data_2S9
# 
_chem_comp.id                                    2S9 
_chem_comp.name                                  "4-(3-{4-[(R)-cyclopentyl(3-fluorophenyl)hydroxymethyl]piperidin-1-yl}propoxy)benzonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H33 F N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-01-16 
_chem_comp.pdbx_modified_date                    2014-02-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        436.562 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2S9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4OG6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2S9 CAL CAL C 0 1 Y N N -17.183 8.929  -11.281 -4.157 1.444  -0.800 CAL 2S9 1  
2S9 CAY CAY C 0 1 Y N N -17.840 8.174  -12.263 -4.173 2.814  -0.998 CAY 2S9 2  
2S9 FAC FAC F 0 1 N N N -19.202 7.905  -12.215 -4.291 3.316  -2.247 FAC 2S9 3  
2S9 CAF CAF C 0 1 Y N N -17.136 7.661  -13.337 -4.070 3.670  0.086  CAF 2S9 4  
2S9 CAE CAE C 0 1 Y N N -15.780 7.902  -13.428 -3.950 3.156  1.363  CAE 2S9 5  
2S9 CAI CAI C 0 1 Y N N -15.116 8.655  -12.451 -3.934 1.788  1.559  CAI 2S9 6  
2S9 CBB CBB C 0 1 Y N N -15.807 9.182  -11.359 -4.043 0.932  0.478  CBB 2S9 7  
2S9 CBF CBF C 0 1 N N R -15.152 9.949  -10.355 -4.024 -0.559 0.694  CBF 2S9 8  
2S9 CBC CBC C 0 1 N N N -14.451 9.020  -9.296  -5.022 -1.224 -0.257 CBC 2S9 9  
2S9 CAQ CAQ C 0 1 N N N -13.400 7.981  -9.761  -6.466 -0.756 0.047  CAQ 2S9 10 
2S9 CAM CAM C 0 1 N N N -13.231 6.985  -8.562  -7.355 -1.890 -0.503 CAM 2S9 11 
2S9 CAN CAN C 0 1 N N N -14.493 7.138  -7.765  -6.483 -3.158 -0.532 CAN 2S9 12 
2S9 CAR CAR C 0 1 N N N -15.415 8.086  -8.566  -5.095 -2.749 0.002  CAR 2S9 13 
2S9 OAB OAB O 0 1 N N N -16.130 10.743 -9.685  -4.389 -0.850 2.045  OAB 2S9 14 
2S9 CBD CBD C 0 1 N N N -14.080 10.916 -10.953 -2.619 -1.097 0.417  CBD 2S9 15 
2S9 CAT CAT C 0 1 N N N -14.717 12.053 -11.751 -2.247 -0.829 -1.044 CAT 2S9 16 
2S9 CAW CAW C 0 1 N N N -13.626 12.907 -12.417 -0.818 -1.315 -1.298 CAW 2S9 17 
2S9 CAS CAS C 0 1 N N N -13.160 11.565 -9.918  -1.612 -0.392 1.330  CAS 2S9 18 
2S9 CAV CAV C 0 1 N N N -12.101 12.434 -10.624 -0.202 -0.890 1.006  CAV 2S9 19 
2S9 NBE NBE N 0 1 N N N -12.688 13.511 -11.449 0.107  -0.610 -0.402 NBE 2S9 20 
2S9 CAU CAU C 0 1 N N N -11.623 14.216 -12.190 1.502  -0.949 -0.712 CAU 2S9 21 
2S9 CAO CAO C 0 1 N N N -10.533 14.773 -11.262 2.437  -0.019 0.063  CAO 2S9 22 
2S9 CAP CAP C 0 1 N N N -9.695  15.833 -11.998 3.891  -0.372 -0.260 CAP 2S9 23 
2S9 OAX OAX O 0 1 N N N -10.561 16.877 -12.453 4.764  0.497  0.464  OAX 2S9 24 
2S9 CBA CBA C 0 1 Y N N -9.940  17.995 -12.914 6.098  0.315  0.288  CBA 2S9 25 
2S9 CAJ CAJ C 0 1 Y N N -10.723 19.078 -13.295 7.002  1.126  0.963  CAJ 2S9 26 
2S9 CAG CAG C 0 1 Y N N -10.130 20.239 -13.772 8.356  0.946  0.788  CAG 2S9 27 
2S9 CAZ CAZ C 0 1 Y N N -8.748  20.319 -13.871 8.821  -0.054 -0.070 CAZ 2S9 28 
2S9 CAD CAD C 0 1 N N N -8.149  21.523 -14.365 10.228 -0.246 -0.255 CAD 2S9 29 
2S9 NAA NAA N 0 1 N N N -7.684  22.488 -14.761 11.344 -0.398 -0.402 NAA 2S9 30 
2S9 CAH CAH C 0 1 Y N N -7.960  19.236 -13.491 7.908  -0.868 -0.747 CAH 2S9 31 
2S9 CAK CAK C 0 1 Y N N -8.555  18.071 -13.012 6.555  -0.684 -0.562 CAK 2S9 32 
2S9 H1  H1  H 0 1 N N N -17.748 9.323  -10.449 -4.237 0.776  -1.645 H1  2S9 33 
2S9 H2  H2  H 0 1 N N N -17.640 7.080  -14.094 -4.082 4.739  -0.067 H2  2S9 34 
2S9 H3  H3  H 0 1 N N N -15.223 7.505  -14.264 -3.869 3.823  2.208  H3  2S9 35 
2S9 H4  H4  H 0 1 N N N -14.054 8.830  -12.544 -3.840 1.387  2.557  H4  2S9 36 
2S9 H5  H5  H 0 1 N N N -13.974 9.671  -8.548  -4.757 -1.021 -1.295 H5  2S9 37 
2S9 H6  H6  H 0 1 N N N -13.756 7.448  -10.655 -6.613 -0.643 1.121  H6  2S9 38 
2S9 H7  H7  H 0 1 N N N -12.444 8.476  -9.986  -6.681 0.181  -0.468 H7  2S9 39 
2S9 H8  H8  H 0 1 N N N -13.124 5.953  -8.926  -8.214 -2.043 0.151  H8  2S9 40 
2S9 H9  H9  H 0 1 N N N -12.353 7.252  -7.955  -7.692 -1.646 -1.510 H9  2S9 41 
2S9 H10 H10 H 0 1 N N N -14.268 7.572  -6.779  -6.918 -3.925 0.109  H10 2S9 42 
2S9 H11 H11 H 0 1 N N N -14.978 6.160  -7.633  -6.397 -3.529 -1.553 H11 2S9 43 
2S9 H12 H12 H 0 1 N N N -16.072 8.654  -7.891  -4.308 -3.267 -0.546 H12 2S9 44 
2S9 H13 H13 H 0 1 N N N -16.028 7.520  -9.283  -5.019 -2.959 1.069  H13 2S9 45 
2S9 H14 H14 H 0 1 N N N -15.709 11.262 -9.010  -3.798 -0.459 2.704  H14 2S9 46 
2S9 H15 H15 H 0 1 N N N -13.453 10.330 -11.641 -2.596 -2.170 0.609  H15 2S9 47 
2S9 H16 H16 H 0 1 N N N -15.311 12.685 -11.074 -2.935 -1.364 -1.699 H16 2S9 48 
2S9 H17 H17 H 0 1 N N N -15.372 11.630 -12.527 -2.310 0.240  -1.245 H17 2S9 49 
2S9 H18 H18 H 0 1 N N N -13.054 12.268 -13.106 -0.760 -2.387 -1.111 H18 2S9 50 
2S9 H19 H19 H 0 1 N N N -14.112 13.715 -12.984 -0.545 -1.112 -2.334 H19 2S9 51 
2S9 H20 H20 H 0 1 N N N -13.758 12.196 -9.244  -1.664 0.684  1.166  H20 2S9 52 
2S9 H21 H21 H 0 1 N N N -12.657 10.780 -9.335  -1.847 -0.614 2.371  H21 2S9 53 
2S9 H22 H22 H 0 1 N N N -11.494 11.787 -11.274 0.519  -0.380 1.645  H22 2S9 54 
2S9 H23 H23 H 0 1 N N N -11.457 12.891 -9.858  -0.147 -1.965 1.183  H23 2S9 55 
2S9 H25 H25 H 0 1 N N N -11.159 13.512 -12.897 1.697  -1.982 -0.426 H25 2S9 56 
2S9 H26 H26 H 0 1 N N N -12.073 15.051 -12.747 1.675  -0.829 -1.782 H26 2S9 57 
2S9 H27 H27 H 0 1 N N N -11.006 15.232 -10.381 2.242  1.014  -0.223 H27 2S9 58 
2S9 H28 H28 H 0 1 N N N -9.877  13.951 -10.939 2.264  -0.139 1.133  H28 2S9 59 
2S9 H29 H29 H 0 1 N N N -9.190  15.371 -12.859 4.086  -1.405 0.026  H29 2S9 60 
2S9 H30 H30 H 0 1 N N N -8.943  16.250 -11.312 4.064  -0.252 -1.330 H30 2S9 61 
2S9 H31 H31 H 0 1 N N N -11.799 19.016 -13.220 6.643  1.899  1.626  H31 2S9 62 
2S9 H32 H32 H 0 1 N N N -10.743 21.078 -14.065 9.059  1.577  1.313  H32 2S9 63 
2S9 H33 H33 H 0 1 N N N -6.885  19.299 -13.568 8.262  -1.642 -1.412 H33 2S9 64 
2S9 H34 H34 H 0 1 N N N -7.943  17.231 -12.718 5.849  -1.313 -1.084 H34 2S9 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2S9 NAA CAD TRIP N N 1  
2S9 CAD CAZ SING N N 2  
2S9 CAZ CAG DOUB Y N 3  
2S9 CAZ CAH SING Y N 4  
2S9 CAG CAJ SING Y N 5  
2S9 CAH CAK DOUB Y N 6  
2S9 CAE CAF DOUB Y N 7  
2S9 CAE CAI SING Y N 8  
2S9 CAF CAY SING Y N 9  
2S9 CAJ CBA DOUB Y N 10 
2S9 CAK CBA SING Y N 11 
2S9 CBA OAX SING N N 12 
2S9 OAX CAP SING N N 13 
2S9 CAI CBB DOUB Y N 14 
2S9 CAW CAT SING N N 15 
2S9 CAW NBE SING N N 16 
2S9 CAY FAC SING N N 17 
2S9 CAY CAL DOUB Y N 18 
2S9 CAU NBE SING N N 19 
2S9 CAU CAO SING N N 20 
2S9 CAP CAO SING N N 21 
2S9 CAT CBD SING N N 22 
2S9 NBE CAV SING N N 23 
2S9 CBB CAL SING Y N 24 
2S9 CBB CBF SING N N 25 
2S9 CBD CBF SING N N 26 
2S9 CBD CAS SING N N 27 
2S9 CAV CAS SING N N 28 
2S9 CBF OAB SING N N 29 
2S9 CBF CBC SING N N 30 
2S9 CAQ CBC SING N N 31 
2S9 CAQ CAM SING N N 32 
2S9 CBC CAR SING N N 33 
2S9 CAR CAN SING N N 34 
2S9 CAM CAN SING N N 35 
2S9 CAL H1  SING N N 36 
2S9 CAF H2  SING N N 37 
2S9 CAE H3  SING N N 38 
2S9 CAI H4  SING N N 39 
2S9 CBC H5  SING N N 40 
2S9 CAQ H6  SING N N 41 
2S9 CAQ H7  SING N N 42 
2S9 CAM H8  SING N N 43 
2S9 CAM H9  SING N N 44 
2S9 CAN H10 SING N N 45 
2S9 CAN H11 SING N N 46 
2S9 CAR H12 SING N N 47 
2S9 CAR H13 SING N N 48 
2S9 OAB H14 SING N N 49 
2S9 CBD H15 SING N N 50 
2S9 CAT H16 SING N N 51 
2S9 CAT H17 SING N N 52 
2S9 CAW H18 SING N N 53 
2S9 CAW H19 SING N N 54 
2S9 CAS H20 SING N N 55 
2S9 CAS H21 SING N N 56 
2S9 CAV H22 SING N N 57 
2S9 CAV H23 SING N N 58 
2S9 CAU H25 SING N N 59 
2S9 CAU H26 SING N N 60 
2S9 CAO H27 SING N N 61 
2S9 CAO H28 SING N N 62 
2S9 CAP H29 SING N N 63 
2S9 CAP H30 SING N N 64 
2S9 CAJ H31 SING N N 65 
2S9 CAG H32 SING N N 66 
2S9 CAH H33 SING N N 67 
2S9 CAK H34 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2S9 SMILES           ACDLabs              12.01 "Fc1cccc(c1)C(O)(C3CCN(CCCOc2ccc(C#N)cc2)CC3)C4CCCC4"                                                                                                                      
2S9 InChI            InChI                1.03  "InChI=1S/C27H33FN2O2/c28-25-8-3-7-24(19-25)27(31,22-5-1-2-6-22)23-13-16-30(17-14-23)15-4-18-32-26-11-9-21(20-29)10-12-26/h3,7-12,19,22-23,31H,1-2,4-6,13-18H2/t27-/m1/s1" 
2S9 InChIKey         InChI                1.03  FTSMDZBUBLYVKI-HHHXNRCGSA-N                                                                                                                                                
2S9 SMILES_CANONICAL CACTVS               3.385 "O[C@](C1CCCC1)(C2CCN(CCCOc3ccc(cc3)C#N)CC2)c4cccc(F)c4"                                                                                                                   
2S9 SMILES           CACTVS               3.385 "O[C](C1CCCC1)(C2CCN(CCCOc3ccc(cc3)C#N)CC2)c4cccc(F)c4"                                                                                                                    
2S9 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(cc(c1)F)[C@@](C2CCCC2)(C3CCN(CC3)CCCOc4ccc(cc4)C#N)O"                                                                                                                
2S9 SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc(cc(c1)F)C(C2CCCC2)(C3CCN(CC3)CCCOc4ccc(cc4)C#N)O"                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2S9 "SYSTEMATIC NAME" ACDLabs              12.01 "4-(3-{4-[(R)-cyclopentyl(3-fluorophenyl)hydroxymethyl]piperidin-1-yl}propoxy)benzonitrile"            
2S9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[3-[4-[(R)-cyclopentyl-(3-fluorophenyl)-oxidanyl-methyl]piperidin-1-yl]propoxy]benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2S9 "Create component" 2014-01-16 RCSB 
2S9 "Initial release"  2014-03-05 RCSB 
# 
