data_C89
#

_chem_comp.id                                   C89
_chem_comp.name                                 "1-methyl-6-(3-(4-methylpiperazine-1-carbonyl)benzyl)-1,2a1,5a,6-tetrahydro-2H-pyrido[3',2':6,7]azepino[4,3,2-cd]isoindol-2-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H27 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-04-12
_chem_comp.pdbx_modified_date                   2020-02-21
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       465.546
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    C89
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6JJ6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C89  C1   C1   C  0  1  Y  N  N  21.975  30.383  39.586   2.422  -1.305   0.576  C1   C89   1  
C89  C11  C2   C  0  1  N  N  N  21.389  27.544  42.038   4.694  -3.203  -1.689  C11  C89   2  
C89  C13  C3   C  0  1  Y  N  N  24.934  31.378  39.866   2.749   1.719  -0.084  C13  C89   3  
C89  C15  C4   C  0  1  Y  N  N  27.218  31.724  40.433   3.282   3.810  -0.915  C15  C89   4  
C89  C16  C5   C  0  1  Y  N  N  27.208  30.717  41.383   4.169   3.280  -1.831  C16  C89   5  
C89  C17  C6   C  0  1  Y  N  N  26.032  30.011  41.589   4.371   1.908  -1.866  C17  C89   6  
C89  C18  C7   C  0  1  Y  N  N  24.871  30.270  40.864   3.634   1.107  -0.988  C18  C89   7  
C89  C19  C8   C  0  1  N  N  N  23.711  29.402  41.217   3.955  -0.319  -1.175  C19  C89   8  
C89  C2   C9   C  0  1  Y  N  N  20.562  30.076  39.350   2.167  -2.625   0.979  C2   C89   9  
C89  C20  C10  C  0  1  N  N  N  24.534  32.165  37.620   1.106   2.058   1.670  C20  C89  10  
C89  C21  C11  C  0  1  Y  N  N  24.347  31.098  36.520  -0.241   2.233   1.016  C21  C89  11  
C89  C22  C12  C  0  1  Y  N  N  23.421  31.283  35.490  -1.282   1.392   1.349  C22  C89  12  
C89  C23  C13  C  0  1  Y  N  N  23.204  30.348  34.466  -2.529   1.555   0.743  C23  C89  13  
C89  C24  C14  C  0  1  Y  N  N  23.952  29.174  34.470  -2.713   2.570  -0.198  C24  C89  14  
C89  C25  C15  C  0  1  Y  N  N  24.877  28.960  35.491  -1.663   3.404  -0.522  C25  C89  15  
C89  C26  C16  C  0  1  Y  N  N  25.073  29.912  36.499  -0.431   3.240   0.087  C26  C89  16  
C89  C27  C17  C  0  1  N  N  N  22.185  30.615  33.378  -3.649   0.657   1.095  C27  C89  17  
C89  C3   C18  C  0  1  Y  N  N  19.799  30.746  38.406   1.240  -2.845   1.999  C3   C89  18  
C89  C30  C19  C  0  1  N  N  N  23.259  32.696  32.681  -5.677  -0.576   0.478  C30  C89  19  
C89  C31  C20  C  0  1  N  N  N  22.991  34.032  33.370  -5.682  -1.848  -0.378  C31  C89  20  
C89  C33  C21  C  0  1  N  N  N  20.946  33.941  32.087  -4.289  -0.809  -2.070  C33  C89  21  
C89  C34  C22  C  0  1  N  N  N  20.795  32.597  32.829  -4.227   0.505  -1.283  C34  C89  22  
C89  C35  C23  C  0  1  N  N  N  21.682  36.052  33.082  -5.740  -2.655  -2.660  C35  C89  23  
C89  C4   C24  C  0  1  Y  N  N  20.426  31.760  37.688   0.600  -1.771   2.585  C4   C89  24  
C89  C5   C25  C  0  1  Y  N  N  21.762  32.115  37.914   0.858  -0.467   2.180  C5   C89  25  
C89  C6   C26  C  0  1  Y  N  N  22.590  31.480  38.848   1.770  -0.227   1.167  C6   C89  26  
C89  C7   C27  C  0  1  N  N  N  22.354  29.427  40.635   3.424  -1.368  -0.498  C7   C89  27  
C89  C9   C28  C  0  1  N  N  N  20.314  28.946  40.274   3.020  -3.480   0.143  C9   C89  28  
C89  N12  N1   N  0  1  N  N  N  23.961  31.740  38.915   1.919   1.135   0.874  N12  C89  29  
C89  N14  N2   N  0  1  Y  N  N  26.125  32.005  39.712   2.610   3.035  -0.083  N14  C89  30  
C89  N29  N3   N  0  1  N  N  N  22.076  31.894  32.976  -4.484   0.213   0.135  N29  C89  31  
C89  N32  N4   N  0  1  N  N  N  22.106  34.781  32.468  -5.567  -1.480  -1.796  N32  C89  32  
C89  N8   N5   N  0  1  N  N  N  21.360  28.594  41.003   3.733  -2.704  -0.701  N8   C89  33  
C89  O10  O1   O  0  1  N  N  N  19.094  28.389  40.341   3.075  -4.694   0.202  O10  C89  34  
C89  O28  O2   O  0  1  N  N  N  21.492  29.685  32.923  -3.817   0.319   2.251  O28  C89  35  
C89  H1   H1   H  0  1  N  N  N  22.399  27.482  42.470   5.684  -3.258  -1.236  H1   C89  36  
C89  H2   H2   H  0  1  N  N  N  20.666  27.789  42.830   4.391  -4.195  -2.022  H2   C89  37  
C89  H3   H3   H  0  1  N  N  N  21.124  26.577  41.586   4.721  -2.526  -2.542  H3   C89  38  
C89  H4   H4   H  0  1  N  N  N  28.122  32.292  40.271   3.125   4.878  -0.887  H4   C89  39  
C89  H5   H5   H  0  1  N  N  N  28.097  30.486  41.951   4.700   3.927  -2.514  H5   C89  40  
C89  H6   H6   H  0  1  N  N  N  26.016  29.233  42.338   5.059   1.467  -2.572  H6   C89  41  
C89  H7   H7   H  0  1  N  N  N  23.884  28.668  41.990   4.677  -0.555  -1.943  H7   C89  42  
C89  H8   H8   H  0  1  N  N  N  25.610  32.352  37.753   1.607   3.024   1.732  H8   C89  43  
C89  H9   H9   H  0  1  N  N  N  24.038  33.093  37.301   0.973   1.653   2.673  H9   C89  44  
C89  H10  H10  H  0  1  N  N  N  22.841  32.194  35.481  -1.133   0.608   2.078  H10  C89  45  
C89  H11  H11  H  0  1  N  N  N  23.817  28.438  33.691  -3.675   2.701  -0.671  H11  C89  46  
C89  H12  H12  H  0  1  N  N  N  25.451  28.046  35.505  -1.804   4.189  -1.250  H12  C89  47  
C89  H13  H13  H  0  1  N  N  N  25.801  29.722  37.274   0.387   3.896  -0.170  H13  C89  48  
C89  H14  H14  H  0  1  N  N  N  18.763  30.492  38.235   1.024  -3.850   2.329  H14  C89  49  
C89  H15  H15  H  0  1  N  N  N  24.163  32.221  33.090  -6.574   0.007   0.271  H15  C89  50  
C89  H16  H16  H  0  1  N  N  N  23.376  32.834  31.596  -5.647  -0.846   1.534  H16  C89  51  
C89  H17  H17  H  0  1  N  N  N  23.933  34.579  33.523  -4.840  -2.479  -0.096  H17  C89  52  
C89  H18  H18  H  0  1  N  N  N  22.499  33.870  34.341  -6.613  -2.391  -0.217  H18  C89  53  
C89  H19  H19  H  0  1  N  N  N  20.034  34.528  32.270  -4.210  -0.599  -3.136  H19  C89  54  
C89  H20  H20  H  0  1  N  N  N  21.031  33.722  31.012  -3.466  -1.455  -1.764  H20  C89  55  
C89  H21  H21  H  0  1  N  N  N  20.381  32.790  33.830  -3.238   0.950  -1.392  H21  C89  56  
C89  H22  H22  H  0  1  N  N  N  20.103  31.956  32.263  -4.984   1.192  -1.659  H22  C89  57  
C89  H23  H23  H  0  1  N  N  N  22.569  36.645  33.350  -4.929  -3.361  -2.480  H23  C89  58  
C89  H24  H24  H  0  1  N  N  N  21.066  36.617  32.367  -6.694  -3.133  -2.436  H24  C89  59  
C89  H25  H25  H  0  1  N  N  N  21.094  35.843  33.988  -5.726  -2.344  -3.704  H25  C89  60  
C89  H26  H26  H  0  1  N  N  N  19.865  32.290  36.933  -0.113  -1.948   3.376  H26  C89  61  
C89  H27  H27  H  0  1  N  N  N  22.178  32.926  37.334   0.345   0.357   2.653  H27  C89  62  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C89  C33  N32  SING  N  N   1  
C89  C33  C34  SING  N  N   2  
C89  N32  C35  SING  N  N   3  
C89  N32  C31  SING  N  N   4  
C89  C30  N29  SING  N  N   5  
C89  C30  C31  SING  N  N   6  
C89  C34  N29  SING  N  N   7  
C89  O28  C27  DOUB  N  N   8  
C89  N29  C27  SING  N  N   9  
C89  C27  C23  SING  N  N  10  
C89  C23  C24  SING  Y  N  11  
C89  C23  C22  DOUB  Y  N  12  
C89  C24  C25  DOUB  Y  N  13  
C89  C22  C21  SING  Y  N  14  
C89  C25  C26  SING  Y  N  15  
C89  C26  C21  DOUB  Y  N  16  
C89  C21  C20  SING  N  N  17  
C89  C20  N12  SING  N  N  18  
C89  C4   C5   DOUB  Y  N  19  
C89  C4   C3   SING  Y  N  20  
C89  C5   C6   SING  Y  N  21  
C89  C3   C2   DOUB  Y  N  22  
C89  C6   N12  SING  N  N  23  
C89  C6   C1   DOUB  Y  N  24  
C89  N12  C13  SING  N  N  25  
C89  C2   C1   SING  Y  N  26  
C89  C2   C9   SING  N  N  27  
C89  C1   C7   SING  N  N  28  
C89  N14  C13  SING  Y  N  29  
C89  N14  C15  DOUB  Y  N  30  
C89  C13  C18  DOUB  Y  N  31  
C89  C9   O10  DOUB  N  N  32  
C89  C9   N8   SING  N  N  33  
C89  C15  C16  SING  Y  N  34  
C89  C7   N8   SING  N  N  35  
C89  C7   C19  DOUB  N  N  36  
C89  C18  C19  SING  N  N  37  
C89  C18  C17  SING  Y  N  38  
C89  N8   C11  SING  N  N  39  
C89  C16  C17  DOUB  Y  N  40  
C89  C11  H1   SING  N  N  41  
C89  C11  H2   SING  N  N  42  
C89  C11  H3   SING  N  N  43  
C89  C15  H4   SING  N  N  44  
C89  C16  H5   SING  N  N  45  
C89  C17  H6   SING  N  N  46  
C89  C19  H7   SING  N  N  47  
C89  C20  H8   SING  N  N  48  
C89  C20  H9   SING  N  N  49  
C89  C22  H10  SING  N  N  50  
C89  C24  H11  SING  N  N  51  
C89  C25  H12  SING  N  N  52  
C89  C26  H13  SING  N  N  53  
C89  C3   H14  SING  N  N  54  
C89  C30  H15  SING  N  N  55  
C89  C30  H16  SING  N  N  56  
C89  C31  H17  SING  N  N  57  
C89  C31  H18  SING  N  N  58  
C89  C33  H19  SING  N  N  59  
C89  C33  H20  SING  N  N  60  
C89  C34  H21  SING  N  N  61  
C89  C34  H22  SING  N  N  62  
C89  C35  H23  SING  N  N  63  
C89  C35  H24  SING  N  N  64  
C89  C35  H25  SING  N  N  65  
C89  C4   H26  SING  N  N  66  
C89  C5   H27  SING  N  N  67  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C89  InChI             InChI                 1.03   "InChI=1S/C28H27N5O2/c1-30-12-14-32(15-13-30)27(34)21-7-3-6-19(16-21)18-33-23-10-4-9-22-25(23)24(31(2)28(22)35)17-20-8-5-11-29-26(20)33/h3-11,16-17H,12-15,18H2,1-2H3"  
C89  InChIKey          InChI                 1.03   JRPANEMUMWGKLR-UHFFFAOYSA-N  
C89  SMILES_CANONICAL  CACTVS                3.385  "CN1CCN(CC1)C(=O)c2cccc(CN3c4cccc5C(=O)N(C)C(=Cc6cccnc36)c45)c2"  
C89  SMILES            CACTVS                3.385  "CN1CCN(CC1)C(=O)c2cccc(CN3c4cccc5C(=O)N(C)C(=Cc6cccnc36)c45)c2"  
C89  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CN1CCN(CC1)C(=O)c2cccc(c2)CN3c4cccc5c4C(=Cc6c3nccc6)N(C5=O)C"  
C89  SMILES            "OpenEye OEToolkits"  2.0.6  "CN1CCN(CC1)C(=O)c2cccc(c2)CN3c4cccc5c4C(=Cc6c3nccc6)N(C5=O)C"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C89  "Create component"  2019-04-12  PDBJ  
C89  "Initial release"   2020-02-26  RCSB  
##
