data_Z97
# 
_chem_comp.id                                    Z97 
_chem_comp.name                                  "(E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H20 N3 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-12-05 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        361.288 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Z97 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3KOY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Z97 C    C    C 0 1 N N N 9.116  46.525 -7.679  6.935  -1.247 -0.111 C    Z97 1  
Z97 N    N    N 0 1 N N N 9.398  44.711 -6.056  5.162  -1.157 -1.771 N    Z97 2  
Z97 O    O    O 0 1 N N N 8.396  46.199 -8.647  7.111  -2.392 -0.454 O    Z97 3  
Z97 P    P    P 0 1 N N N 8.501  41.308 -16.721 -4.455 -2.404 0.042  P    Z97 4  
Z97 N1   N1   N 0 1 Y N N 7.962  46.096 -15.342 -3.169 3.007  -0.536 N1   Z97 5  
Z97 C2   C2   C 0 1 Y N N 8.600  46.862 -14.445 -2.001 3.588  -0.354 C2   Z97 6  
Z97 C3   C3   C 0 1 Y N N 9.414  46.277 -13.484 -0.892 2.849  0.031  C3   Z97 7  
Z97 O3   O3   O 0 1 N N N 10.063 47.049 -12.572 0.309  3.454  0.218  O3   Z97 8  
Z97 C4   C4   C 0 1 Y N N 9.558  44.897 -13.463 -1.033 1.465  0.223  C4   Z97 9  
Z97 C5   C5   C 0 1 Y N N 8.886  44.128 -14.403 -2.295 0.897  0.016  C5   Z97 10 
Z97 C6   C6   C 0 1 Y N N 8.087  44.779 -15.338 -3.342 1.710  -0.366 C6   Z97 11 
Z97 CA   CA   C 0 1 N N S 10.067 45.459 -7.131  5.710  -0.502 -0.576 CA   Z97 12 
Z97 CB   CB   C 0 1 N N N 10.458 44.497 -8.254  4.659  -0.504 0.535  CB   Z97 13 
Z97 CD   CD   C 0 1 N N N 11.660 44.347 -10.466 2.416  0.355  1.223  CD   Z97 14 
Z97 NE   NE   N 0 1 N N N 10.804 44.987 -11.475 1.275  1.179  0.818  NE   Z97 15 
Z97 CG   CG   C 0 1 N N N 11.545 45.106 -9.143  3.467  0.357  0.112  CG   Z97 16 
Z97 C2A  C2A  C 0 1 N N N 8.431  48.382 -14.481 -1.869 5.075  -0.565 C2A  Z97 17 
Z97 C4A  C4A  C 0 1 N N N 10.368 44.291 -12.509 0.117  0.635  0.632  C4A  Z97 18 
Z97 C5A  C5A  C 0 1 N N N 8.971  42.602 -14.475 -2.507 -0.583 0.208  C5A  Z97 19 
Z97 OP1  OP1  O 0 1 N N N 8.145  42.002 -17.984 -4.172 -2.950 1.388  OP1  Z97 20 
Z97 OP2  OP2  O 0 1 N N N 7.876  39.816 -16.654 -3.756 -3.333 -1.071 OP2  Z97 21 
Z97 OP3  OP3  O 0 1 N N N 10.100 41.101 -16.576 -6.046 -2.379 -0.203 OP3  Z97 22 
Z97 OP4  OP4  O 0 1 N N N 8.010  42.077 -15.395 -3.872 -0.907 -0.064 OP4  Z97 23 
Z97 OXT  OXT  O 0 1 N N N 9.123  47.634 -7.130  7.826  -0.641 0.688  OXT  Z97 24 
Z97 HN   HN   H 0 1 N N N 10.019 44.014 -5.698  4.903  -2.112 -1.572 HN   Z97 25 
Z97 HNA  HNA  H 0 1 N N N 9.143  45.340 -5.321  4.379  -0.639 -2.140 HNA  Z97 26 
Z97 HO3  HO3  H 0 1 N N N 10.573 46.495 -11.993 0.455  3.767  1.121  HO3  Z97 27 
Z97 H6   H6   H 0 1 N N N 7.557  44.196 -16.077 -4.319 1.278  -0.527 H6   Z97 28 
Z97 HA   HA   H 0 1 N N N 10.970 45.944 -6.733  5.981  0.526  -0.818 HA   Z97 29 
Z97 HB   HB   H 0 1 N N N 10.839 43.565 -7.810  4.323  -1.525 0.715  HB   Z97 30 
Z97 HBA  HBA  H 0 1 N N N 9.571  44.285 -8.868  5.094  -0.098 1.448  HBA  Z97 31 
Z97 HD   HD   H 0 1 N N N 11.338 43.305 -10.320 2.851  0.760  2.136  HD   Z97 32 
Z97 HDA  HDA  H 0 1 N N N 12.705 44.364 -10.808 2.080  -0.667 1.403  HDA  Z97 33 
Z97 HG   HG   H 0 1 N N N 11.289 46.155 -9.354  3.803  1.378  -0.068 HG   Z97 34 
Z97 HGA  HGA  H 0 1 N N N 12.509 45.054 -8.616  3.032  -0.049 -0.801 HGA  Z97 35 
Z97 H2A  H2A  H 0 1 N N N 7.755  48.657 -15.304 -2.072 5.594  0.372  H2A  Z97 36 
Z97 H2AA H2AA H 0 0 N N N 8.005  48.726 -13.527 -0.857 5.306  -0.897 H2AA Z97 37 
Z97 H2AB H2AB H 0 0 N N N 9.411  48.856 -14.638 -2.583 5.399  -1.322 H2AB Z97 38 
Z97 H4A  H4A  H 0 1 N N N 10.641 43.251 -12.614 -0.009 -0.428 0.775  H4A  Z97 39 
Z97 H5A  H5A  H 0 1 N N N 9.979  42.316 -14.809 -1.860 -1.134 -0.475 H5A  Z97 40 
Z97 H5AA H5AA H 0 0 N N N 8.774  42.186 -13.476 -2.267 -0.854 1.236  H5AA Z97 41 
Z97 HOP2 HOP2 H 0 0 N N N 7.383  39.643 -17.447 -3.900 -3.034 -1.980 HOP2 Z97 42 
Z97 HOP3 HOP3 H 0 0 N N N 10.537 41.466 -17.337 -6.466 -3.249 -0.154 HOP3 Z97 43 
Z97 HOXT HOXT H 0 0 N N N 8.495  48.204 -7.558  8.596  -1.160 0.961  HOXT Z97 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Z97 O   C    DOUB N N 1  
Z97 C   CA   SING N N 2  
Z97 C   OXT  SING N N 3  
Z97 CA  N    SING N N 4  
Z97 N   HN   SING N N 5  
Z97 N   HNA  SING N N 6  
Z97 OP1 P    DOUB N N 7  
Z97 P   OP2  SING N N 8  
Z97 P   OP3  SING N N 9  
Z97 P   OP4  SING N N 10 
Z97 N1  C6   DOUB Y N 11 
Z97 N1  C2   SING Y N 12 
Z97 C2A C2   SING N N 13 
Z97 C2  C3   DOUB Y N 14 
Z97 C3  C4   SING Y N 15 
Z97 C3  O3   SING N N 16 
Z97 O3  HO3  SING N N 17 
Z97 C5  C4   DOUB Y N 18 
Z97 C4  C4A  SING N N 19 
Z97 C6  C5   SING Y N 20 
Z97 C5A C5   SING N N 21 
Z97 C6  H6   SING N N 22 
Z97 CB  CA   SING N N 23 
Z97 CA  HA   SING N N 24 
Z97 CG  CB   SING N N 25 
Z97 CB  HB   SING N N 26 
Z97 CB  HBA  SING N N 27 
Z97 NE  CD   SING N N 28 
Z97 CD  CG   SING N N 29 
Z97 CD  HD   SING N N 30 
Z97 CD  HDA  SING N N 31 
Z97 C4A NE   DOUB N N 32 
Z97 CG  HG   SING N N 33 
Z97 CG  HGA  SING N N 34 
Z97 C2A H2A  SING N N 35 
Z97 C2A H2AA SING N N 36 
Z97 C2A H2AB SING N N 37 
Z97 C4A H4A  SING N N 38 
Z97 OP4 C5A  SING N N 39 
Z97 C5A H5A  SING N N 40 
Z97 C5A H5AA SING N N 41 
Z97 OP2 HOP2 SING N N 42 
Z97 OP3 HOP3 SING N N 43 
Z97 OXT HOXT SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Z97 SMILES_CANONICAL CACTVS               3.352 "Cc1ncc(CO[P](O)(O)=O)c(C=NCCC[C@H](N)C(O)=O)c1O"                                                                                                            
Z97 SMILES           CACTVS               3.352 "Cc1ncc(CO[P](O)(O)=O)c(C=NCCC[CH](N)C(O)=O)c1O"                                                                                                             
Z97 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/CCC[C@@H](C(=O)O)N)O"                                                                                                         
Z97 SMILES           "OpenEye OEToolkits" 1.7.0 "Cc1c(c(c(cn1)COP(=O)(O)O)C=NCCCC(C(=O)O)N)O"                                                                                                                
Z97 InChI            InChI                1.03  "InChI=1S/C13H20N3O7P/c1-8-12(17)10(6-15-4-2-3-11(14)13(18)19)9(5-16-8)7-23-24(20,21)22/h5-6,11,17H,2-4,7,14H2,1H3,(H,18,19)(H2,20,21,22)/b15-6+/t11-/m0/s1" 
Z97 InChIKey         InChI                1.03  RMKYDMCVWSLEGI-DMSFABOWSA-N                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Z97 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S)-2-azanyl-5-[(E)-[3-hydroxy-2-methyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]pentanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Z97 "Create component"     2009-12-05 RCSB 
Z97 "Modify aromatic_flag" 2011-06-04 RCSB 
Z97 "Modify descriptor"    2011-06-04 RCSB 
# 
