data_A1AI7
# 
_chem_comp.id                                    A1AI7 
_chem_comp.name                                  "(3S)-3-{[(1H-pyrazolo[3,4-d]pyrimidin-4-yl)amino]methyl}-1lambda~6~-thiane-1,1-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H15 N5 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-04-01 
_chem_comp.pdbx_modified_date                    2024-05-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        281.334 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AI7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GZ0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AI7 N1  N1  N 0 1 Y N N N N N -0.013 15.236 -0.760 -2.419 -1.744 -0.217 N1  A1AI7 1  
A1AI7 N3  N2  N 0 1 Y N N N N N -3.519 15.659 1.214  -5.445 0.911  0.196  N3  A1AI7 2  
A1AI7 C4  C1  C 0 1 N N N N N N 0.021  15.504 -3.573 0.243  -0.898 -0.068 C4  A1AI7 3  
A1AI7 C5  C2  C 0 1 Y N N N N N -1.178 15.423 -1.418 -2.181 -0.454 -0.008 C5  A1AI7 4  
A1AI7 C6  C3  C 0 1 Y N N N N N -0.075 15.176 0.580  -3.654 -2.207 -0.298 C6  A1AI7 5  
A1AI7 C7  C4  C 0 1 Y N N N N N -2.288 15.480 0.687  -4.576 -0.126 0.033  C7  A1AI7 6  
A1AI7 C8  C5  C 0 1 Y N N N N N -3.777 15.828 -0.912 -3.427 1.803  0.350  C8  A1AI7 7  
A1AI7 C10 C6  C 0 1 N N N N N N -0.628 13.267 -4.214 2.730  -1.100 0.038  C10 A1AI7 8  
A1AI7 O1  O1  O 0 1 N N N N N N 0.440  11.039 -3.285 4.202  0.466  1.572  O1  A1AI7 9  
A1AI7 S   S1  S 0 1 N N N N N N -0.165 11.592 -4.482 4.273  -0.179 0.308  S   A1AI7 10 
A1AI7 O   O2  O 0 1 N N N N N N -1.259 10.877 -5.092 5.370  -1.037 0.026  O   A1AI7 11 
A1AI7 C3  C7  C 0 1 N N S N N N 0.563  14.104 -3.685 1.555  -0.121 0.063  C3  A1AI7 12 
A1AI7 C2  C8  C 0 1 N N N N N N 1.734  14.109 -4.667 1.675  0.868  -1.092 C2  A1AI7 13 
A1AI7 C1  C9  C 0 1 N N N N N N 2.212  12.713 -5.031 2.838  1.828  -0.860 C1  A1AI7 14 
A1AI7 C   C10 C 0 1 N N N N N N 1.116  11.857 -5.667 4.167  1.082  -0.995 C   A1AI7 15 
A1AI7 N   N3  N 0 1 N N N N N N -1.190 15.539 -2.753 -0.887 0.023  0.075  N   A1AI7 16 
A1AI7 C9  C11 C 0 1 Y N N N N N -2.398 15.577 -0.703 -3.280 0.417  0.127  C9  A1AI7 17 
A1AI7 N4  N4  N 0 1 Y N N N N N -4.439 15.879 0.228  -4.699 2.081  0.388  N4  A1AI7 18 
A1AI7 N2  N5  N 0 1 Y N N N N N -1.153 15.253 1.374  -4.710 -1.435 -0.179 N2  A1AI7 19 
A1AI7 H   H1  H 0 1 N N N N N N -3.728 15.634 2.192  -6.412 0.850  0.181  H   A1AI7 20 
A1AI7 H9  H2  H 0 1 N N N N N N 0.785  16.148 -3.113 0.201  -1.376 -1.047 H9  A1AI7 21 
A1AI7 H8  H3  H 0 1 N N N N N N -0.217 15.878 -4.580 0.193  -1.660 0.710  H8  A1AI7 22 
A1AI7 H11 H4  H 0 1 N N N N N N 0.870  15.049 1.086  -3.800 -3.264 -0.469 H11 A1AI7 23 
A1AI7 H12 H5  H 0 1 N N N N N N -4.230 15.961 -1.884 -2.622 2.512  0.468  H12 A1AI7 24 
A1AI7 H14 H6  H 0 1 N N N N N N -1.444 13.299 -3.477 2.768  -1.600 -0.930 H14 A1AI7 25 
A1AI7 H13 H7  H 0 1 N N N N N N -0.975 13.699 -5.164 2.606  -1.842 0.827  H13 A1AI7 26 
A1AI7 H7  H8  H 0 1 N N N N N N 0.885  13.729 -2.702 1.558  0.425  1.007  H7  A1AI7 27 
A1AI7 H6  H9  H 0 1 N N N N N N 2.571  14.658 -4.211 1.842  0.319  -2.019 H6  A1AI7 28 
A1AI7 H5  H10 H 0 1 N N N N N N 1.417  14.622 -5.587 0.750  1.439  -1.175 H5  A1AI7 29 
A1AI7 H4  H11 H 0 1 N N N N N N 2.562  12.212 -4.116 2.797  2.631  -1.596 H4  A1AI7 30 
A1AI7 H3  H12 H 0 1 N N N N N N 3.046  12.802 -5.743 2.763  2.251  0.142  H3  A1AI7 31 
A1AI7 H2  H13 H 0 1 N N N N N N 1.537  10.889 -5.978 4.993  1.786  -0.889 H2  A1AI7 32 
A1AI7 H1  H14 H 0 1 N N N N N N 0.705  12.377 -6.545 4.218  0.602  -1.972 H1  A1AI7 33 
A1AI7 H10 H15 H 0 1 N N N N N N -1.628 16.417 -2.948 -0.727 0.967  0.228  H10 A1AI7 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AI7 O   S   DOUB N N 1  
A1AI7 S   O1  DOUB N N 2  
A1AI7 S   C   SING N N 3  
A1AI7 C   C1  SING N N 4  
A1AI7 C1  C2  SING N N 5  
A1AI7 C2  C3  SING N N 6  
A1AI7 C4  C3  SING N N 7  
A1AI7 N   C4  SING N N 8  
A1AI7 C5  N   SING N N 9  
A1AI7 C5  N1  DOUB Y N 10 
A1AI7 N1  C6  SING Y N 11 
A1AI7 C6  N2  DOUB Y N 12 
A1AI7 N2  C7  SING Y N 13 
A1AI7 C7  N3  SING Y N 14 
A1AI7 N3  N4  SING Y N 15 
A1AI7 N4  C8  DOUB Y N 16 
A1AI7 C8  C9  SING Y N 17 
A1AI7 C9  C5  SING Y N 18 
A1AI7 C7  C9  DOUB Y N 19 
A1AI7 C3  C10 SING N N 20 
A1AI7 C10 S   SING N N 21 
A1AI7 N3  H   SING N N 22 
A1AI7 C4  H9  SING N N 23 
A1AI7 C4  H8  SING N N 24 
A1AI7 C6  H11 SING N N 25 
A1AI7 C8  H12 SING N N 26 
A1AI7 C10 H14 SING N N 27 
A1AI7 C10 H13 SING N N 28 
A1AI7 C3  H7  SING N N 29 
A1AI7 C2  H6  SING N N 30 
A1AI7 C2  H5  SING N N 31 
A1AI7 C1  H4  SING N N 32 
A1AI7 C1  H3  SING N N 33 
A1AI7 C   H2  SING N N 34 
A1AI7 C   H1  SING N N 35 
A1AI7 N   H10 SING N N 36 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AI7 SMILES           ACDLabs              12.01 "O=S1(=O)CCCC(CNc2ncnc3[NH]ncc32)C1"                                                                                          
A1AI7 InChI            InChI                1.06  "InChI=1S/C11H15N5O2S/c17-19(18)3-1-2-8(6-19)4-12-10-9-5-15-16-11(9)14-7-13-10/h5,7-8H,1-4,6H2,(H2,12,13,14,15,16)/t8-/m0/s1" 
A1AI7 InChIKey         InChI                1.06  NIEGNBSQCXGIRB-QMMMGPOBSA-N                                                                                                   
A1AI7 SMILES_CANONICAL CACTVS               3.385 "O=[S]1(=O)CCC[C@@H](CNc2ncnc3[nH]ncc23)C1"                                                                                   
A1AI7 SMILES           CACTVS               3.385 "O=[S]1(=O)CCC[CH](CNc2ncnc3[nH]ncc23)C1"                                                                                     
A1AI7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c2c([nH]n1)ncnc2NC[C@@H]3CCCS(=O)(=O)C3"                                                                                   
A1AI7 SMILES           "OpenEye OEToolkits" 2.0.7 "c1c2c([nH]n1)ncnc2NCC3CCCS(=O)(=O)C3"                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AI7 "SYSTEMATIC NAME" ACDLabs              12.01 "(3S)-3-{[(1H-pyrazolo[3,4-d]pyrimidin-4-yl)amino]methyl}-1lambda~6~-thiane-1,1-dione"           
A1AI7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[[(3~{S})-1,1-bis(oxidanylidene)thian-3-yl]methyl]-1~{H}-pyrazolo[3,4-d]pyrimidin-4-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AI7 "Create component" 2024-04-01 RCSB 
A1AI7 "Initial release"  2024-05-15 RCSB 
# 
