data_D97
#

_chem_comp.id                                   D97
_chem_comp.name                                 "(1S,2S,3S,4R,5R)-4-(morpholin-4-yl)-2-[(quinolin-3-ylmethyl)amino]-6,8-dioxabicyclo[3.2.1]octan-3-ol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H25 N3 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-10-23
_chem_comp.pdbx_modified_date                   2020-04-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       371.430
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    D97
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5QBK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
D97  O3   O1   O  0  1  N  N  N  16.009  -15.818   -8.975  -0.096  -3.669   0.091  O3   D97   1  
D97  C4   C1   C  0  1  Y  N  N   7.252  -13.997   -3.728   3.817   0.679  -0.583  C4   D97   2  
D97  C5   C2   C  0  1  Y  N  N   6.642  -15.269   -3.787   4.739   0.308  -1.575  C5   D97   3  
D97  C6   C3   C  0  1  Y  N  N   7.597  -13.243   -4.859   2.552   1.198  -0.916  C6   D97   4  
D97  N1   N1   N  0  1  N  N  N   9.460  -12.129   -6.918  -0.627   0.991  -0.320  N1   D97   5  
D97  C7   C4   C  0  1  Y  N  N   8.252  -12.049   -4.740   1.704   1.532   0.102  C7   D97   6  
D97  C8   C5   C  0  1  Y  N  N   8.543  -11.611   -3.453   2.103   1.355   1.425  C8   D97   7  
D97  N2   N2   N  0  1  N  N  N  13.476  -15.093   -7.724  -1.792  -1.440  -0.115  N2   D97   8  
D97  C9   C6   C  0  1  N  N  N   8.650  -11.291   -5.976   0.340   2.092  -0.206  C9   D97   9  
D97  C10  C7   C  0  1  N  N  S  10.579  -12.873   -6.259  -1.971   1.500  -0.621  C10  D97  10  
D97  C11  C8   C  0  1  N  N  S  11.602  -11.860   -5.687  -2.702   1.834   0.691  C11  D97  11  
D97  C12  C9   C  0  1  N  N  N  12.083  -12.245   -4.303  -4.206   1.988   0.365  C12  D97  12  
D97  C13  C10  C  0  1  N  N  R  13.364  -13.193   -5.959  -3.666  -0.202   0.878  C13  D97  13  
D97  C14  C11  C  0  1  N  N  R  12.643  -14.387   -6.641  -3.050  -0.746  -0.420  C14  D97  14  
D97  C15  C12  C  0  1  N  N  S  11.341  -13.802   -7.294  -2.774   0.428  -1.366  C15  D97  15  
D97  O2   O2   O  0  1  N  N  N  10.517  -14.943   -7.497  -4.012   0.983  -1.813  O2   D97  16  
D97  C19  C13  C  0  1  N  N  N  14.263  -14.169   -8.608  -1.983  -2.431   0.953  C19  D97  17  
D97  C18  C14  C  0  1  N  N  N  15.049  -14.975   -9.614  -0.638  -3.087   1.280  C18  D97  18  
D97  C17  C15  C  0  1  N  N  N  15.813  -15.845   -7.564   0.103  -2.731  -0.970  C17  D97  19  
D97  C16  C16  C  0  1  N  N  N  14.384  -16.175   -7.211  -1.234  -2.072  -1.319  C16  D97  20  
D97  O    O3   O  0  1  N  N  N  13.123  -13.206   -4.561  -4.758   0.669   0.528  O    D97  21  
D97  O1   O4   O  0  1  N  N  N  12.825  -11.978   -6.438  -2.676   0.639   1.510  O1   D97  22  
D97  C    C17  C  0  1  Y  N  N   6.385  -15.968   -2.646   5.951  -0.196  -1.213  C    D97  23  
D97  N    N3   N  0  1  Y  N  N   8.231  -12.257   -2.345   3.283   0.872   1.731  N    D97  24  
D97  C3   C18  C  0  1  Y  N  N   7.586  -13.461   -2.468   4.159   0.525   0.783  C3   D97  25  
D97  C2   C19  C  0  1  Y  N  N   7.290  -14.208   -1.306   5.420   0.001   1.117  C2   D97  26  
D97  C1   C20  C  0  1  Y  N  N   6.706  -15.438   -1.407   6.289  -0.348   0.130  C1   D97  27  
D97  H1   H1   H  0  1  N  N  N   6.377  -15.692   -4.745   4.488   0.421  -2.620  H1   D97  28  
D97  H2   H2   H  0  1  N  N  N   7.341  -13.612   -5.841   2.259   1.329  -1.947  H2   D97  29  
D97  H3   H3   H  0  1  N  N  N   9.849  -11.530   -7.617  -0.632   0.426   0.516  H3   D97  30  
D97  H5   H5   H  0  1  N  N  N   9.064  -10.670   -3.352   1.423   1.623   2.220  H5   D97  31  
D97  H7   H7   H  0  1  N  N  N   9.246  -10.416   -5.678   0.376   2.642  -1.146  H7   D97  32  
D97  H8   H8   H  0  1  N  N  N   7.740  -10.955   -6.494   0.033   2.763   0.596  H8   D97  33  
D97  H9   H9   H  0  1  N  N  N  10.188  -13.497   -5.442  -1.895   2.397  -1.235  H9   D97  34  
D97  H10  H10  H  0  1  N  N  N  11.194  -10.839   -5.701  -2.287   2.710   1.189  H10  D97  35  
D97  H11  H11  H  0  1  N  N  N  12.481  -11.370   -3.768  -4.675   2.683   1.061  H11  D97  36  
D97  H12  H12  H  0  1  N  N  N  11.269  -12.695   -3.716  -4.339   2.332  -0.660  H12  D97  37  
D97  H13  H13  H  0  1  N  N  N  14.441  -13.256   -6.172  -3.993  -1.002   1.543  H13  D97  38  
D97  H14  H14  H  0  1  N  N  N  12.356  -15.119   -5.872  -3.746  -1.441  -0.891  H14  D97  39  
D97  H15  H15  H  0  1  N  N  N  11.571  -13.255   -8.220  -2.201   0.076  -2.224  H15  D97  40  
D97  H16  H16  H  0  1  N  N  N   9.697  -14.675   -7.894  -3.913   1.732  -2.416  H16  D97  41  
D97  H17  H17  H  0  1  N  N  N  14.956  -13.576   -7.993  -2.372  -1.937   1.843  H17  D97  42  
D97  H18  H18  H  0  1  N  N  N  13.574  -13.495   -9.138  -2.688  -3.193   0.621  H18  D97  43  
D97  H19  H19  H  0  1  N  N  N  15.574  -14.286  -10.292  -0.784  -3.863   2.031  H19  D97  44  
D97  H20  H20  H  0  1  N  N  N  14.353  -15.600  -10.193   0.051  -2.333   1.663  H20  D97  45  
D97  H21  H21  H  0  1  N  N  N  16.475  -16.607   -7.126   0.813  -1.967  -0.653  H21  D97  46  
D97  H22  H22  H  0  1  N  N  N  16.065  -14.858   -7.149   0.493  -3.250  -1.846  H22  D97  47  
D97  H23  H23  H  0  1  N  N  N  14.284  -16.249   -6.118  -1.927  -2.828  -1.688  H23  D97  48  
D97  H24  H24  H  0  1  N  N  N  14.106  -17.135   -7.670  -1.077  -1.316  -2.089  H24  D97  49  
D97  H25  H25  H  0  1  N  N  N   5.927  -16.944   -2.708   6.660  -0.481  -1.977  H25  D97  50  
D97  H26  H26  H  0  1  N  N  N   7.527  -13.804   -0.333   5.699  -0.123   2.153  H26  D97  51  
D97  H27  H27  H  0  1  N  N  N   6.492  -16.003   -0.512   7.257  -0.750   0.391  H27  D97  52  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D97  C18  O3   SING  N  N   1  
D97  C18  C19  SING  N  N   2  
D97  O3   C17  SING  N  N   3  
D97  C19  N2   SING  N  N   4  
D97  N2   C16  SING  N  N   5  
D97  N2   C14  SING  N  N   6  
D97  C17  C16  SING  N  N   7  
D97  O2   C15  SING  N  N   8  
D97  C15  C14  SING  N  N   9  
D97  C15  C10  SING  N  N  10  
D97  N1   C10  SING  N  N  11  
D97  N1   C9   SING  N  N  12  
D97  C14  C13  SING  N  N  13  
D97  O1   C13  SING  N  N  14  
D97  O1   C11  SING  N  N  15  
D97  C10  C11  SING  N  N  16  
D97  C9   C7   SING  N  N  17  
D97  C13  O    SING  N  N  18  
D97  C11  C12  SING  N  N  19  
D97  C6   C7   DOUB  Y  N  20  
D97  C6   C4   SING  Y  N  21  
D97  C7   C8   SING  Y  N  22  
D97  O    C12  SING  N  N  23  
D97  C5   C4   DOUB  Y  N  24  
D97  C5   C    SING  Y  N  25  
D97  C4   C3   SING  Y  N  26  
D97  C8   N    DOUB  Y  N  27  
D97  C    C1   DOUB  Y  N  28  
D97  C3   N    SING  Y  N  29  
D97  C3   C2   DOUB  Y  N  30  
D97  C1   C2   SING  Y  N  31  
D97  C5   H1   SING  N  N  32  
D97  C6   H2   SING  N  N  33  
D97  N1   H3   SING  N  N  34  
D97  C8   H5   SING  N  N  35  
D97  C9   H7   SING  N  N  36  
D97  C9   H8   SING  N  N  37  
D97  C10  H9   SING  N  N  38  
D97  C11  H10  SING  N  N  39  
D97  C12  H11  SING  N  N  40  
D97  C12  H12  SING  N  N  41  
D97  C13  H13  SING  N  N  42  
D97  C14  H14  SING  N  N  43  
D97  C15  H15  SING  N  N  44  
D97  O2   H16  SING  N  N  45  
D97  C19  H17  SING  N  N  46  
D97  C19  H18  SING  N  N  47  
D97  C18  H19  SING  N  N  48  
D97  C18  H20  SING  N  N  49  
D97  C17  H21  SING  N  N  50  
D97  C17  H22  SING  N  N  51  
D97  C16  H23  SING  N  N  52  
D97  C16  H24  SING  N  N  53  
D97  C    H25  SING  N  N  54  
D97  C2   H26  SING  N  N  55  
D97  C1   H27  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
D97  SMILES            ACDLabs               12.01  "O5CCN(C3C4OCC(C(NCc1cc2c(nc1)cccc2)C3O)O4)CC5"  
D97  InChI             InChI                 1.03   "InChI=1S/C20H25N3O4/c24-19-17(22-11-13-9-14-3-1-2-4-15(14)21-10-13)16-12-26-20(27-16)18(19)23-5-7-25-8-6-23/h1-4,9-10,16-20,22,24H,5-8,11-12H2/t16-,17-,18-,19+,20-/m1/s1"  
D97  InChIKey          InChI                 1.03   BOMGHVJKULNWEW-LTFPLMDUSA-N  
D97  SMILES_CANONICAL  CACTVS                3.385  "O[C@H]1[C@H](NCc2cnc3ccccc3c2)[C@H]4CO[C@H](O4)[C@@H]1N5CCOCC5"  
D97  SMILES            CACTVS                3.385  "O[CH]1[CH](NCc2cnc3ccccc3c2)[CH]4CO[CH](O4)[CH]1N5CCOCC5"  
D97  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1ccc2c(c1)cc(cn2)CN[C@@H]3[C@H]4CO[C@H](O4)[C@@H]([C@H]3O)N5CCOCC5"  
D97  SMILES            "OpenEye OEToolkits"  2.0.6  "c1ccc2c(c1)cc(cn2)CNC3C4COC(O4)C(C3O)N5CCOCC5"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
D97  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1S,2S,3S,4R,5R)-4-(morpholin-4-yl)-2-[(quinolin-3-ylmethyl)amino]-6,8-dioxabicyclo[3.2.1]octan-3-ol (non-preferred name)"  
D97  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(1~{S},2~{S},3~{S},4~{R},5~{R})-4-morpholin-4-yl-2-(quinolin-3-ylmethylamino)-6,8-dioxabicyclo[3.2.1]octan-3-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
D97  "Create component"  2017-10-23  RCSB  
D97  "Initial release"   2020-04-22  RCSB  
##
