data_JO8
#

_chem_comp.id                                   JO8
_chem_comp.name                                 "3-azanyl-2-[[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]carbamoyl]benzoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H11 N3 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-13
_chem_comp.pdbx_modified_date                   2019-08-02
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       277.233
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JO8
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6R0U
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JO8  O2   O1   O  0  1  N  N  N  23.025  10.789  25.302  -4.997   0.795  -1.566  O2   JO8   1  
JO8  C4   C1   C  0  1  N  N  N  23.148  11.869  25.840  -4.075   0.512  -0.831  C4   JO8   2  
JO8  N2   N1   N  0  1  N  N  N  22.338  12.875  25.648  -3.974  -0.612  -0.111  N2   JO8   3  
JO8  C5   C2   C  0  1  N  N  N  22.818  13.995  26.166  -2.860  -0.699   0.628  C5   JO8   4  
JO8  O3   O2   O  0  1  N  N  N  22.191  15.081  26.112  -2.568  -1.628   1.350  O3   JO8   5  
JO8  C3   C3   C  0  1  N  N  N  24.369  12.247  26.657  -2.853   1.372  -0.586  C3   JO8   6  
JO8  C2   C4   C  0  1  N  N  S  24.206  13.765  26.716  -2.024   0.544   0.417  C2   JO8   7  
JO8  N1   N2   N  0  1  N  N  N  24.276  14.482  27.949  -0.722   0.199  -0.158  N1   JO8   8  
JO8  C1   C5   C  0  1  N  N  N  24.930  15.660  28.078   0.301  -0.146   0.648  C1   JO8   9  
JO8  O1   O3   O  0  1  N  N  N  25.657  16.224  27.288   0.143  -0.170   1.854  O1   JO8  10  
JO8  C6   C6   C  0  1  Y  N  N  24.864  16.451  29.338   1.612  -0.494   0.069  C6   JO8  11  
JO8  C11  C7   C  0  1  Y  N  N  25.975  17.054  29.942   2.585   0.504  -0.137  C11  JO8  12  
JO8  C12  C8   C  0  1  N  N  N  27.397  16.776  29.443   2.298   1.908   0.228  C12  JO8  13  
JO8  O4   O4   O  0  1  N  N  N  27.817  15.576  29.463   3.231   2.859   0.030  O4   JO8  14  
JO8  O5   O5   O  0  1  N  N  N  28.120  17.701  29.000   1.221   2.203   0.706  O5   JO8  15  
JO8  C7   C9   C  0  1  Y  N  N  23.591  16.697  29.725   1.902  -1.819  -0.276  C7   JO8  16  
JO8  N3   N3   N  0  1  N  N  N  22.632  16.045  29.014   0.955  -2.814  -0.074  N3   JO8  17  
JO8  C8   C10  C  0  1  Y  N  N  23.333  17.463  30.850   3.142  -2.137  -0.822  C8   JO8  18  
JO8  C9   C11  C  0  1  Y  N  N  24.416  18.029  31.531   4.087  -1.152  -1.025  C9   JO8  19  
JO8  C10  C12  C  0  1  Y  N  N  25.735  17.838  31.083   3.817   0.162  -0.684  C10  JO8  20  
JO8  H1   H1   H  0  1  N  N  N  21.463  12.808  25.169  -4.651  -1.306  -0.123  H1   JO8  21  
JO8  H2   H2   H  0  1  N  N  N  24.342  11.796  27.660  -2.299   1.522  -1.513  H2   JO8  22  
JO8  H3   H3   H  0  1  N  N  N  25.302  11.958  26.151  -3.138   2.328  -0.149  H3   JO8  23  
JO8  H4   H4   H  0  1  N  N  N  24.925  14.204  26.008  -1.899   1.086   1.355  H4   JO8  24  
JO8  H5   H5   H  0  1  N  N  N  23.822  14.097  28.752  -0.596   0.218  -1.120  H5   JO8  25  
JO8  H6   H6   H  0  1  N  N  N  28.698  15.542  29.109   2.997   3.763   0.283  H6   JO8  26  
JO8  H7   H7   H  0  1  N  N  N  21.730  16.288  29.370   0.090  -2.592   0.307  H7   JO8  27  
JO8  H8   H8   H  0  1  N  N  N  22.693  16.310  28.052   1.157  -3.732  -0.313  H8   JO8  28  
JO8  H9   H9   H  0  1  N  N  N  22.321  17.619  31.193   3.367  -3.159  -1.088  H9   JO8  29  
JO8  H10  H10  H  0  1  N  N  N  24.236  18.622  32.415   5.046  -1.409  -1.449  H10  JO8  30  
JO8  H11  H11  H  0  1  N  N  N  26.559  18.292  31.613   4.565   0.925  -0.843  H11  JO8  31  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JO8  O2   C4   DOUB  N  N   1  
JO8  N2   C4   SING  N  N   2  
JO8  N2   C5   SING  N  N   3  
JO8  C4   C3   SING  N  N   4  
JO8  O3   C5   DOUB  N  N   5  
JO8  C5   C2   SING  N  N   6  
JO8  C3   C2   SING  N  N   7  
JO8  C2   N1   SING  N  N   8  
JO8  O1   C1   DOUB  N  N   9  
JO8  N1   C1   SING  N  N  10  
JO8  C1   C6   SING  N  N  11  
JO8  O5   C12  DOUB  N  N  12  
JO8  N3   C7   SING  N  N  13  
JO8  C6   C7   DOUB  Y  N  14  
JO8  C6   C11  SING  Y  N  15  
JO8  C12  O4   SING  N  N  16  
JO8  C12  C11  SING  N  N  17  
JO8  C7   C8   SING  Y  N  18  
JO8  C11  C10  DOUB  Y  N  19  
JO8  C8   C9   DOUB  Y  N  20  
JO8  C10  C9   SING  Y  N  21  
JO8  N2   H1   SING  N  N  22  
JO8  C3   H2   SING  N  N  23  
JO8  C3   H3   SING  N  N  24  
JO8  C2   H4   SING  N  N  25  
JO8  N1   H5   SING  N  N  26  
JO8  O4   H6   SING  N  N  27  
JO8  N3   H7   SING  N  N  28  
JO8  N3   H8   SING  N  N  29  
JO8  C8   H9   SING  N  N  30  
JO8  C9   H10  SING  N  N  31  
JO8  C10  H11  SING  N  N  32  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JO8  InChI             InChI                 1.03   "InChI=1S/C12H11N3O5/c13-6-3-1-2-5(12(19)20)9(6)11(18)14-7-4-8(16)15-10(7)17/h1-3,7H,4,13H2,(H,14,18)(H,19,20)(H,15,16,17)/t7-/m0/s1"  
JO8  InChIKey          InChI                 1.03   OHXATMBWWVLISO-ZETCQYMHSA-N  
JO8  SMILES_CANONICAL  CACTVS                3.385  "Nc1cccc(C(O)=O)c1C(=O)N[C@H]2CC(=O)NC2=O"  
JO8  SMILES            CACTVS                3.385  "Nc1cccc(C(O)=O)c1C(=O)N[CH]2CC(=O)NC2=O"  
JO8  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(c(c(c1)N)C(=O)N[C@H]2CC(=O)NC2=O)C(=O)O"  
JO8  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(c(c(c1)N)C(=O)NC2CC(=O)NC2=O)C(=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          JO8
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "3-azanyl-2-[[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]carbamoyl]benzoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JO8  "Create component"  2019-03-13  EBI   
JO8  "Initial release"   2019-08-07  RCSB  
##
