data_HM8
# 
_chem_comp.id                                    HM8 
_chem_comp.name                                  "2-[(1S,2R)-1-amino-2-(sulfooxy)propyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C7 H10 N2 O7 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-04-18 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        298.294 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HM8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2YGI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HM8 N    N    N 0 1 N N N Y Y N -2.194 10.889 -3.352 -1.326 2.645  -1.341 N    HM8 1  
HM8 CA   CAA  C 0 1 N N S Y N N -2.950 9.927  -2.594 -0.960 2.051  -0.048 CAA  HM8 2  
HM8 CAV  CAV  C 0 1 N N R N N N -2.171 8.606  -2.453 -2.097 1.153  0.442  CAV  HM8 3  
HM8 CAW  CAW  C 0 1 N N N N N N -2.834 7.571  -1.542 -3.398 1.957  0.486  CAW  HM8 4  
HM8 OBW  OBW  O 0 1 N N N N N N -2.128 8.047  -3.789 -2.250 0.049  -0.451 OBW  HM8 5  
HM8 SBV  SBV  S 0 1 N N N N N N -0.685 7.724  -4.418 -2.652 -1.250 0.233  SBV  HM8 6  
HM8 OBZ  OBZ  O 0 1 N N N N N N -0.050 6.838  -3.485 -2.563 -2.269 -0.754 OBZ  HM8 7  
HM8 OBY  OBY  O 0 1 N N N N N N 0.000  8.950  -4.564 -1.939 -1.293 1.462  OBY  HM8 8  
HM8 OBX  OBX  O 0 1 N N N N N N -1.076 7.085  -5.655 -4.126 -1.131 0.595  OBX  HM8 9  
HM8 CAZ  CAZ  C 0 1 Y N N Y N N -3.326 10.434 -1.220 0.294  1.231  -0.209 CAZ  HM8 10 
HM8 NBA  NBA  N 0 1 Y N N Y N N -2.560 10.891 -0.316 1.309  1.251  0.599  NBA  HM8 11 
HM8 OBB  OBB  O 0 1 Y N N N N N -4.607 10.175 -0.788 0.527  0.364  -1.208 OBB  HM8 12 
HM8 CBC  CBC  C 0 1 Y N N N N N -4.608 10.536 0.615  1.742  -0.179 -1.021 CBC  HM8 13 
HM8 OBD  OBD  O 0 1 N N N N N N -5.632 10.405 1.255  2.347  -1.099 -1.808 OBD  HM8 14 
HM8 CAB  CAB  C 0 1 Y N N Y N N -3.304 10.995 0.838  2.253  0.383  0.135  CAB  HM8 15 
HM8 C    C    C 0 1 N N N Y N Y -2.752 11.442 2.078  3.553  0.098  0.745  C    HM8 16 
HM8 SBG  SBG  S 0 1 N N N Y N Y -1.155 12.041 2.126  4.613  -1.030 0.014  SBG  HM8 17 
HM8 OXT  OXT  O 0 1 N Y N Y N Y -3.525 11.352 3.153  3.917  0.726  1.884  OXT  HM8 18 
HM8 H    HN1  H 0 1 N N N Y Y N -2.717 11.737 -3.431 -0.619 3.292  -1.655 HN1  HM8 19 
HM8 H2   HN2  H 0 1 N Y N Y Y N -1.328 11.074 -2.887 -1.494 1.929  -2.033 HN2  HM8 20 
HM8 HA   HAA  H 0 1 N N N Y N N -3.879 9.754  -3.156 -0.784 2.844  0.679  HAA  HM8 21 
HM8 HAV  HAV  H 0 1 N N N N N N -1.192 8.826  -2.003 -1.864 0.784  1.440  HAV  HM8 22 
HM8 HAW1 HAW1 H 0 0 N N N N N N -2.211 6.665  -1.501 -4.209 1.317  0.835  HAW1 HM8 23 
HM8 HAW2 HAW2 H 0 0 N N N N N N -2.941 7.988  -0.530 -3.282 2.800  1.168  HAW2 HM8 24 
HM8 HAW3 HAW3 H 0 0 N N N N N N -3.827 7.315  -1.940 -3.632 2.327  -0.512 HAW3 HM8 25 
HM8 HBX  HBX  H 0 1 N N N N N N -0.835 6.166  -5.627 -4.486 -1.911 1.040  HBX  HM8 26 
HM8 HBD  HBD  H 0 1 N N N N N N -6.316 10.062 0.692  1.821  -1.368 -2.573 HBD  HM8 27 
HM8 HXT  HXT  H 0 1 N Y N Y N Y -3.049 11.666 3.913  4.791  0.473  2.210  HXT  HM8 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HM8 N   CA   SING N N 1  
HM8 CA  CAV  SING N N 2  
HM8 CA  CAZ  SING N N 3  
HM8 CAV CAW  SING N N 4  
HM8 CAV OBW  SING N N 5  
HM8 OBW SBV  SING N N 6  
HM8 SBV OBZ  DOUB N N 7  
HM8 SBV OBY  DOUB N N 8  
HM8 SBV OBX  SING N N 9  
HM8 CAZ NBA  DOUB Y N 10 
HM8 CAZ OBB  SING Y N 11 
HM8 NBA CAB  SING Y N 12 
HM8 OBB CBC  SING Y N 13 
HM8 CBC OBD  SING N N 14 
HM8 CBC CAB  DOUB Y N 15 
HM8 CAB C    SING N N 16 
HM8 C   SBG  DOUB N N 17 
HM8 C   OXT  SING N N 18 
HM8 N   H    SING N N 19 
HM8 N   H2   SING N N 20 
HM8 CA  HA   SING N N 21 
HM8 CAV HAV  SING N N 22 
HM8 CAW HAW1 SING N N 23 
HM8 CAW HAW2 SING N N 24 
HM8 CAW HAW3 SING N N 25 
HM8 OBX HBX  SING N N 26 
HM8 OBD HBD  SING N N 27 
HM8 OXT HXT  SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HM8 SMILES           ACDLabs              12.01 "S=C(O)c1nc(oc1O)C(N)C(OS(=O)(=O)O)C"                                                                                      
HM8 SMILES_CANONICAL CACTVS               3.370 "C[C@@H](O[S](O)(=O)=O)[C@H](N)c1oc(O)c(n1)C(O)=S"                                                                         
HM8 SMILES           CACTVS               3.370 "C[CH](O[S](O)(=O)=O)[CH](N)c1oc(O)c(n1)C(O)=S"                                                                            
HM8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C[C@H]([C@@H](c1nc(c(o1)O)C(=S)O)N)OS(=O)(=O)O"                                                                           
HM8 SMILES           "OpenEye OEToolkits" 1.7.0 "CC(C(c1nc(c(o1)O)C(=S)O)N)OS(=O)(=O)O"                                                                                    
HM8 InChI            InChI                1.03  "InChI=1S/C7H10N2O7S2/c1-2(16-18(12,13)14)3(8)5-9-4(7(11)17)6(10)15-5/h2-3,10H,8H2,1H3,(H,11,17)(H,12,13,14)/t2-,3+/m1/s1" 
HM8 InChIKey         InChI                1.03  ARRKNNQNBGDPEN-GBXIJSLDSA-N                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
HM8 "SYSTEMATIC NAME" ACDLabs              12.01 "2-[(1S,2R)-1-amino-2-(sulfooxy)propyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid" 
HM8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "2-[(1S,2R)-1-azanyl-2-sulfooxy-propyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HM8 "Create component"     2011-04-18 EBI  
HM8 "Modify linking type"  2011-04-18 EBI  
HM8 "Modify aromatic_flag" 2011-06-04 RCSB 
HM8 "Modify descriptor"    2011-06-04 RCSB 
HM8 "Modify backbone"      2023-11-03 PDBE 
HM8 "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            HM8 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
