data_D98
# 
_chem_comp.id                                    D98 
_chem_comp.name                                  "2-(4'-CARBAMIMIDOYL-2'-HYDROXYBIPHENYL-4-YL)-1H-BENZIMIDAZOLE-5-CARBOXIMIDAMIDE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H18 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-02-02 
_chem_comp.pdbx_modified_date                    2014-09-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        370.407 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     D98 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4AGZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
D98 C1   C1   C 0 1 Y N N 7.091  17.265 15.235 5.802  -0.778 0.580  C1   D98 1  
D98 C2   C2   C 0 1 Y N N 7.092  18.077 14.122 4.422  -0.867 0.566  C2   D98 2  
D98 C3   C3   C 0 1 Y N N 8.157  18.869 13.715 3.666  0.125  -0.070 C3   D98 3  
D98 C4   C4   C 0 1 Y N N 9.351  18.870 14.410 4.306  1.200  -0.688 C4   D98 4  
D98 C5   C5   C 0 1 Y N N 9.344  18.019 15.561 5.679  1.287  -0.672 C5   D98 5  
D98 C6   C6   C 0 1 Y N N 8.240  17.206 16.011 6.437  0.299  -0.039 C6   D98 6  
D98 C7   C7   C 0 1 Y N N 8.049  19.713 12.578 2.188  0.033  -0.088 C7   D98 7  
D98 C8   C8   C 0 1 Y N N 9.179  19.936 11.859 1.416  1.131  0.294  C8   D98 8  
D98 C9   C9   C 0 1 Y N N 9.252  20.782 10.764 0.042  1.046  0.277  C9   D98 9  
D98 C10  C10  C 0 1 Y N N 8.135  21.405 10.352 -0.580 -0.140 -0.122 C10  D98 10 
D98 C11  C11  C 0 1 Y N N 6.949  21.227 11.025 0.194  -1.238 -0.504 C11  D98 11 
D98 C12  C12  C 0 1 Y N N 6.886  20.368 12.155 1.567  -1.151 -0.492 C12  D98 12 
D98 C13  C13  C 0 1 Y N N 8.334  22.224 9.177  -2.055 -0.232 -0.140 C13  D98 13 
D98 N14  N14  N 0 1 Y N N 7.511  23.089 8.579  -2.770 -1.339 -0.511 N14  D98 14 
D98 C15  C15  C 0 1 Y N N 8.122  23.653 7.500  -4.107 -1.022 -0.390 C15  D98 15 
D98 C16  C16  C 0 1 Y N N 9.431  23.149 7.423  -4.155 0.310  0.065  C16  D98 16 
D98 N17  N17  N 0 1 Y N N 9.483  22.286 8.470  -2.874 0.732  0.203  N17  D98 17 
D98 C18  C18  C 0 1 Y N N 10.283 23.560 6.344  -5.392 0.917  0.284  C18  D98 18 
D98 C19  C19  C 0 1 Y N N 7.654  24.581 6.610  -5.285 -1.723 -0.618 C19  D98 19 
D98 C20  C20  C 0 1 Y N N 8.494  24.969 5.613  -6.493 -1.124 -0.402 C20  D98 20 
D98 C21  C21  C 0 1 Y N N 9.761  24.517 5.455  -6.559 0.199  0.050  C21  D98 21 
D98 C22  C22  C 0 1 N N N 10.414 25.084 4.331  -7.875 0.835  0.280  C22  D98 22 
D98 N24  N24  N 0 1 N N N 11.251 24.307 3.664  -9.033 0.125  0.049  N24  D98 23 
D98 N23  N23  N 0 1 N N N 10.297 26.364 3.933  -7.939 2.066  0.701  N23  D98 24 
D98 C25  C25  C 0 1 N N N 8.228  16.368 17.167 7.913  0.395  -0.024 C25  D98 25 
D98 N26  N26  N 0 1 N N N 9.325  15.778 17.670 8.620  -0.526 0.567  N26  D98 26 
D98 N27  N27  N 0 1 N N N 7.093  16.195 17.886 8.541  1.459  -0.635 N27  D98 27 
D98 OAE  OAE  O 0 1 N N N 5.887  18.064 13.406 3.801  -1.915 1.167  OAE  D98 28 
D98 H1   H1   H 0 1 N N N 6.217  16.688 15.497 6.387  -1.539 1.074  H1   D98 29 
D98 HAE  HAE  H 0 1 N N N 5.958  18.642 12.656 3.584  -1.762 2.097  HAE  D98 30 
D98 H4   H4   H 0 1 N N N 10.208 19.457 14.113 3.722  1.965  -1.178 H4   D98 31 
D98 H5   H5   H 0 1 N N N 10.250 17.982 16.148 6.173  2.120  -1.151 H5   D98 32 
D98 H8   H8   H 0 1 N N N 10.079 19.421 12.160 1.896  2.048  0.603  H8   D98 33 
D98 H12  H12  H 0 1 N N N 5.954  20.222 12.680 2.165  -1.999 -0.791 H12  D98 34 
D98 H9   H9   H 0 1 N N N 10.190 20.938 10.251 -0.556 1.896  0.573  H9   D98 35 
D98 H11  H11  H 0 1 N N N 6.060  21.743 10.693 -0.286 -2.155 -0.812 H11  D98 36 
D98 H14  H14  H 0 1 N N N 6.580  23.293 8.880  -2.405 -2.188 -0.805 H14  D98 37 
D98 H19  H19  H 0 1 N N N 6.658  24.989 6.696  -5.245 -2.744 -0.968 H19  D98 38 
D98 H18  H18  H 0 1 N N N 11.276 23.154 6.221  -5.443 1.938  0.633  H18  D98 39 
D98 H20  H20  H 0 1 N N N 8.125  25.688 4.897  -7.404 -1.675 -0.582 H20  D98 40 
D98 H23  H23  H 0 1 N N N 10.885 26.568 3.150  -8.802 2.483  0.852  H23  D98 41 
D98 H241 H241 H 0 0 N N N 11.770 24.677 2.893  -8.986 -0.792 -0.265 H241 D98 42 
D98 H242 H242 H 0 0 N N N 11.365 23.350 3.930  -9.896 0.542  0.199  H242 D98 43 
D98 H26  H26  H 0 1 N N N 9.131  15.289 18.520 9.588  -0.464 0.577  H26  D98 44 
D98 H271 H271 H 0 0 N N N 7.112  15.657 18.729 8.015  2.145  -1.075 H271 D98 45 
D98 H272 H272 H 0 0 N N N 6.236  16.605 17.574 9.509  1.522  -0.625 H272 D98 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
D98 C1  C2   SING Y N 1  
D98 C1  C6   DOUB Y N 2  
D98 C2  C3   DOUB Y N 3  
D98 C2  OAE  SING N N 4  
D98 C3  C4   SING Y N 5  
D98 C3  C7   SING N N 6  
D98 C4  C5   DOUB Y N 7  
D98 C5  C6   SING Y N 8  
D98 C6  C25  SING N N 9  
D98 C7  C8   SING Y N 10 
D98 C7  C12  DOUB Y N 11 
D98 C8  C9   DOUB Y N 12 
D98 C9  C10  SING Y N 13 
D98 C10 C11  DOUB Y N 14 
D98 C10 C13  SING N N 15 
D98 C11 C12  SING Y N 16 
D98 C13 N14  SING Y N 17 
D98 C13 N17  DOUB Y N 18 
D98 N14 C15  SING Y N 19 
D98 C15 C16  SING Y N 20 
D98 C15 C19  DOUB Y N 21 
D98 C16 N17  SING Y N 22 
D98 C16 C18  DOUB Y N 23 
D98 C18 C21  SING Y N 24 
D98 C19 C20  SING Y N 25 
D98 C20 C21  DOUB Y N 26 
D98 C21 C22  SING N N 27 
D98 C22 N23  DOUB N N 28 
D98 C22 N24  SING N N 29 
D98 C25 N26  DOUB N N 30 
D98 C25 N27  SING N N 31 
D98 C1  H1   SING N N 32 
D98 OAE HAE  SING N N 33 
D98 C4  H4   SING N N 34 
D98 C5  H5   SING N N 35 
D98 C8  H8   SING N N 36 
D98 C12 H12  SING N N 37 
D98 C9  H9   SING N N 38 
D98 C11 H11  SING N N 39 
D98 N14 H14  SING N N 40 
D98 C19 H19  SING N N 41 
D98 C18 H18  SING N N 42 
D98 C20 H20  SING N N 43 
D98 N23 H23  SING N N 44 
D98 N24 H241 SING N N 45 
D98 N24 H242 SING N N 46 
D98 N26 H26  SING N N 47 
D98 N27 H271 SING N N 48 
D98 N27 H272 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
D98 SMILES           ACDLabs              12.01 "n2c1cc(ccc1nc2c4ccc(c3ccc(C(=[N@H])N)cc3O)cc4)C(=[N@H])N"                                                                                           
D98 InChI            InChI                1.03  "InChI=1S/C21H18N6O/c22-19(23)13-6-8-16-17(9-13)27-21(26-16)12-3-1-11(2-4-12)15-7-5-14(20(24)25)10-18(15)28/h1-10,28H,(H3,22,23)(H3,24,25)(H,26,27)" 
D98 InChIKey         InChI                1.03  VYJOWVQQJBILOA-UHFFFAOYSA-N                                                                                                                          
D98 SMILES_CANONICAL CACTVS               3.385 "NC(=N)c1ccc(c(O)c1)c2ccc(cc2)c3[nH]c4ccc(cc4n3)C(N)=N"                                                                                              
D98 SMILES           CACTVS               3.385 "NC(=N)c1ccc(c(O)c1)c2ccc(cc2)c3[nH]c4ccc(cc4n3)C(N)=N"                                                                                              
D98 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "[H]/N=C(/c1ccc2c(c1)nc([nH]2)c3ccc(cc3)c4ccc(cc4O)/C(=N/[H])/N)\N"                                                                                  
D98 SMILES           "OpenEye OEToolkits" 1.9.2 "c1cc(ccc1c2ccc(cc2O)C(=N)N)c3[nH]c4ccc(cc4n3)C(=N)N"                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
D98 "SYSTEMATIC NAME" ACDLabs              12.01 "2-(4'-carbamimidoyl-2'-hydroxybiphenyl-4-yl)-1H-benzimidazole-5-carboximidamide"    
D98 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[4-(4-carbamimidoyl-2-oxidanyl-phenyl)phenyl]-1H-benzimidazole-5-carboximidamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
D98 "Create component"  2012-02-02 EBI  
D98 "Initial release"   2013-01-11 RCSB 
D98 "Modify descriptor" 2014-09-05 RCSB 
# 
