data_M89
#

_chem_comp.id                                   M89
_chem_comp.name                                 "(3R)-3-(5,6-dioxo-1,4,5,6-tetrahydropyrazin-2-yl)-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H9 N3 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2022-03-14
_chem_comp.pdbx_modified_date                   2022-06-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       287.294
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    M89
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7U9U
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M89  N1   N1   N  0  1  N  N  N  -14.632  12.958   0.544   3.812   1.395  -0.474  N1   M89   1  
M89  N3   N2   N  0  1  N  N  N  -12.676  14.617   7.490  -7.062  -0.812  -0.283  N3   M89   2  
M89  C4   C1   C  0  1  N  N  N  -14.491  14.050  -0.237   4.732   0.424  -0.288  C4   M89   3  
M89  C5   C2   C  0  1  N  N  R  -11.131  11.526   0.665   0.605  -0.261   0.497  C5   M89   4  
M89  C6   C3   C  0  1  N  N  N  -11.340  10.461   1.720   0.026  -1.262  -0.515  C6   M89   5  
M89  C7   C4   C  0  1  Y  N  N  -11.402  12.182   3.479  -2.260  -0.600  -0.060  C7   M89   6  
M89  C8   C5   C  0  1  Y  N  N  -10.468  13.036   2.803  -1.972   0.744   0.164  C8   M89   7  
M89  C10  C6   C  0  1  Y  N  N  -10.652  14.666   4.606  -4.314   1.282   0.174  C10  M89   8  
M89  C13  C7   C  0  1  N  N  N  -12.182  14.264   6.510  -5.980  -0.480  -0.186  C13  M89   9  
M89  C1   C8   C  0  1  N  N  N  -13.577  12.135   0.851   2.483   1.142  -0.209  C1   M89  10  
M89  C2   C9   C  0  1  N  N  N  -12.342  12.370   0.382   2.071  -0.046   0.225  C2   M89  11  
M89  N2   N3   N  0  1  N  N  N  -12.080  13.471  -0.412   2.953  -1.085   0.433  N2   M89  12  
M89  C3   C10  C  0  1  N  N  N  -13.023  14.349  -0.765   4.272  -0.905   0.203  C3   M89  13  
M89  O1   O1   O  0  1  N  N  N  -11.808  10.969   2.951  -1.313  -1.564  -0.152  O1   M89  14  
M89  S1   S1   S  0  1  N  N  N   -9.801  12.577   1.236  -0.301   1.303   0.285  S1   M89  15  
M89  C9   C11  C  0  1  Y  N  N  -11.582  13.835   5.266  -4.616  -0.062  -0.063  C9   M89  16  
M89  C11  C12  C  0  1  Y  N  N  -10.091  14.264   3.378  -3.001   1.675   0.285  C11  M89  17  
M89  C12  C13  C  0  1  Y  N  N  -11.948  12.596   4.708  -3.586  -0.996  -0.179  C12  M89  18  
M89  O2   O2   O  0  1  N  N  N  -15.415  14.781  -0.545   5.908   0.629  -0.517  O2   M89  19  
M89  O3   O3   O  0  1  N  N  N  -12.805  15.336  -1.460   5.063  -1.810   0.381  O3   M89  20  
M89  HN1  H1   H  0  1  N  N  N  -15.536  12.741   0.912   4.087   2.271  -0.789  HN1  M89  21  
M89  H5   H2   H  0  1  N  N  N  -10.780  11.058  -0.266   0.465  -0.635   1.511  H5   M89  22  
M89  H61  H3   H  0  1  N  N  N  -12.075   9.736   1.341   0.043  -0.824  -1.513  H61  M89  23  
M89  H62  H4   H  0  1  N  N  N  -10.380   9.953   1.896   0.621  -2.176  -0.505  H62  M89  24  
M89  H10  H5   H  0  1  N  N  N  -10.370  15.612   5.043  -5.109   2.008   0.270  H10  M89  25  
M89  H1   H6   H  0  1  N  N  N  -13.745  11.277   1.486   1.757   1.929  -0.358  H1   M89  26  
M89  HN2  H7   H  0  1  N  N  N  -11.145  13.616  -0.736   2.628  -1.942   0.750  HN2  M89  27  
M89  H11  H8   H  0  1  N  N  N   -9.373  14.897   2.879  -2.765   2.713   0.468  H11  M89  28  
M89  H12  H9   H  0  1  N  N  N  -12.651  11.960   5.225  -3.821  -2.034  -0.363  H12  M89  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M89  O3   C3   DOUB  N  N   1  
M89  C3   N2   SING  N  N   2  
M89  C3   C4   SING  N  N   3  
M89  O2   C4   DOUB  N  N   4  
M89  N2   C2   SING  N  N   5  
M89  C4   N1   SING  N  N   6  
M89  C2   C5   SING  N  N   7  
M89  C2   C1   DOUB  N  N   8  
M89  N1   C1   SING  N  N   9  
M89  C5   S1   SING  N  N  10  
M89  C5   C6   SING  N  N  11  
M89  S1   C8   SING  N  N  12  
M89  C6   O1   SING  N  N  13  
M89  C8   C11  SING  Y  N  14  
M89  C8   C7   DOUB  Y  N  15  
M89  O1   C7   SING  N  N  16  
M89  C11  C10  DOUB  Y  N  17  
M89  C7   C12  SING  Y  N  18  
M89  C10  C9   SING  Y  N  19  
M89  C12  C9   DOUB  Y  N  20  
M89  C9   C13  SING  N  N  21  
M89  C13  N3   TRIP  N  N  22  
M89  N1   HN1  SING  N  N  23  
M89  C5   H5   SING  N  N  24  
M89  C6   H61  SING  N  N  25  
M89  C6   H62  SING  N  N  26  
M89  C10  H10  SING  N  N  27  
M89  C1   H1   SING  N  N  28  
M89  N2   HN2  SING  N  N  29  
M89  C11  H11  SING  N  N  30  
M89  C12  H12  SING  N  N  31  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M89  SMILES            ACDLabs               12.01  "O=C1NC=C(NC1=O)C1COc2cc(ccc2S1)C#N"  
M89  InChI             InChI                 1.03   "InChI=1S/C13H9N3O3S/c14-4-7-1-2-10-9(3-7)19-6-11(20-10)8-5-15-12(17)13(18)16-8/h1-3,5,11H,6H2,(H,15,17)(H,16,18)/t11-/m0/s1"  
M89  InChIKey          InChI                 1.03   GRRZGHVZXKQFHU-NSHDSACASA-N  
M89  SMILES_CANONICAL  CACTVS                3.385  "O=C1NC=C(NC1=O)[C@@H]2COc3cc(ccc3S2)C#N"  
M89  SMILES            CACTVS                3.385  "O=C1NC=C(NC1=O)[CH]2COc3cc(ccc3S2)C#N"  
M89  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc2c(cc1C#N)OC[C@H](S2)C3=CNC(=O)C(=O)N3"  
M89  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc2c(cc1C#N)OCC(S2)C3=CNC(=O)C(=O)N3"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
M89  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R)-3-(5,6-dioxo-1,4,5,6-tetrahydropyrazin-2-yl)-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile"  
M89  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(3~{R})-3-[5,6-bis(oxidanylidene)-1,4-dihydropyrazin-2-yl]-2,3-dihydro-1,4-benzoxathiine-7-carbonitrile"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M89  "Create component"  2022-03-14  RCSB  
M89  "Initial release"   2022-06-08  RCSB  
##
