data_WR7
#

_chem_comp.id                                   WR7
_chem_comp.name                                 "2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl [(1R)-2,2,2-trichloro-1-(pyrimidin-2-ylamino)ethyl]carbamate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H14 Cl3 N7 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        apcin
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2013-10-22
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       438.654
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    WR7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4N14
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
WR7  C1    C1    C    0  1  Y  N  N  -30.917   -4.909  74.258   3.361   4.344   0.096  C1    WR7   1  
WR7  N1    N1    N    0  1  Y  N  N  -29.823   -5.484  73.716   3.435   3.149   0.658  N1    WR7   2  
WR7  O1    O1    O    0  1  N  N  N  -24.926   -8.526  75.967  -1.085  -0.856   0.638  O1    WR7   3  
WR7  CL1   CL1   CL   0  0  N  N  N  -27.243  -11.131  73.140   3.820  -1.854   1.849  CL1   WR7   4  
WR7  C2    C2    C    0  1  Y  N  N  -29.615   -6.814  73.813   2.943   2.082   0.046  C2    WR7   5  
WR7  N2    N2    N    0  1  Y  N  N  -30.477   -7.602  74.438   2.362   2.169  -1.141  N2    WR7   6  
WR7  O2    O2    O    0  1  N  N  N  -26.878   -9.680  75.915   0.045   0.050  -1.043  O2    WR7   7  
WR7  CL2   CL2   CL   0  0  N  N  N  -29.566   -9.883  72.137   5.052  -1.006  -0.687  CL2   WR7   8  
WR7  C3    C3    C    0  1  Y  N  N  -31.593   -7.076  74.999   2.256   3.334  -1.758  C3    WR7   9  
WR7  N3    N3    N    0  1  N  N  N  -28.408   -7.381  73.203   3.037   0.846   0.663  N3    WR7  10  
WR7  O3    O3    O    0  1  N  N  N  -27.773   -5.356  75.853  -4.208   1.575   1.694  O3    WR7  11  
WR7  CL3   CL3   CL   0  0  N  N  N  -27.004   -9.081  71.216   2.846  -2.956  -0.702  CL3   WR7  12  
WR7  C4    C4    C    0  1  Y  N  N  -31.846   -5.700  74.924   2.760   4.471  -1.146  C4    WR7  13  
WR7  N4    N4    N    0  1  N  N  N  -26.446   -8.352  74.059   1.245  -0.738   0.651  N4    WR7  14  
WR7  O4    O4    O   -1  1  N  N  N  -25.792   -5.336  76.599  -5.949   2.531   0.984  O4    WR7  15  
WR7  C5    C5    C    0  1  N  N  R  -27.835   -8.614  73.679   2.499  -0.345   0.002  C5    WR7  16  
WR7  N5    N5    N    0  1  Y  N  N  -26.449   -7.629  78.321  -4.752  -0.747   0.033  N5    WR7  17  
WR7  C6    C6    C    0  1  N  N  N  -27.911   -9.635  72.591   3.509  -1.489   0.111  C6    WR7  18  
WR7  N6    N6    N    0  1  Y  N  N  -28.540   -8.063  79.016  -6.452  -0.950  -1.280  N6    WR7  19  
WR7  C7    C7    C    0  1  N  N  N  -26.112   -8.922  75.352   0.067  -0.495   0.043  C7    WR7  20  
WR7  N7    N7    N    1  1  N  N  N  -26.937   -5.770  76.643  -5.200   1.571   0.987  N7    WR7  21  
WR7  C8    C8    C    0  1  N  N  N  -24.649   -8.860  77.296  -2.316  -0.563  -0.074  C8    WR7  22  
WR7  C9    C9    C    0  1  N  N  N  -25.009   -7.699  78.189  -3.510  -1.043   0.752  C9    WR7  23  
WR7  C10   C10   C    0  1  Y  N  N  -28.622   -7.025  78.052  -6.549   0.252  -0.693  C10   WR7  24  
WR7  C11   C11   C    0  1  Y  N  N  -27.240   -8.419  79.171  -5.380  -1.555  -0.848  C11   WR7  25  
WR7  C12   C12   C    0  1  Y  N  N  -27.310   -6.762  77.625  -5.496   0.398   0.134  C12   WR7  26  
WR7  C13   C13   C    0  1  N  N  N  -26.742   -9.501  80.117  -4.918  -2.928  -1.264  C13   WR7  27  
WR7  H10   H10   H    0  1  N  N  N  -29.521   -6.532  77.712  -7.333   0.977  -0.856  H10   WR7  28  
WR7  H1    H1    H    0  1  N  N  N  -31.069   -3.843  74.175   3.761   5.211   0.601  H1    WR7  29  
WR7  H3    H3    H    0  1  N  N  N  -32.293   -7.723  75.508   1.782   3.399  -2.726  H3    WR7  30  
WR7  H13   H13   H    0  1  N  N  N  -27.596   -9.944  80.650  -5.349  -3.674  -0.597  H13   WR7  31  
WR7  HN3   HN3   H    0  1  N  N  N  -28.620   -7.523  72.236   3.461   0.769   1.533  HN3   WR7  32  
WR7  H13A  H13A  H    0  0  N  N  N  -26.224  -10.282  79.541  -5.239  -3.125  -2.287  H13A  WR7  33  
WR7  H13B  H13B  H    0  0  N  N  N  -26.045   -9.059  80.844  -3.830  -2.977  -1.210  H13B  WR7  34  
WR7  H4    H4    H    0  1  N  N  N  -32.731   -5.269  75.368   2.686   5.435  -1.628  H4    WR7  35  
WR7  HN4   HN4   H    0  1  N  N  N  -25.801   -7.839  73.493   1.263  -1.174   1.517  HN4   WR7  36  
WR7  H5    H5    H    0  1  N  N  N  -28.395   -8.975  74.554   2.311  -0.125  -1.048  H5    WR7  37  
WR7  H8    H8    H    0  1  N  N  N  -25.240   -9.742  77.584  -2.394   0.512  -0.237  H8    WR7  38  
WR7  H8A   H8A   H    0  1  N  N  N  -23.578   -9.086  77.402  -2.310  -1.076  -1.036  H8A   WR7  39  
WR7  H9    H9    H    0  1  N  N  N  -24.634   -6.764  77.746  -3.516  -0.529   1.714  H9    WR7  40  
WR7  H9A   H9A   H    0  1  N  N  N  -24.555   -7.843  79.181  -3.432  -2.118   0.915  H9A   WR7  41  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
WR7  C1   N1    DOUB  Y  N   1  
WR7  C1   C4    SING  Y  N   2  
WR7  C1   H1    SING  N  N   3  
WR7  N1   C2    SING  Y  N   4  
WR7  O1   C7    SING  N  N   5  
WR7  O1   C8    SING  N  N   6  
WR7  CL1  C6    SING  N  N   7  
WR7  C2   N2    DOUB  Y  N   8  
WR7  C2   N3    SING  N  N   9  
WR7  N2   C3    SING  Y  N  10  
WR7  O2   C7    DOUB  N  N  11  
WR7  CL2  C6    SING  N  N  12  
WR7  C3   C4    DOUB  Y  N  13  
WR7  C3   H3    SING  N  N  14  
WR7  N3   C5    SING  N  N  15  
WR7  N3   HN3   SING  N  N  16  
WR7  O3   N7    DOUB  N  N  17  
WR7  CL3  C6    SING  N  N  18  
WR7  C4   H4    SING  N  N  19  
WR7  N4   C5    SING  N  N  20  
WR7  N4   C7    SING  N  N  21  
WR7  N4   HN4   SING  N  N  22  
WR7  O4   N7    SING  N  N  23  
WR7  C5   C6    SING  N  N  24  
WR7  C5   H5    SING  N  N  25  
WR7  N5   C9    SING  N  N  26  
WR7  N5   C11   SING  Y  N  27  
WR7  N5   C12   SING  Y  N  28  
WR7  N6   C10   SING  Y  N  29  
WR7  N6   C11   DOUB  Y  N  30  
WR7  N7   C12   SING  N  N  31  
WR7  C8   C9    SING  N  N  32  
WR7  C8   H8    SING  N  N  33  
WR7  C8   H8A   SING  N  N  34  
WR7  C9   H9    SING  N  N  35  
WR7  C9   H9A   SING  N  N  36  
WR7  C10  C12   DOUB  Y  N  37  
WR7  C10  H10   SING  N  N  38  
WR7  C11  C13   SING  N  N  39  
WR7  C13  H13   SING  N  N  40  
WR7  C13  H13A  SING  N  N  41  
WR7  C13  H13B  SING  N  N  42  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
WR7  SMILES            ACDLabs               12.01  "ClC(Cl)(Cl)C(Nc1ncccn1)NC(=O)OCCn2c(cnc2C)[N+]([O-])=O"  
WR7  InChI             InChI                 1.03   "InChI=1S/C13H14Cl3N7O4/c1-8-19-7-9(23(25)26)22(8)5-6-27-12(24)21-10(13(14,15)16)20-11-17-3-2-4-18-11/h2-4,7,10H,5-6H2,1H3,(H,21,24)(H,17,18,20)/t10-/m1/s1"  
WR7  InChIKey          InChI                 1.03   ZEXHXVOGJFGTRX-SNVBAGLBSA-N  
WR7  SMILES_CANONICAL  CACTVS                3.385  "Cc1ncc(n1CCOC(=O)N[C@@H](Nc2ncccn2)C(Cl)(Cl)Cl)[N+]([O-])=O"  
WR7  SMILES            CACTVS                3.385  "Cc1ncc(n1CCOC(=O)N[CH](Nc2ncccn2)C(Cl)(Cl)Cl)[N+]([O-])=O"  
WR7  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "Cc1ncc(n1CCOC(=O)N[C@H](C(Cl)(Cl)Cl)Nc2ncccn2)[N+](=O)[O-]"  
WR7  SMILES            "OpenEye OEToolkits"  1.7.6  "Cc1ncc(n1CCOC(=O)NC(C(Cl)(Cl)Cl)Nc2ncccn2)[N+](=O)[O-]"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
WR7  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl [(1R)-2,2,2-trichloro-1-(pyrimidin-2-ylamino)ethyl]carbamate"  
WR7  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.6  "2-(2-methyl-5-nitro-imidazol-1-yl)ethyl N-[(1R)-2,2,2-tris(chloranyl)-1-(pyrimidin-2-ylamino)ethyl]carbamate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
WR7  "Create component"  2013-10-22  RCSB  
WR7  "Modify synonyms"   2014-08-04  RCSB  
WR7  "Initial release"   2014-08-20  RCSB  
WR7  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     WR7
_pdbx_chem_comp_synonyms.name        apcin
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
