data_R89
# 
_chem_comp.id                                    R89 
_chem_comp.name                                  "11-[(3-chlorophenyl)methyl]-7-[[4-(trifluoromethyl)phenyl]methyl]-2,5,7,11-tetrazatricyclo[7.4.0.0^{2,6}]trideca-1(9),3,5-trien-8-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H20 Cl F3 N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-05 
_chem_comp.pdbx_modified_date                    2024-08-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        472.890 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     R89 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8W7C 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
R89 C10  C1  C  0 1 N N N N N N 8.259  -21.764 30.558 -5.109 -2.530 0.895  C10  R89 1  
R89 C13  C2  C  0 1 Y N N N N N -0.424 -15.128 31.296 4.402  -2.760 -0.259 C13  R89 2  
R89 C15  C3  C  0 1 Y N N N N N 0.159  -13.681 29.200 4.606  -2.591 2.122  C15  R89 3  
R89 C17  C4  C  0 1 Y N N N N N 1.623  -13.495 31.375 4.644  -0.612 0.773  C17  R89 4  
R89 C20  C5  C  0 1 N N N N N N 2.778  -12.915 32.166 4.750  0.887  0.658  C20  R89 5  
R89 C22  C6  C  0 1 N N N N N N 4.307  -13.775 30.645 2.605  1.095  -0.440 C22  R89 6  
R89 C24  C7  C  0 1 N N N N N N 6.127  -13.840 32.349 1.044  2.882  0.331  C24  R89 7  
R89 C26  C8  C  0 1 N N N N N N 4.534  -12.054 32.210 3.482  2.945  0.827  C26  R89 8  
R89 C28  C9  C  0 1 N N N N N N 6.570  -14.830 30.062 0.230  1.280  -1.240 C28  R89 9  
R89 C02  C10 C  0 1 N N N N N N 8.820  -15.831 29.603 -2.047 1.347  -2.104 C02  R89 10 
R89 C03  C11 C  0 1 Y N N N N N 8.717  -17.324 29.840 -2.846 0.336  -1.322 C03  R89 11 
R89 C04  C12 C  0 1 Y N N N N N 7.354  -17.901 30.175 -3.942 0.742  -0.584 C04  R89 12 
R89 C05  C13 C  0 1 Y N N N N N 7.211  -19.393 30.414 -4.674 -0.186 0.133  C05  R89 13 
R89 C06  C14 C  0 1 Y N N N N N 8.432  -20.286 30.313 -4.310 -1.519 0.113  C06  R89 14 
R89 C07  C15 C  0 1 Y N N N N N 9.798  -19.712 29.975 -3.214 -1.925 -0.625 C07  R89 15 
R89 C08  C16 C  0 1 Y N N N N N 9.942  -18.218 29.739 -2.485 -0.999 -1.347 C08  R89 16 
R89 C14  C17 C  0 1 Y N N N N N -0.727 -14.718 29.869 4.455  -3.363 0.986  C14  R89 17 
R89 C16  C18 C  0 1 Y N N N N N 1.330  -13.066 29.951 4.703  -1.216 2.015  C16  R89 18 
R89 C18  C19 C  0 1 Y N N N N N 0.738  -14.520 32.050 4.499  -1.384 -0.364 C18  R89 19 
R89 C23  C20 C  0 1 N N N N N N 5.664  -14.144 31.007 1.273  1.797  -0.423 C23  R89 20 
R89 C25  C21 C  0 1 N N N N N N 5.235  -13.195 33.152 2.103  3.470  1.229  C25  R89 21 
R89 C30  C22 C  0 1 Y N N N N N 8.356  -14.837 31.873 -1.196 2.999  -0.483 C30  R89 22 
R89 C32  C23 C  0 1 Y N N N N N 9.442  -14.558 33.736 -1.968 4.739  0.554  C32  R89 23 
R89 C33  C24 C  0 1 Y N N N N N 8.162  -14.020 33.897 -0.693 4.590  0.957  C33  R89 24 
R89 F09  F1  F  0 1 N N N N N N 7.440  -21.953 31.621 -5.663 -1.915 2.022  F09  R89 25 
R89 F11  F2  F  0 1 N N N N N N 9.475  -22.307 30.785 -6.133 -3.039 0.089  F11  R89 26 
R89 F12  F3  F  0 1 N N N N N N 7.702  -22.330 29.466 -4.270 -3.575 1.298  F12  R89 27 
R89 N01  N1  N  0 1 N N N N N N 7.892  -15.169 30.486 -0.975 1.880  -1.260 N01  R89 28 
R89 N21  N2  N  0 1 N N N N N N 3.724  -12.560 31.441 3.407  1.478  0.725  N21  R89 29 
R89 N27  N3  N  0 1 Y N N N N N 7.509  -14.192 32.766 -0.194 3.488  0.302  N27  R89 30 
R89 N31  N4  N  0 1 Y N N N N N 9.536  -15.054 32.484 -2.254 3.761  -0.322 N31  R89 31 
R89 O29  O1  O  0 1 N N N N N N 6.208  -15.095 28.976 0.428  0.292  -1.924 O29  R89 32 
R89 CL19 CL1 CL 0 0 N N N N N N -1.432 -16.328 32.109 4.220  -3.730 -1.687 CL19 R89 33 
R89 H1   H1  H  0 1 N N N N N N -0.044 -13.378 28.183 4.648  -3.062 3.093  H1   R89 34 
R89 H2   H2  H  0 1 N N N N N N 2.417  -12.041 32.727 5.358  1.272  1.476  H2   R89 35 
R89 H3   H3  H  0 1 N N N N N N 3.141  -13.678 32.870 5.214  1.146  -0.294 H3   R89 36 
R89 H4   H4  H  0 1 N N N N N N 4.295  -13.521 29.575 2.443  0.017  -0.426 H4   R89 37 
R89 H5   H5  H  0 1 N N N N N N 3.657  -14.644 30.822 3.141  1.365  -1.350 H5   R89 38 
R89 H6   H6  H  0 1 N N N N N N 5.312  -11.540 31.627 3.768  3.366  -0.137 H6   R89 39 
R89 H7   H7  H  0 1 N N N N N N 4.016  -11.326 32.851 4.216  3.225  1.582  H7   R89 40 
R89 H8   H8  H  0 1 N N N N N N 9.844  -15.490 29.816 -1.615 0.867  -2.982 H8   R89 41 
R89 H9   H9  H  0 1 N N N N N N 8.567  -15.602 28.557 -2.701 2.161  -2.419 H9   R89 42 
R89 H10  H10 H  0 1 N N N N N N 6.492  -17.254 30.243 -4.226 1.783  -0.568 H10  R89 43 
R89 H11  H11 H  0 1 N N N N N N 6.247  -19.815 30.654 -5.530 0.132  0.710  H11  R89 44 
R89 H12  H12 H  0 1 N N N N N N 10.659 -20.360 29.903 -2.930 -2.967 -0.641 H12  R89 45 
R89 H13  H13 H  0 1 N N N N N N 10.907 -17.795 29.501 -1.631 -1.316 -1.926 H13  R89 46 
R89 H14  H14 H  0 1 N N N N N N -1.559 -15.156 29.337 4.379  -4.437 1.069  H14  R89 47 
R89 H15  H15 H  0 1 N N N N N N 1.952  -12.325 29.471 4.821  -0.613 2.903  H15  R89 48 
R89 H16  H16 H  0 1 N N N N N N 0.936  -14.817 33.069 4.462  -0.913 -1.336 H16  R89 49 
R89 H17  H17 H  0 1 N N N N N N 5.753  -12.726 34.001 2.090  4.556  1.140  H17  R89 50 
R89 H18  H18 H  0 1 N N N N N N 4.478  -13.899 33.528 1.897  3.191  2.262  H18  R89 51 
R89 H19  H19 H  0 1 N N N N N N 10.221 -14.574 34.484 -2.647 5.513  0.880  H19  R89 52 
R89 H20  H20 H  0 1 N N N N N N 7.777  -13.548 34.789 -0.163 5.216  1.659  H20  R89 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
R89 O29 C28  DOUB N N 1  
R89 C15 C14  DOUB Y N 2  
R89 C15 C16  SING Y N 3  
R89 F12 C10  SING N N 4  
R89 C02 C03  SING N N 5  
R89 C02 N01  SING N N 6  
R89 C08 C03  DOUB Y N 7  
R89 C08 C07  SING Y N 8  
R89 C03 C04  SING Y N 9  
R89 C14 C13  SING Y N 10 
R89 C16 C17  DOUB Y N 11 
R89 C07 C06  DOUB Y N 12 
R89 C28 N01  SING N N 13 
R89 C28 C23  SING N N 14 
R89 C04 C05  DOUB Y N 15 
R89 C06 C05  SING Y N 16 
R89 C06 C10  SING N N 17 
R89 N01 C30  SING N N 18 
R89 C10 F11  SING N N 19 
R89 C10 F09  SING N N 20 
R89 C22 C23  SING N N 21 
R89 C22 N21  SING N N 22 
R89 C23 C24  DOUB N N 23 
R89 C13 C18  DOUB Y N 24 
R89 C13 CL19 SING N N 25 
R89 C17 C18  SING Y N 26 
R89 C17 C20  SING N N 27 
R89 N21 C20  SING N N 28 
R89 N21 C26  SING N N 29 
R89 C30 N31  DOUB Y N 30 
R89 C30 N27  SING Y N 31 
R89 C26 C25  SING N N 32 
R89 C24 N27  SING N N 33 
R89 C24 C25  SING N N 34 
R89 N31 C32  SING Y N 35 
R89 N27 C33  SING Y N 36 
R89 C32 C33  DOUB Y N 37 
R89 C15 H1   SING N N 38 
R89 C20 H2   SING N N 39 
R89 C20 H3   SING N N 40 
R89 C22 H4   SING N N 41 
R89 C22 H5   SING N N 42 
R89 C26 H6   SING N N 43 
R89 C26 H7   SING N N 44 
R89 C02 H8   SING N N 45 
R89 C02 H9   SING N N 46 
R89 C04 H10  SING N N 47 
R89 C05 H11  SING N N 48 
R89 C07 H12  SING N N 49 
R89 C08 H13  SING N N 50 
R89 C14 H14  SING N N 51 
R89 C16 H15  SING N N 52 
R89 C18 H16  SING N N 53 
R89 C25 H17  SING N N 54 
R89 C25 H18  SING N N 55 
R89 C32 H19  SING N N 56 
R89 C33 H20  SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
R89 InChI            InChI                1.06  "InChI=1S/C24H20ClF3N4O/c25-19-3-1-2-17(12-19)13-30-10-8-21-20(15-30)22(33)32(23-29-9-11-31(21)23)14-16-4-6-18(7-5-16)24(26,27)28/h1-7,9,11-12H,8,10,13-15H2" 
R89 InChIKey         InChI                1.06  YLOGPPCKNRATOS-UHFFFAOYSA-N                                                                                                                                   
R89 SMILES_CANONICAL CACTVS               3.385 "FC(F)(F)c1ccc(CN2C(=O)C3=C(CCN(Cc4cccc(Cl)c4)C3)n5ccnc25)cc1"                                                                                                
R89 SMILES           CACTVS               3.385 "FC(F)(F)c1ccc(CN2C(=O)C3=C(CCN(Cc4cccc(Cl)c4)C3)n5ccnc25)cc1"                                                                                                
R89 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Cl)CN2CCC3=C(C2)C(=O)N(c4n3ccn4)Cc5ccc(cc5)C(F)(F)F"                                                                                              
R89 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)Cl)CN2CCC3=C(C2)C(=O)N(c4n3ccn4)Cc5ccc(cc5)C(F)(F)F"                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           R89 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "11-[(3-chlorophenyl)methyl]-7-[[4-(trifluoromethyl)phenyl]methyl]-2,5,7,11-tetrazatricyclo[7.4.0.0^{2,6}]trideca-1(9),3,5-trien-8-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
R89 "Create component" 2023-09-05 PDBC 
R89 "Initial release"  2024-09-04 RCSB 
# 
