data_OS9
# 
_chem_comp.id                                    OS9 
_chem_comp.name                                  "8-[[3-(2-methoxyphenoxy)phenyl]methyl]-1-(2-phenylethyl)-1,3,8-triazaspiro[4.5]decan-4-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H33 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         LMD-009 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-24 
_chem_comp.pdbx_modified_date                    2024-02-02 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        471.591 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OS9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8KFX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OS9 O1  O1  O 0 1 N N N N N N 120.610 127.008 164.186 5.483  -2.199 2.092  O1  OS9 1  
OS9 C1  C1  C 0 1 N N N N N N 120.114 126.002 165.063 6.335  -2.678 3.134  C1  OS9 2  
OS9 C5  C2  C 0 1 Y N N N N N 124.655 127.212 163.356 7.096  0.550  -0.534 C5  OS9 3  
OS9 C6  C3  C 0 1 Y N N N N N 123.762 128.153 162.860 5.787  0.133  -0.695 C6  OS9 4  
OS9 C4  C4  C 0 1 Y N N N N N 124.202 126.184 164.141 7.864  0.045  0.498  C4  OS9 5  
OS9 C3  C5  C 0 1 Y N N N N N 122.850 126.082 164.442 7.326  -0.876 1.378  C3  OS9 6  
OS9 O3  O2  O 0 1 N N N N N N 126.074 129.288 167.962 -1.505 3.772  1.464  O3  OS9 7  
OS9 C2  C6  C 0 1 Y N N N N N 121.953 127.016 163.948 6.014  -1.294 1.227  C2  OS9 8  
OS9 O2  O3  O 0 1 N N N N N N 121.506 128.980 162.669 3.956  -1.204 0.025  O2  OS9 9  
OS9 C10 C7  C 0 1 Y N N N N N 121.160 132.578 163.220 2.526  -0.787 -3.294 C10 OS9 10 
OS9 C11 C8  C 0 1 Y N N N N N 121.637 132.684 164.513 1.787  0.369  -3.112 C11 OS9 11 
OS9 C12 C9  C 0 1 Y N N N N N 122.086 131.565 165.194 1.775  0.997  -1.881 C12 OS9 12 
OS9 C13 C10 C 0 1 Y N N N N N 122.014 130.334 164.558 2.501  0.473  -0.828 C13 OS9 13 
OS9 C14 C11 C 0 1 N N N N N N 122.600 131.673 166.610 0.970  2.256  -1.686 C14 OS9 14 
OS9 C15 C12 C 0 1 N N N N N N 124.420 132.003 168.122 -0.366 1.287  0.085  C15 OS9 15 
OS9 C16 C13 C 0 1 N N N N N N 125.854 132.457 168.287 -1.772 0.796  0.441  C16 OS9 16 
OS9 C17 C14 C 0 1 N N N N N N 126.791 131.589 167.442 -2.742 1.973  0.405  C17 OS9 17 
OS9 C18 C15 C 0 1 N N N N N N 126.303 131.546 165.992 -2.704 2.649  -0.963 C18 OS9 18 
OS9 C19 C16 C 0 1 N N N N N N 124.845 131.142 165.932 -1.268 3.081  -1.274 C19 OS9 19 
OS9 C20 C17 C 0 1 N N N N N N 126.903 130.185 168.037 -2.409 2.965  1.492  C20 OS9 20 
OS9 C21 C18 C 0 1 N N N N N N 128.849 131.353 168.621 -4.222 1.715  2.169  C21 OS9 21 
OS9 C22 C19 C 0 1 N N N N N N 128.522 133.416 167.216 -4.280 0.094  0.357  C22 OS9 22 
OS9 C23 C20 C 0 1 N N N N N N 128.702 134.304 168.446 -5.760 -0.283 0.444  C23 OS9 23 
OS9 C24 C21 C 0 1 Y N N N N N 128.509 135.760 168.117 -5.930 -1.737 0.087  C24 OS9 24 
OS9 C25 C22 C 0 1 Y N N N N N 127.384 136.189 167.434 -6.147 -2.105 -1.228 C25 OS9 25 
OS9 C26 C23 C 0 1 Y N N N N N 127.202 137.531 167.143 -6.304 -3.438 -1.555 C26 OS9 26 
OS9 C27 C24 C 0 1 Y N N N N N 128.150 138.453 167.511 -6.244 -4.404 -0.568 C27 OS9 27 
OS9 C28 C25 C 0 1 Y N N N N N 129.278 138.041 168.171 -6.026 -4.036 0.747  C28 OS9 28 
OS9 C29 C26 C 0 1 Y N N N N N 129.453 136.704 168.483 -5.865 -2.703 1.073  C29 OS9 29 
OS9 C7  C27 C 0 1 Y N N N N N 122.424 128.054 163.147 5.243  -0.793 0.181  C7  OS9 30 
OS9 C8  C28 C 0 1 Y N N N N N 121.555 130.237 163.261 3.242  -0.686 -1.008 C8  OS9 31 
OS9 C9  C29 C 0 1 Y N N N N N 121.105 131.351 162.587 3.248  -1.319 -2.244 C9  OS9 32 
OS9 N1  N1  N 0 1 N N N N N N 124.010 132.062 166.714 -0.387 1.907  -1.247 N1  OS9 33 
OS9 N2  N2  N 0 1 N N N N N N 128.057 130.106 168.697 -3.290 2.800  2.501  N2  OS9 34 
OS9 N3  N3  N 0 1 N N N N N N 128.190 132.022 167.487 -4.113 1.511  0.705  N3  OS9 35 
OS9 H1  H1  H 0 1 N N N N N N 119.024 126.110 165.166 5.789  -3.392 3.751  H1  OS9 36 
OS9 H2  H2  H 0 1 N N N N N N 120.347 125.009 164.651 7.206  -3.166 2.696  H2  OS9 37 
OS9 H3  H3  H 0 1 N N N N N N 120.588 126.110 166.050 6.661  -1.840 3.750  H3  OS9 38 
OS9 H4  H4  H 0 1 N N N N N N 125.707 127.290 163.123 7.520  1.268  -1.220 H4  OS9 39 
OS9 H5  H5  H 0 1 N N N N N N 124.122 128.965 162.246 5.189  0.529  -1.502 H5  OS9 40 
OS9 H6  H6  H 0 1 N N N N N N 124.897 125.452 164.526 8.887  0.370  0.617  H6  OS9 41 
OS9 H7  H7  H 0 1 N N N N N N 122.496 125.272 165.063 7.928  -1.269 2.184  H7  OS9 42 
OS9 H8  H8  H 0 1 N N N N N N 120.827 133.463 162.699 2.533  -1.276 -4.256 H8  OS9 43 
OS9 H9  H9  H 0 1 N N N N N N 121.660 133.649 164.997 1.220  0.780  -3.933 H9  OS9 44 
OS9 H10 H10 H 0 1 N N N N N N 122.321 129.442 165.084 2.491  0.965  0.133  H10 OS9 45 
OS9 H11 H11 H 0 1 N N N N N N 121.996 132.425 167.139 1.448  2.880  -0.930 H11 OS9 46 
OS9 H12 H12 H 0 1 N N N N N N 122.476 130.694 167.097 0.918  2.803  -2.628 H12 OS9 47 
OS9 H13 H13 H 0 1 N N N N N N 123.765 132.657 168.716 -0.040 2.021  0.822  H13 OS9 48 
OS9 H14 H14 H 0 1 N N N N N N 124.327 130.967 168.481 0.324  0.444  0.082  H14 OS9 49 
OS9 H15 H15 H 0 1 N N N N N N 126.140 132.374 169.346 -2.087 0.042  -0.280 H15 OS9 50 
OS9 H16 H16 H 0 1 N N N N N N 125.942 133.505 167.964 -1.763 0.362  1.441  H16 OS9 51 
OS9 H17 H17 H 0 1 N N N N N N 126.904 130.816 165.430 -3.047 1.949  -1.725 H17 OS9 52 
OS9 H18 H18 H 0 1 N N N N N N 126.421 132.542 165.541 -3.354 3.524  -0.955 H18 OS9 53 
OS9 H19 H19 H 0 1 N N N N N N 124.511 131.156 164.884 -1.233 3.539  -2.263 H19 OS9 54 
OS9 H20 H20 H 0 1 N N N N N N 124.737 130.125 166.338 -0.936 3.803  -0.528 H20 OS9 55 
OS9 H21 H21 H 0 1 N N N N N N 129.909 131.148 168.411 -3.940 0.803  2.696  H21 OS9 56 
OS9 H22 H22 H 0 1 N N N N N N 128.766 131.944 169.545 -5.240 2.000  2.434  H22 OS9 57 
OS9 H23 H23 H 0 1 N N N N N N 129.462 133.435 166.645 -3.707 -0.521 1.052  H23 OS9 58 
OS9 H24 H24 H 0 1 N N N N N N 127.713 133.844 166.605 -3.921 -0.075 -0.658 H24 OS9 59 
OS9 H25 H25 H 0 1 N N N N N N 127.965 134.010 169.208 -6.119 -0.113 1.460  H25 OS9 60 
OS9 H26 H26 H 0 1 N N N N N N 129.718 134.160 168.843 -6.333 0.332  -0.250 H26 OS9 61 
OS9 H27 H27 H 0 1 N N N N N N 126.640 135.470 167.125 -6.194 -1.350 -1.999 H27 OS9 62 
OS9 H28 H28 H 0 1 N N N N N N 126.311 137.853 166.625 -6.473 -3.726 -2.582 H28 OS9 63 
OS9 H29 H29 H 0 1 N N N N N N 128.007 139.499 167.281 -6.367 -5.446 -0.824 H29 OS9 64 
OS9 H30 H30 H 0 1 N N N N N N 130.033 138.762 168.449 -5.980 -4.791 1.518  H30 OS9 65 
OS9 H31 H31 H 0 1 N N N N N N 130.338 136.393 169.019 -5.691 -2.416 2.100  H31 OS9 66 
OS9 H32 H32 H 0 1 N N N N N N 120.717 131.267 161.583 3.824  -2.221 -2.386 H32 OS9 67 
OS9 H34 H34 H 0 1 N N N N N N 128.356 129.290 169.192 -3.305 3.318  3.321  H34 OS9 68 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OS9 C9  C10 DOUB Y N 1  
OS9 C9  C8  SING Y N 2  
OS9 O2  C7  SING N N 3  
OS9 O2  C8  SING N N 4  
OS9 C6  C7  DOUB Y N 5  
OS9 C6  C5  SING Y N 6  
OS9 C7  C2  SING Y N 7  
OS9 C10 C11 SING Y N 8  
OS9 C8  C13 DOUB Y N 9  
OS9 C5  C4  DOUB Y N 10 
OS9 C2  O1  SING N N 11 
OS9 C2  C3  DOUB Y N 12 
OS9 C4  C3  SING Y N 13 
OS9 O1  C1  SING N N 14 
OS9 C11 C12 DOUB Y N 15 
OS9 C13 C12 SING Y N 16 
OS9 C12 C14 SING N N 17 
OS9 C19 C18 SING N N 18 
OS9 C19 N1  SING N N 19 
OS9 C18 C17 SING N N 20 
OS9 C14 N1  SING N N 21 
OS9 N1  C15 SING N N 22 
OS9 C26 C25 DOUB Y N 23 
OS9 C26 C27 SING Y N 24 
OS9 C22 N3  SING N N 25 
OS9 C22 C23 SING N N 26 
OS9 C25 C24 SING Y N 27 
OS9 C17 N3  SING N N 28 
OS9 C17 C20 SING N N 29 
OS9 C17 C16 SING N N 30 
OS9 N3  C21 SING N N 31 
OS9 C27 C28 DOUB Y N 32 
OS9 O3  C20 DOUB N N 33 
OS9 C20 N2  SING N N 34 
OS9 C24 C23 SING N N 35 
OS9 C24 C29 DOUB Y N 36 
OS9 C15 C16 SING N N 37 
OS9 C28 C29 SING Y N 38 
OS9 C21 N2  SING N N 39 
OS9 C1  H1  SING N N 40 
OS9 C1  H2  SING N N 41 
OS9 C1  H3  SING N N 42 
OS9 C5  H4  SING N N 43 
OS9 C6  H5  SING N N 44 
OS9 C4  H6  SING N N 45 
OS9 C3  H7  SING N N 46 
OS9 C10 H8  SING N N 47 
OS9 C11 H9  SING N N 48 
OS9 C13 H10 SING N N 49 
OS9 C14 H11 SING N N 50 
OS9 C14 H12 SING N N 51 
OS9 C15 H13 SING N N 52 
OS9 C15 H14 SING N N 53 
OS9 C16 H15 SING N N 54 
OS9 C16 H16 SING N N 55 
OS9 C18 H17 SING N N 56 
OS9 C18 H18 SING N N 57 
OS9 C19 H19 SING N N 58 
OS9 C19 H20 SING N N 59 
OS9 C21 H21 SING N N 60 
OS9 C21 H22 SING N N 61 
OS9 C22 H23 SING N N 62 
OS9 C22 H24 SING N N 63 
OS9 C23 H25 SING N N 64 
OS9 C23 H26 SING N N 65 
OS9 C25 H27 SING N N 66 
OS9 C26 H28 SING N N 67 
OS9 C27 H29 SING N N 68 
OS9 C28 H30 SING N N 69 
OS9 C29 H31 SING N N 70 
OS9 C9  H32 SING N N 71 
OS9 N2  H34 SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OS9 InChI            InChI                1.06  "InChI=1S/C29H33N3O3/c1-34-26-12-5-6-13-27(26)35-25-11-7-10-24(20-25)21-31-18-15-29(16-19-31)28(33)30-22-32(29)17-14-23-8-3-2-4-9-23/h2-13,20H,14-19,21-22H2,1H3,(H,30,33)" 
OS9 InChIKey         InChI                1.06  MRXASGVUQJVWMP-UHFFFAOYSA-N                                                                                                                                                 
OS9 SMILES_CANONICAL CACTVS               3.385 "COc1ccccc1Oc2cccc(CN3CCC4(CC3)N(CCc5ccccc5)CNC4=O)c2"                                                                                                                      
OS9 SMILES           CACTVS               3.385 "COc1ccccc1Oc2cccc(CN3CCC4(CC3)N(CCc5ccccc5)CNC4=O)c2"                                                                                                                      
OS9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccccc1Oc2cccc(c2)CN3CCC4(CC3)C(=O)NCN4CCc5ccccc5"                                                                                                                      
OS9 SMILES           "OpenEye OEToolkits" 2.0.7 "COc1ccccc1Oc2cccc(c2)CN3CCC4(CC3)C(=O)NCN4CCc5ccccc5"                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           OS9 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "8-[[3-(2-methoxyphenoxy)phenyl]methyl]-1-(2-phenylethyl)-1,3,8-triazaspiro[4.5]decan-4-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OS9 "Create component" 2023-08-24 PDBC 
OS9 "Initial release"  2024-02-07 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      OS9 
_pdbx_chem_comp_synonyms.name         LMD-009 
_pdbx_chem_comp_synonyms.provenance   PUBCHEM 
_pdbx_chem_comp_synonyms.type         ? 
# 
