data_DS8
# 
_chem_comp.id                                    DS8 
_chem_comp.name                                  "(2~{S},3~{S},4~{R},5~{S},6~{S})-2-[[(2~{S},4~{R},6~{R})-2-(hydroxymethyl)-6-oxidanyl-oxan-4-yl]methyl]-6-methyl-oxane-3,4,5-triol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H24 O7" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-01-29 
_chem_comp.pdbx_modified_date                    2019-01-25 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        292.325 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DS8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6FHY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DS8 C1  C1  C 0 1 N N S -28.285 42.245 48.505 -1.245 -0.395 -0.347 C1  DS8 1  
DS8 C2  C2  C 0 1 N N S -29.707 42.433 49.035 -2.410 -1.077 -1.070 C2  DS8 2  
DS8 C3  C3  C 0 1 N N R -30.754 42.662 47.964 -3.702 -0.306 -0.780 C3  DS8 3  
DS8 C4  C4  C 0 1 N N S -30.682 41.475 46.990 -3.916 -0.243 0.736  C4  DS8 4  
DS8 C5  C5  C 0 1 N N S -29.227 41.343 46.449 -2.693 0.407  1.389  C5  DS8 5  
DS8 C6  C6  C 0 1 N N N -29.059 40.138 45.499 -2.544 1.842  0.880  C6  DS8 6  
DS8 C7  C7  C 0 1 N N N -27.680 43.456 47.775 0.039  -1.193 -0.583 C7  DS8 7  
DS8 C8  C8  C 0 1 N N R -25.332 46.410 48.325 2.666  1.583  -0.129 C8  DS8 8  
DS8 O2  O1  O 0 1 N N N -29.717 43.578 49.796 -2.540 -2.421 -0.603 O2  DS8 9  
DS8 O3  O2  O 0 1 N N N -32.072 42.777 48.536 -3.596 1.019  -1.304 O3  DS8 10 
DS8 C9  C9  C 0 1 N N N -26.500 45.607 47.736 1.432  0.881  -0.701 C9  DS8 11 
DS8 O4  O3  O 0 1 N N N -31.128 40.281 47.660 -5.079 0.536  1.021  O4  DS8 12 
DS8 C10 C10 C 0 1 N N R -26.586 44.241 48.441 1.224  -0.447 0.034  C10 DS8 13 
DS8 C11 C11 C 0 1 N N N -25.217 43.526 48.385 2.491  -1.297 -0.101 C11 DS8 14 
DS8 C12 C12 C 0 1 N N S -24.125 44.463 48.907 3.684  -0.510 0.447  C12 DS8 15 
DS8 C13 C13 C 0 1 N N N -22.746 43.802 48.848 4.964  -1.328 0.262  C13 DS8 16 
DS8 O5  O4  O 0 1 N N N -28.301 41.195 47.536 -1.522 -0.341 1.054  O5  DS8 17 
DS8 O8  O5  O 0 1 N N N -25.203 47.670 47.668 2.899  2.797  -0.847 O8  DS8 18 
DS8 O12 O6  O 0 1 N N N -24.161 45.653 48.107 3.803  0.727  -0.258 O12 DS8 19 
DS8 O13 O7  O 0 1 N N N -21.674 44.628 49.390 6.059  -0.647 0.877  O13 DS8 20 
DS8 H1  H1  H 0 1 N N N -27.627 41.976 49.344 -1.120 0.617  -0.732 H1  DS8 21 
DS8 H2  H2  H 0 1 N N N -29.987 41.553 49.633 -2.220 -1.081 -2.143 H2  DS8 22 
DS8 H3  H3  H 0 1 N N N -30.504 43.581 47.414 -4.543 -0.817 -1.247 H3  DS8 23 
DS8 H4  H4  H 0 1 N N N -31.344 41.688 46.138 -4.047 -1.251 1.128  H4  DS8 24 
DS8 H5  H5  H 0 1 N N N -28.990 42.258 45.886 -2.821 0.416  2.472  H5  DS8 25 
DS8 H6  H6  H 0 1 N N N -28.018 40.090 45.147 -3.494 2.365  0.987  H6  DS8 26 
DS8 H7  H7  H 0 1 N N N -29.307 39.211 46.036 -1.779 2.356  1.462  H7  DS8 27 
DS8 H8  H8  H 0 1 N N N -29.733 40.254 44.637 -2.253 1.827  -0.170 H8  DS8 28 
DS8 H9  H9  H 0 1 N N N -28.504 44.157 47.578 -0.053 -2.175 -0.119 H9  DS8 29 
DS8 H10 H10 H 0 1 N N N -27.276 43.087 46.821 0.202  -1.311 -1.654 H10 DS8 30 
DS8 H11 H11 H 0 1 N N N -25.506 46.555 49.402 2.500  1.811  0.924  H11 DS8 31 
DS8 H12 H12 H 0 1 N N N -29.077 43.501 50.493 -3.261 -2.914 -1.020 H12 DS8 32 
DS8 H13 H13 H 0 1 N N N -32.095 43.515 49.134 -4.380 1.564  -1.155 H13 DS8 33 
DS8 H14 H14 H 0 1 N N N -27.439 46.159 47.889 0.555  1.515  -0.563 H14 DS8 34 
DS8 H15 H15 H 0 1 N N N -26.335 45.455 46.659 1.581  0.690  -1.763 H15 DS8 35 
DS8 H16 H16 H 0 1 N N N -32.016 40.406 47.972 -5.275 0.619  1.965  H16 DS8 36 
DS8 H17 H17 H 0 1 N N N -26.852 44.406 49.496 1.024  -0.253 1.088  H17 DS8 37 
DS8 H18 H18 H 0 1 N N N -25.251 42.621 49.009 2.372  -2.220 0.465  H18 DS8 38 
DS8 H19 H19 H 0 1 N N N -24.993 43.246 47.345 2.661  -1.532 -1.151 H19 DS8 39 
DS8 H20 H20 H 0 1 N N N -24.349 44.711 49.955 3.532  -0.310 1.508  H20 DS8 40 
DS8 H21 H21 H 0 1 N N N -22.786 42.865 49.422 4.839  -2.307 0.724  H21 DS8 41 
DS8 H22 H22 H 0 1 N N N -22.513 43.578 47.796 5.164  -1.452 -0.803 H22 DS8 42 
DS8 H23 H23 H 0 1 N N N -24.476 48.152 48.046 3.668  3.295  -0.538 H23 DS8 43 
DS8 H24 H24 H 0 1 N N N -20.849 44.161 49.323 6.904  -1.109 0.798  H24 DS8 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DS8 C6  C5  SING N N 1  
DS8 C5  C4  SING N N 2  
DS8 C5  O5  SING N N 3  
DS8 C4  O4  SING N N 4  
DS8 C4  C3  SING N N 5  
DS8 O5  C1  SING N N 6  
DS8 O8  C8  SING N N 7  
DS8 C9  C8  SING N N 8  
DS8 C9  C10 SING N N 9  
DS8 C7  C10 SING N N 10 
DS8 C7  C1  SING N N 11 
DS8 C3  O3  SING N N 12 
DS8 C3  C2  SING N N 13 
DS8 O12 C8  SING N N 14 
DS8 O12 C12 SING N N 15 
DS8 C11 C10 SING N N 16 
DS8 C11 C12 SING N N 17 
DS8 C1  C2  SING N N 18 
DS8 C13 C12 SING N N 19 
DS8 C13 O13 SING N N 20 
DS8 C2  O2  SING N N 21 
DS8 C1  H1  SING N N 22 
DS8 C2  H2  SING N N 23 
DS8 C3  H3  SING N N 24 
DS8 C4  H4  SING N N 25 
DS8 C5  H5  SING N N 26 
DS8 C6  H6  SING N N 27 
DS8 C6  H7  SING N N 28 
DS8 C6  H8  SING N N 29 
DS8 C7  H9  SING N N 30 
DS8 C7  H10 SING N N 31 
DS8 C8  H11 SING N N 32 
DS8 O2  H12 SING N N 33 
DS8 O3  H13 SING N N 34 
DS8 C9  H14 SING N N 35 
DS8 C9  H15 SING N N 36 
DS8 O4  H16 SING N N 37 
DS8 C10 H17 SING N N 38 
DS8 C11 H18 SING N N 39 
DS8 C11 H19 SING N N 40 
DS8 C12 H20 SING N N 41 
DS8 C13 H21 SING N N 42 
DS8 C13 H22 SING N N 43 
DS8 O8  H23 SING N N 44 
DS8 O13 H24 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DS8 InChI            InChI                1.03  "InChI=1S/C13H24O7/c1-6-11(16)13(18)12(17)9(19-6)3-7-2-8(5-14)20-10(15)4-7/h6-18H,2-5H2,1H3/t6-,7+,8-,9-,10+,11+,12+,13+/m0/s1" 
DS8 InChIKey         InChI                1.03  ROOQANRWEBNDFF-VBFQFBHJSA-N                                                                                                     
DS8 SMILES_CANONICAL CACTVS               3.385 "C[C@@H]1O[C@@H](C[C@@H]2C[C@H](O)O[C@H](CO)C2)[C@@H](O)[C@H](O)[C@@H]1O"                                                       
DS8 SMILES           CACTVS               3.385 "C[CH]1O[CH](C[CH]2C[CH](O)O[CH](CO)C2)[CH](O)[CH](O)[CH]1O"                                                                    
DS8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)C[C@H]2C[C@H](O[C@H](C2)O)CO)O)O)O"                                                        
DS8 SMILES           "OpenEye OEToolkits" 2.0.6 "CC1C(C(C(C(O1)CC2CC(OC(C2)O)CO)O)O)O"                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DS8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S},3~{S},4~{R},5~{S},6~{S})-2-[[(2~{S},4~{R},6~{R})-2-(hydroxymethyl)-6-oxidanyl-oxan-4-yl]methyl]-6-methyl-oxane-3,4,5-triol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DS8 "Create component" 2018-01-29 EBI  
DS8 "Initial release"  2019-01-30 RCSB 
# 
