data_SD7
# 
_chem_comp.id                                    SD7 
_chem_comp.name                                  "4-[(2~{S})-3-azanyl-2-methyl-propyl]-7-methoxy-1-benzothiophene-2-carboximidamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H19 N3 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-15 
_chem_comp.pdbx_modified_date                    2023-07-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        277.385 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SD7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BYZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SD7 C7  C1  C 0 1 Y N N 18.981 20.879 -8.568  -0.836 -1.240 0.685  C7  SD7 1  
SD7 N   N1  N 0 1 N N N 20.142 15.499 -6.075  -0.090 4.070  0.405  N   SD7 2  
SD7 C   C2  C 0 1 N N N 18.405 22.292 -3.695  3.322  -3.651 -0.468 C   SD7 3  
SD7 O   O1  O 0 1 N N N 18.801 21.080 -4.388  3.023  -2.255 -0.401 O   SD7 4  
SD7 C1  C3  C 0 1 Y N N 18.871 21.110 -5.761  1.757  -1.912 -0.045 C1  SD7 5  
SD7 C10 C4  C 0 1 N N N 19.764 23.039 -10.677 -2.558 0.559  -0.936 C10 SD7 6  
SD7 C11 C5  C 0 1 N N N 19.335 21.360 -12.441 -4.546 -0.431 0.209  C11 SD7 7  
SD7 C12 C6  C 0 1 Y N N 18.578 22.057 -7.939  -0.466 -2.546 0.596  C12 SD7 8  
SD7 C13 C7  C 0 1 Y N N 18.519 22.176 -6.558  0.829  -2.893 0.232  C13 SD7 9  
SD7 C2  C8  C 0 1 Y N N 19.298 19.915 -6.361  1.395  -0.559 0.040  C2  SD7 10 
SD7 C3  C9  C 0 1 Y N N 19.995 17.630 -7.083  0.966  1.923  0.131  C3  SD7 11 
SD7 C4  C10 C 0 1 N N N 20.422 16.241 -7.153  0.988  3.397  0.106  C4  SD7 12 
SD7 C5  C11 C 0 1 Y N N 19.788 18.465 -8.143  -0.101 1.184  0.444  C5  SD7 13 
SD7 C6  C12 C 0 1 Y N N 19.373 19.789 -7.765  0.093  -0.208 0.407  C6  SD7 14 
SD7 C8  C13 C 0 1 N N N 18.819 20.752 -10.066 -2.248 -0.890 1.076  C8  SD7 15 
SD7 C9  C14 C 0 1 N N S 19.764 21.548 -10.995 -3.086 -0.664 -0.184 C9  SD7 16 
SD7 N1  N2  N 0 1 N N N 20.999 15.710 -8.149  2.147  4.064  -0.233 N1  SD7 17 
SD7 N2  N3  N 0 1 N N N 18.122 20.544 -12.554 -5.370 -0.334 -1.004 N2  SD7 18 
SD7 S   S1  S 0 1 Y N N 19.705 18.422 -5.558  2.340  0.898  -0.249 S   SD7 19 
SD7 H3  H1  H 0 1 N N N 19.670 16.027 -5.369  -0.904 3.601  0.643  H3  SD7 20 
SD7 H   H2  H 0 1 N N N 18.397 22.109 -2.610  2.671  -4.127 -1.202 H   SD7 21 
SD7 H1  H3  H 0 1 N N N 19.119 23.096 -3.925  4.362  -3.786 -0.763 H1  SD7 22 
SD7 H2  H4  H 0 1 N N N 17.399 22.590 -4.024  3.159  -4.105 0.510  H2  SD7 23 
SD7 H11 H5  H 0 1 N N N 20.073 23.192 -9.632  -1.518 0.393  -1.216 H11 SD7 24 
SD7 H10 H6  H 0 1 N N N 20.467 23.557 -11.346 -3.155 0.720  -1.834 H10 SD7 25 
SD7 H12 H7  H 0 1 N N N 18.752 23.445 -10.823 -2.625 1.437  -0.293 H12 SD7 26 
SD7 H14 H8  H 0 1 N N N 20.149 20.864 -12.991 -4.895 -1.263 0.820  H14 SD7 27 
SD7 H13 H9  H 0 1 N N N 19.141 22.348 -12.885 -4.625 0.495  0.777  H13 SD7 28 
SD7 H17 H10 H 0 1 N N N 18.302 22.905 -8.548  -1.186 -3.320 0.812  H17 SD7 29 
SD7 H18 H11 H 0 1 N N N 18.197 23.104 -6.109  1.109  -3.934 0.166  H18 SD7 30 
SD7 H6  H12 H 0 1 N N N 19.923 18.160 -9.170  -1.049 1.627  0.709  H6  SD7 31 
SD7 H8  H13 H 0 1 N N N 17.792 21.065 -10.306 -2.678 -1.706 1.657  H8  SD7 32 
SD7 H7  H14 H 0 1 N N N 18.945 19.688 -10.314 -2.243 0.020  1.676  H7  SD7 33 
SD7 H9  H15 H 0 1 N N N 20.785 21.159 -10.873 -3.018 -1.542 -0.827 H9  SD7 34 
SD7 H19 H16 H 0 1 N N N 21.243 14.740 -8.127  2.947  3.564  -0.455 H19 SD7 35 
SD7 H5  H17 H 0 1 N N N 21.210 16.261 -8.957  2.161  5.034  -0.249 H5  SD7 36 
SD7 H20 H18 H 0 1 N N N 17.875 20.445 -13.518 -6.339 -0.180 -0.771 H20 SD7 37 
SD7 H15 H19 H 0 1 N N N 18.290 19.641 -12.159 -5.026 0.389  -1.618 H15 SD7 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SD7 N2  C11 SING N N 1  
SD7 C11 C9  SING N N 2  
SD7 C9  C10 SING N N 3  
SD7 C9  C8  SING N N 4  
SD7 C8  C7  SING N N 5  
SD7 C7  C12 DOUB Y N 6  
SD7 C7  C6  SING Y N 7  
SD7 N1  C4  SING N N 8  
SD7 C5  C6  SING Y N 9  
SD7 C5  C3  DOUB Y N 10 
SD7 C12 C13 SING Y N 11 
SD7 C6  C2  DOUB Y N 12 
SD7 C4  C3  SING N N 13 
SD7 C4  N   DOUB N N 14 
SD7 C3  S   SING Y N 15 
SD7 C13 C1  DOUB Y N 16 
SD7 C2  C1  SING Y N 17 
SD7 C2  S   SING Y N 18 
SD7 C1  O   SING N N 19 
SD7 O   C   SING N N 20 
SD7 N   H3  SING N N 21 
SD7 C   H   SING N N 22 
SD7 C   H1  SING N N 23 
SD7 C   H2  SING N N 24 
SD7 C10 H11 SING N N 25 
SD7 C10 H10 SING N N 26 
SD7 C10 H12 SING N N 27 
SD7 C11 H14 SING N N 28 
SD7 C11 H13 SING N N 29 
SD7 C12 H17 SING N N 30 
SD7 C13 H18 SING N N 31 
SD7 C5  H6  SING N N 32 
SD7 C8  H8  SING N N 33 
SD7 C8  H7  SING N N 34 
SD7 C9  H9  SING N N 35 
SD7 N1  H19 SING N N 36 
SD7 N1  H5  SING N N 37 
SD7 N2  H20 SING N N 38 
SD7 N2  H15 SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SD7 InChI            InChI                1.06  "InChI=1S/C14H19N3OS/c1-8(7-15)5-9-3-4-11(18-2)13-10(9)6-12(19-13)14(16)17/h3-4,6,8H,5,7,15H2,1-2H3,(H3,16,17)/t8-/m0/s1" 
SD7 InChIKey         InChI                1.06  HWNLBEKYMLWJTF-QMMMGPOBSA-N                                                                                               
SD7 SMILES_CANONICAL CACTVS               3.385 "COc1ccc(C[C@H](C)CN)c2cc(sc12)C(N)=N"                                                                                    
SD7 SMILES           CACTVS               3.385 "COc1ccc(C[CH](C)CN)c2cc(sc12)C(N)=N"                                                                                     
SD7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\c1cc2c(ccc(c2s1)OC)C[C@H](C)CN)/N"                                                                              
SD7 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(Cc1ccc(c2c1cc(s2)C(=N)N)OC)CN"                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           SD7 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "4-[(2~{S})-3-azanyl-2-methyl-propyl]-7-methoxy-1-benzothiophene-2-carboximidamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SD7 "Create component" 2022-12-15 PDBE 
SD7 "Modify formula"   2023-05-15 PDBE 
SD7 "Initial release"  2023-08-02 RCSB 
# 
