data_EW9
# 
_chem_comp.id                                    EW9 
_chem_comp.name                                  "(1S,2S)-2-{[N-({[7-(tert-butoxycarbonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H46 N4 O10 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        618.740 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     EW9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7T45 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
EW9 C10 C1  C 0 1 N N N N N N 7.337  27.911 25.420 -6.193  1.544  1.574  C10 EW9 1  
EW9 C16 C2  C 0 1 N N N N N N 9.876  26.068 25.783 -2.904  0.916  2.381  C16 EW9 2  
EW9 C20 C3  C 0 1 N N S N N N 12.207 22.090 26.993 1.652   -0.015 1.116  C20 EW9 3  
EW9 C21 C4  C 0 1 N N N N N N 10.889 21.512 27.519 2.435   -0.070 -0.170 C21 EW9 4  
EW9 C23 C5  C 0 1 N N S N N N 9.097  19.822 27.493 4.532   0.060  -1.404 C23 EW9 5  
EW9 C24 C6  C 0 1 N N S N N N 9.317  18.472 28.123 4.549   -1.398 -1.866 C24 EW9 6  
EW9 O25 O1  O 0 1 N N N N N N 8.067  17.971 28.533 5.396   -1.526 -3.009 O25 EW9 7  
EW9 C26 C7  C 0 1 N N N N N N 8.054  19.734 26.295 5.966   0.533  -1.157 C26 EW9 8  
EW9 C02 C8  C 0 1 N N N N N N 5.211  29.381 22.940 -7.831  -0.377 -0.875 C02 EW9 9  
EW9 C04 C9  C 0 1 N N N N N N 3.576  29.251 21.041 -10.067 -0.113 -1.666 C04 EW9 10 
EW9 C05 C10 C 0 1 N N N N N N 3.232  30.742 21.053 -10.212 -1.602 -1.989 C05 EW9 11 
EW9 C06 C11 C 0 1 N N N N N N 3.662  28.709 19.605 -9.619  0.639  -2.921 C06 EW9 12 
EW9 C07 C12 C 0 1 N N N N N N 2.429  28.484 21.797 -11.414 0.439  -1.194 C07 EW9 13 
EW9 C09 C13 C 0 1 N N N N N N 6.891  29.281 24.866 -7.160  0.374  1.355  C09 EW9 14 
EW9 C11 C14 C 0 1 N N N N N N 8.326  27.122 24.558 -4.760  1.054  1.377  C11 EW9 15 
EW9 C12 C15 C 0 1 N N N N N N 8.574  25.648 25.077 -4.247  0.181  2.529  C12 EW9 16 
EW9 C13 C16 C 0 1 N N N N N N 7.832  27.152 23.137 -4.522  0.444  -0.004 C13 EW9 17 
EW9 C14 C17 C 0 1 N N N N N N 7.544  28.561 22.585 -5.499  -0.719 -0.214 C14 EW9 18 
EW9 C15 C18 C 0 1 N N N N N N 9.776  27.433 24.956 -3.700  2.088  1.779  C15 EW9 19 
EW9 C18 C19 C 0 1 N N N N N N 11.182 24.009 25.789 -0.677  0.454  1.656  C18 EW9 20 
EW9 C27 C20 C 0 1 N N S N N N 7.677  21.068 25.756 5.962   2.030  -0.839 C27 EW9 21 
EW9 C28 C21 C 0 1 N N N N N N 6.709  21.019 24.572 7.369   2.520  -0.582 C28 EW9 22 
EW9 C30 C22 C 0 1 N N N N N N 5.732  22.601 25.976 6.386   4.101  -1.971 C30 EW9 23 
EW9 C31 C23 C 0 1 N N N N N N 6.808  21.859 26.791 5.496   2.843  -2.069 C31 EW9 24 
EW9 C34 C24 C 0 1 N N N N N N 13.299 21.783 27.989 2.063   -1.185 2.013  C34 EW9 25 
EW9 C35 C25 C 0 1 N N N N N N 14.674 22.275 27.587 3.501   -0.979 2.493  C35 EW9 26 
EW9 C36 C26 C 0 1 N N N N N N 15.125 21.668 26.286 3.572   0.276  3.366  C36 EW9 27 
EW9 C37 C27 C 0 1 N N N N N N 15.730 21.996 28.695 3.945   -2.194 3.310  C37 EW9 28 
EW9 N08 N1  N 0 1 N N N N N N 6.585  29.366 23.376 -6.865  -0.245 0.056  N08 EW9 29 
EW9 N19 N2  N 0 1 N N N N N N 12.027 23.537 26.721 0.220   -0.106 0.821  N19 EW9 30 
EW9 N22 N3  N 0 1 N N N N N N 10.335 20.369 27.013 3.761   0.170  -0.163 N22 EW9 31 
EW9 N29 N4  N 0 1 N N N N N N 5.645  21.838 24.697 7.581   3.678  -1.232 N29 EW9 32 
EW9 O01 O2  O 0 1 N N N N N N 4.319  29.721 23.720 -7.576  -0.890 -1.947 O01 EW9 33 
EW9 O03 O3  O 0 1 N N N N N N 4.882  28.998 21.649 -9.078  0.061  -0.618 O03 EW9 34 
EW9 O17 O4  O 0 1 N N N N N N 11.065 25.368 25.536 -1.995  0.285  1.441  O17 EW9 35 
EW9 O32 O5  O 0 1 N N N N N N 6.908  20.257 23.604 8.188   1.952  0.110  O32 EW9 36 
EW9 O33 O6  O 0 1 N N N N N N 10.314 22.149 28.432 1.871   -0.329 -1.212 O33 EW9 37 
EW9 O38 O7  O 0 1 N N N N N N 10.501 23.231 25.120 -0.296  1.112  2.605  O38 EW9 38 
EW9 SG  S1  S 0 1 N Y N N N N 10.121 17.363 26.953 5.177   -2.450 -0.527 SG  EW9 39 
EW9 H1  H1  H 0 1 N N N N N N 6.437  27.292 25.549 -6.410  2.335  0.857  H1  EW9 40 
EW9 H2  H2  H 0 1 N N N N N N 7.808  28.082 26.399 -6.310  1.928  2.588  H2  EW9 41 
EW9 H3  H3  H 0 1 N N N N N N 9.700  26.259 26.852 -2.429  1.155  3.332  H3  EW9 42 
EW9 H4  H4  H 0 1 N N N N N N 12.448 21.582 26.048 1.859   0.925  1.628  H4  EW9 43 
EW9 H5  H5  H 0 1 N N N N N N 8.671  20.495 28.252 4.073   0.680  -2.174 H5  EW9 44 
EW9 H6  H6  H 0 1 N N N N N N 10.003 18.570 28.977 3.537   -1.709 -2.127 H6  EW9 45 
EW9 H7  H7  H 0 1 N N N N N N 7.669  18.576 29.148 6.314   -1.267 -2.850 H7  EW9 46 
EW9 H8  H8  H 0 1 N N N N N N 7.145  19.232 26.658 6.390   -0.016 -0.316 H8  EW9 47 
EW9 H9  H9  H 0 1 N N N N N N 8.501  19.141 25.483 6.567   0.353  -2.048 H9  EW9 48 
EW9 H10 H10 H 0 1 N N N N N N 3.178  31.098 22.092 -10.532 -2.138 -1.095 H10 EW9 49 
EW9 H11 H11 H 0 1 N N N N N N 4.010  31.302 20.514 -10.954 -1.733 -2.776 H11 EW9 50 
EW9 H12 H12 H 0 1 N N N N N N 2.260  30.898 20.561 -9.253  -1.996 -2.325 H12 EW9 51 
EW9 H13 H13 H 0 1 N N N N N N 3.910  27.638 19.631 -10.361 0.508  -3.708 H13 EW9 52 
EW9 H14 H14 H 0 1 N N N N N N 2.694  28.849 19.102 -9.516  1.700  -2.691 H14 EW9 53 
EW9 H15 H15 H 0 1 N N N N N N 4.443  29.253 19.054 -8.659  0.245  -3.257 H15 EW9 54 
EW9 H16 H16 H 0 1 N N N N N N 2.353  28.860 22.828 -11.733 -0.097 -0.301 H16 EW9 55 
EW9 H17 H17 H 0 1 N N N N N N 1.474  28.647 21.276 -11.311 1.500  -0.965 H17 EW9 56 
EW9 H18 H18 H 0 1 N N N N N N 2.658  27.408 21.815 -12.156 0.309  -1.982 H18 EW9 57 
EW9 H19 H19 H 0 1 N N N N N N 7.694  30.001 25.080 -7.030  -0.361 2.148  H19 EW9 58 
EW9 H20 H20 H 0 1 N N N N N N 5.980  29.576 25.408 -8.186  0.742  1.362  H20 EW9 59 
EW9 H21 H21 H 0 1 N N N N N N 7.796  25.284 25.764 -4.193  -0.880 2.283  H21 EW9 60 
EW9 H22 H22 H 0 1 N N N N N N 8.724  24.914 24.271 -4.747  0.372  3.478  H22 EW9 61 
EW9 H23 H23 H 0 1 N N N N N N 6.902  26.567 23.085 -4.687  1.201  -0.770 H23 EW9 62 
EW9 H24 H24 H 0 1 N N N N N N 8.596  26.684 22.499 -3.498  0.077  -0.068 H24 EW9 63 
EW9 H25 H25 H 0 1 N N N N N N 8.496  29.111 22.543 -5.431  -1.072 -1.243 H25 EW9 64 
EW9 H26 H26 H 0 1 N N N N N N 7.139  28.452 21.568 -5.253  -1.531 0.470  H26 EW9 65 
EW9 H27 H27 H 0 1 N N N N N N 10.469 27.488 24.103 -4.049  2.806  2.521  H27 EW9 66 
EW9 H28 H28 H 0 1 N N N N N N 9.883  28.336 25.574 -3.206  2.561  0.930  H28 EW9 67 
EW9 H29 H29 H 0 1 N N N N N N 8.571  21.653 25.495 5.321   2.235  0.019  H29 EW9 68 
EW9 H30 H30 H 0 1 N N N N N N 6.034  23.642 25.789 6.662   4.447  -2.967 H30 EW9 69 
EW9 H31 H31 H 0 1 N N N N N N 4.767  22.589 26.503 5.865   4.891  -1.429 H31 EW9 70 
EW9 H32 H32 H 0 1 N N N N N N 6.336  21.164 27.501 5.690   2.298  -2.993 H32 EW9 71 
EW9 H33 H33 H 0 1 N N N N N N 7.432  22.578 27.341 4.440   3.104  -1.987 H33 EW9 72 
EW9 H34 H34 H 0 1 N N N N N N 13.032 22.254 28.947 1.396   -1.235 2.874  H34 EW9 73 
EW9 H35 H35 H 0 1 N N N N N N 13.349 20.692 28.118 1.998   -2.115 1.449  H35 EW9 74 
EW9 H36 H36 H 0 1 N N N N N N 14.617 23.365 27.453 4.158   -0.860 1.632  H36 EW9 75 
EW9 H37 H37 H 0 1 N N N N N N 16.124 22.049 26.030 2.958   0.136  4.255  H37 EW9 76 
EW9 H38 H38 H 0 1 N N N N N N 15.165 20.573 26.387 4.606   0.454  3.663  H38 EW9 77 
EW9 H39 H39 H 0 1 N N N N N N 14.415 21.937 25.490 3.204   1.133  2.801  H39 EW9 78 
EW9 H40 H40 H 0 1 N N N N N N 15.394 22.442 29.643 3.894   -3.088 2.689  H40 EW9 79 
EW9 H41 H41 H 0 1 N N N N N N 15.849 20.910 28.823 4.969   -2.047 3.653  H41 EW9 80 
EW9 H42 H42 H 0 1 N N N N N N 16.694 22.438 28.403 3.288   -2.312 4.172  H42 EW9 81 
EW9 H43 H43 H 0 1 N N N N N N 12.560 24.192 27.257 -0.082  -0.569 0.024  H43 EW9 82 
EW9 H44 H44 H 0 1 N N N N N N 10.813 19.892 26.275 4.205   0.416  0.664  H44 EW9 83 
EW9 H45 H45 H 0 1 N N N N N N 4.905  21.922 24.029 8.417   4.171  -1.214 H45 EW9 84 
EW9 O2  O8  O 0 1 N Y N N N N ?      ?      ?      5.266   -3.838 -1.145 O2  EW9 85 
EW9 O3  O9  O 0 1 N Y N N N N ?      ?      ?      6.524   -2.116 -0.222 O3  EW9 86 
EW9 O1  O10 O 0 1 N Y N N N N 9.994  15.784 27.776 4.204   -2.584 0.500  O1  EW9 87 
EW9 H46 H46 H 0 1 N Y N N N N ?      ?      ?      5.591   -4.518 -0.539 H46 EW9 88 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
EW9 C06 C04 SING N N 1  
EW9 C04 C05 SING N N 2  
EW9 C04 O03 SING N N 3  
EW9 C04 C07 SING N N 4  
EW9 O03 C02 SING N N 5  
EW9 C14 C13 SING N N 6  
EW9 C14 N08 SING N N 7  
EW9 C02 N08 SING N N 8  
EW9 C02 O01 DOUB N N 9  
EW9 C13 C11 SING N N 10 
EW9 N08 C09 SING N N 11 
EW9 O32 C28 DOUB N N 12 
EW9 C11 C15 SING N N 13 
EW9 C11 C12 SING N N 14 
EW9 C11 C10 SING N N 15 
EW9 C28 N29 SING N N 16 
EW9 C28 C27 SING N N 17 
EW9 N29 C30 SING N N 18 
EW9 C09 C10 SING N N 19 
EW9 C15 C16 SING N N 20 
EW9 C12 C16 SING N N 21 
EW9 O38 C18 DOUB N N 22 
EW9 O17 C16 SING N N 23 
EW9 O17 C18 SING N N 24 
EW9 C27 C26 SING N N 25 
EW9 C27 C31 SING N N 26 
EW9 C18 N19 SING N N 27 
EW9 C30 C31 SING N N 28 
EW9 C36 C35 SING N N 29 
EW9 C26 C23 SING N N 30 
EW9 N19 C20 SING N N 31 
EW9 SG  C24 SING N N 32 
EW9 C20 C21 SING N N 33 
EW9 C20 C34 SING N N 34 
EW9 N22 C23 SING N N 35 
EW9 N22 C21 SING N N 36 
EW9 C23 C24 SING N N 37 
EW9 C21 O33 DOUB N N 38 
EW9 C35 C34 SING N N 39 
EW9 C35 C37 SING N N 40 
EW9 C24 O25 SING N N 41 
EW9 C10 H1  SING N N 42 
EW9 C10 H2  SING N N 43 
EW9 C16 H3  SING N N 44 
EW9 C20 H4  SING N N 45 
EW9 C23 H5  SING N N 46 
EW9 C24 H6  SING N N 47 
EW9 O25 H7  SING N N 48 
EW9 C26 H8  SING N N 49 
EW9 C26 H9  SING N N 50 
EW9 C05 H10 SING N N 51 
EW9 C05 H11 SING N N 52 
EW9 C05 H12 SING N N 53 
EW9 C06 H13 SING N N 54 
EW9 C06 H14 SING N N 55 
EW9 C06 H15 SING N N 56 
EW9 C07 H16 SING N N 57 
EW9 C07 H17 SING N N 58 
EW9 C07 H18 SING N N 59 
EW9 C09 H19 SING N N 60 
EW9 C09 H20 SING N N 61 
EW9 C12 H21 SING N N 62 
EW9 C12 H22 SING N N 63 
EW9 C13 H23 SING N N 64 
EW9 C13 H24 SING N N 65 
EW9 C14 H25 SING N N 66 
EW9 C14 H26 SING N N 67 
EW9 C15 H27 SING N N 68 
EW9 C15 H28 SING N N 69 
EW9 C27 H29 SING N N 70 
EW9 C30 H30 SING N N 71 
EW9 C30 H31 SING N N 72 
EW9 C31 H32 SING N N 73 
EW9 C31 H33 SING N N 74 
EW9 C34 H34 SING N N 75 
EW9 C34 H35 SING N N 76 
EW9 C35 H36 SING N N 77 
EW9 C36 H37 SING N N 78 
EW9 C36 H38 SING N N 79 
EW9 C36 H39 SING N N 80 
EW9 C37 H40 SING N N 81 
EW9 C37 H41 SING N N 82 
EW9 C37 H42 SING N N 83 
EW9 N19 H43 SING N N 84 
EW9 N22 H44 SING N N 85 
EW9 N29 H45 SING N N 86 
EW9 SG  O2  SING N N 87 
EW9 SG  O3  DOUB N N 88 
EW9 SG  O1  DOUB N N 89 
EW9 O2  H46 SING N N 90 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
EW9 SMILES           ACDLabs              12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OC1CC2(CCN(CC2)C(=O)OC(C)(C)C)C1)C(O)S(=O)(=O)O"                                                                                                                                                               
EW9 InChI            InChI                1.03  "InChI=1S/C27H46N4O10S/c1-16(2)12-19(22(33)29-20(23(34)42(37,38)39)13-17-6-9-28-21(17)32)30-24(35)40-18-14-27(15-18)7-10-31(11-8-27)25(36)41-26(3,4)5/h16-20,23,34H,6-15H2,1-5H3,(H,28,32)(H,29,33)(H,30,35)(H,37,38,39)/t17-,19-,20-,23-/m0/s1" 
EW9 InChIKey         InChI                1.03  UCJPXTXBXDDVDN-UDSSINMLSA-N                                                                                                                                                                                                                      
EW9 SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)OC1CC2(CCN(CC2)C(=O)OC(C)(C)C)C1)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@@H](O)[S](O)(=O)=O"                                                                                                                                          
EW9 SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)OC1CC2(CCN(CC2)C(=O)OC(C)(C)C)C1)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O"                                                                                                                                                 
EW9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)C(=O)OC(C)(C)C"                                                                                                                                           
EW9 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC2CC3(C2)CCN(CC3)C(=O)OC(C)(C)C"                                                                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
EW9 "SYSTEMATIC NAME" ACDLabs              12.01 "(1S,2S)-2-{[N-({[7-(tert-butoxycarbonyl)-7-azaspiro[3.5]nonan-2-yl]oxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid"                                                      
EW9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-2-[[(2~{S})-4-methyl-2-[[7-[(2-methylpropan-2-yl)oxycarbonyl]-7-azaspiro[3.5]nonan-2-yl]oxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
EW9 "Create component" 2021-12-14 RCSB 
EW9 "Initial release"  2021-12-22 RCSB 
EW9 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            EW9 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C24 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
