA N24 H77 SING N N 160 
5IA N24 H78 SING N N 161 
5IA N57 H79 SING N N 162 
5IA N69 H80 SING N N 163 
5IA O01 H81 SING N N 164 
5IA O09 H82 SING N N 165 
5IA O14 H83 SING N N 166 
5IA O16 H84 SING N N 167 
5IA O31 H85 SING N N 168 
5IA S34 H86 SING N N 169 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5IA SMILES           ACDLabs              12.01 "Nc1ncnc2c1ncn2C1OC(COP(=O)(O)OP(=O)(O)OCC2OC(S)C(O/C(=N\CCCCC(NC(=O)OCc3ccccc3)C(=O)NCC[N+](CC)(CC)CC)CCCCCCCCCCCCC)C2O)C(O)C1O"                                                                                                                                                                                                                                                                                                                   
5IA InChI            InChI                1.03  "InChI=1S/C51H85N9O16P2S/c1-5-9-10-11-12-13-14-15-16-17-21-27-40(53-28-23-22-26-37(48(64)54-29-30-60(6-2,7-3)8-4)58-51(65)70-31-36-24-19-18-20-25-36)75-45-43(62)39(74-50(45)79)33-72-78(68,69)76-77(66,67)71-32-38-42(61)44(63)49(73-38)59-35-57-41-46(52)55-34-56-47(41)59/h18-20,24-25,34-35,37-39,42-45,49-50,61-63H,5-17,21-23,26-33H2,1-4H3,(H6-,52,54,55,56,58,64,65,66,67,68,69,79)/p+1/b53-40-/t37-,38+,39+,42+,43+,44+,45+,49+,50+/m0/s1" 
5IA InChIKey         InChI                1.03  NDEIYVWRFNKRPD-LQYQRRKDSA-O                                                                                                                                                                                                                                                                                                                                                                                                                         
5IA SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCCCCCC(O[C@H]1[C@@H](S)O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34)[C@H]1O)=NCCCC[C@H](NC(=O)OCc5ccccc5)C(=O)NCC[N+](CC)(CC)CC"                                                                                                                                                                                                                                                                         
5IA SMILES           CACTVS               3.385 "CCCCCCCCCCCCCC(O[CH]1[CH](S)O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34)[CH]1O)=NCCCC[CH](NC(=O)OCc5ccccc5)C(=O)NCC[N+](CC)(CC)CC"                                                                                                                                                                                                                                                                                    
5IA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCC/C(=N/CCCC[C@@H](C(=O)NCC[N+](CC)(CC)CC)NC(=O)OCc1ccccc1)/O[C@@H]2[C@@H]([C@H](O[C@@H]2S)COP(=O)(O)OP(=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O"                                                                                                                                                                                                                                                                      
5IA SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCCC(=NCCCCC(C(=O)NCC[N+](CC)(CC)CC)NC(=O)OCc1ccccc1)OC2C(C(OC2S)COP(=O)(O)OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O"                                                                                                                                                                                                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5IA "SYSTEMATIC NAME" ACDLabs              12.01 "2-{[(2S)-6-[(Z)-(1-{[(2R,3R,4R,5R)-5-({[(R)-{[(R)-{[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-4-hydroxy-2-sulfanyloxolan-3-yl]oxy}tetradecylidene)amino]-2-{[(benzyloxy)carbonyl]amino}hexanoyl]amino}-N,N,N-triethylethan-1-aminium (non-preferred name)" 
5IA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[(2~{S})-6-[(~{Z})-1-[(2~{R},3~{R},4~{R},5~{R})-5-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-4-oxidanyl-2-sulfanyl-oxolan-3-yl]oxytetradecylideneamino]-2-(phenylmethoxycarbonylamino)hexanoyl]amino]ethyl-triethyl-azanium"              
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5IA "Create component" 2021-07-20 RCSB 
5IA "Initial release"  2024-08-07 RCSB 
# 
