data_487
# 
_chem_comp.id                                    487 
_chem_comp.name                                  "6-[(1S)-1-(azepan-1-yl)ethyl]-N,N-dimethyl-1,3,5-triazine-2,4-diamine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H24 N6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-02-11 
_chem_comp.pdbx_modified_date                    2016-02-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        264.370 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     487 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4Y5N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
487 C4  C1  C 0 1 Y N N -10.488 2.463 0.253  -2.662 0.159  0.186  C4  487 1  
487 C5  C2  C 0 1 N N N -8.175  1.691 0.088  -3.772 2.123  1.179  C5  487 2  
487 C6  C3  C 0 1 N N N -8.788  3.508 1.672  -4.977 -0.102 0.989  C6  487 3  
487 N1  N1  N 0 1 N N N -12.444 0.735 -2.072 -1.589 -2.976 -1.122 N1  487 4  
487 C7  C4  C 0 1 N N N -12.382 6.058 1.540  3.077  1.219  -0.587 C7  487 5  
487 C8  C5  C 0 1 N N N -11.228 6.573 2.382  4.354  0.375  -0.380 C8  487 6  
487 N2  N2  N 0 1 Y N N -10.772 1.588 -0.735 -2.668 -1.118 -0.178 N2  487 7  
487 C9  C6  C 0 1 N N N -11.582 7.645 3.397  4.591  0.198  1.098  C9  487 8  
487 C10 C7  C 0 1 N N N -12.947 7.532 4.038  3.964  -1.098 1.649  C10 487 9  
487 C11 C8  C 0 1 N N N -13.467 6.143 4.350  2.565  -1.354 1.063  C11 487 10 
487 C12 C9  C 0 1 N N N -14.040 5.363 3.178  1.759  -0.082 0.973  C12 487 11 
487 N3  N3  N 0 1 N N N -9.202  2.545 0.657  -3.781 0.715  0.773  N3  487 12 
487 N4  N4  N 0 1 Y N N -11.377 3.248 0.877  -1.575 0.901  -0.011 N4  487 13 
487 C3  C10 C 0 1 Y N N -12.080 1.570 -1.091 -1.589 -1.649 -0.743 C3  487 14 
487 N   N5  N 0 1 Y N N -13.050 2.332 -0.544 -0.507 -0.900 -0.941 N   487 15 
487 C2  C11 C 0 1 Y N N -12.636 3.140 0.437  -0.503 0.370  -0.573 C2  487 16 
487 C1  C12 C 0 1 N N S -13.684 3.993 1.131  0.724  1.214  -0.799 C1  487 17 
487 C   C13 C 0 1 N N N -14.505 4.710 0.063  0.830  1.572  -2.283 C   487 18 
487 N5  N6  N 0 1 N N N -13.114 4.929 2.126  1.918  0.463  -0.390 N5  487 19 
487 H1  H1  H 0 1 N N N -7.206  1.921 0.555  -2.804 2.564  0.940  H1  487 20 
487 H2  H2  H 0 1 N N N -8.431  0.637 0.273  -4.557 2.660  0.648  H2  487 21 
487 H3  H3  H 0 1 N N N -8.110  1.868 -0.996 -3.947 2.192  2.253  H3  487 22 
487 H4  H4  H 0 1 N N N -9.662  4.083 2.011  -4.922 -0.575 1.970  H4  487 23 
487 H5  H5  H 0 1 N N N -8.347  2.973 2.526  -5.863 0.531  0.941  H5  487 24 
487 H6  H6  H 0 1 N N N -8.042  4.194 1.244  -5.037 -0.870 0.218  H6  487 25 
487 H7  H7  H 0 1 N N N -11.643 0.234 -2.398 -2.378 -3.522 -0.977 H7  487 26 
487 H8  H8  H 0 1 N N N -13.123 0.088 -1.724 -0.801 -3.363 -1.534 H8  487 27 
487 H9  H9  H 0 1 N N N -11.980 5.738 0.567  3.083  2.051  0.117  H9  487 28 
487 H10 H10 H 0 1 N N N -13.092 6.885 1.389  3.075  1.615  -1.603 H10 487 29 
487 H11 H11 H 0 1 N N N -10.800 5.719 2.927  4.225  -0.601 -0.848 H11 487 30 
487 H12 H12 H 0 1 N N N -10.472 6.989 1.700  5.206  0.886  -0.828 H12 487 31 
487 H13 H13 H 0 1 N N N -10.830 7.609 4.199  5.666  0.175  1.282  H13 487 32 
487 H14 H14 H 0 1 N N N -11.529 8.619 2.889  4.164  1.049  1.628  H14 487 33 
487 H15 H15 H 0 1 N N N -12.912 8.090 4.985  4.611  -1.939 1.400  H15 487 34 
487 H16 H16 H 0 1 N N N -13.669 8.008 3.358  3.886  -1.022 2.733  H16 487 35 
487 H17 H17 H 0 1 N N N -14.259 6.243 5.106  2.669  -1.781 0.066  H17 487 36 
487 H18 H18 H 0 1 N N N -12.634 5.558 4.767  2.036  -2.063 1.701  H18 487 37 
487 H19 H19 H 0 1 N N N -14.802 5.998 2.703  0.708  -0.297 1.163  H19 487 38 
487 H20 H20 H 0 1 N N N -14.518 4.461 3.587  2.126  0.639  1.703  H20 487 39 
487 H21 H21 H 0 1 N N N -14.364 3.310 1.662  0.650  2.128  -0.209 H21 487 40 
487 H22 H22 H 0 1 N N N -15.271 5.334 0.546  -0.056 2.130  -2.586 H22 487 41 
487 H23 H23 H 0 1 N N N -13.843 5.346 -0.543 1.717  2.184  -2.447 H23 487 42 
487 H24 H24 H 0 1 N N N -14.993 3.967 -0.585 0.904  0.659  -2.873 H24 487 43 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
487 N1  C3  SING N N 1  
487 C3  N2  DOUB Y N 2  
487 C3  N   SING Y N 3  
487 N2  C4  SING Y N 4  
487 N   C2  DOUB Y N 5  
487 C   C1  SING N N 6  
487 C5  N3  SING N N 7  
487 C4  N3  SING N N 8  
487 C4  N4  DOUB Y N 9  
487 C2  N4  SING Y N 10 
487 C2  C1  SING N N 11 
487 N3  C6  SING N N 12 
487 C1  N5  SING N N 13 
487 C7  N5  SING N N 14 
487 C7  C8  SING N N 15 
487 N5  C12 SING N N 16 
487 C8  C9  SING N N 17 
487 C12 C11 SING N N 18 
487 C9  C10 SING N N 19 
487 C10 C11 SING N N 20 
487 C5  H1  SING N N 21 
487 C5  H2  SING N N 22 
487 C5  H3  SING N N 23 
487 C6  H4  SING N N 24 
487 C6  H5  SING N N 25 
487 C6  H6  SING N N 26 
487 N1  H7  SING N N 27 
487 N1  H8  SING N N 28 
487 C7  H9  SING N N 29 
487 C7  H10 SING N N 30 
487 C8  H11 SING N N 31 
487 C8  H12 SING N N 32 
487 C9  H13 SING N N 33 
487 C9  H14 SING N N 34 
487 C10 H15 SING N N 35 
487 C10 H16 SING N N 36 
487 C11 H17 SING N N 37 
487 C11 H18 SING N N 38 
487 C12 H19 SING N N 39 
487 C12 H20 SING N N 40 
487 C1  H21 SING N N 41 
487 C   H22 SING N N 42 
487 C   H23 SING N N 43 
487 C   H24 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
487 SMILES           ACDLabs              12.01 "n1c(nc(nc1C(N2CCCCCC2)C)N(C)C)N"                                                                                       
487 InChI            InChI                1.03  "InChI=1S/C13H24N6/c1-10(19-8-6-4-5-7-9-19)11-15-12(14)17-13(16-11)18(2)3/h10H,4-9H2,1-3H3,(H2,14,15,16,17)/t10-/m0/s1" 
487 InChIKey         InChI                1.03  VXAHGJQOHMSESG-JTQLQIEISA-N                                                                                             
487 SMILES_CANONICAL CACTVS               3.385 "C[C@H](N1CCCCCC1)c2nc(N)nc(n2)N(C)C"                                                                                   
487 SMILES           CACTVS               3.385 "C[CH](N1CCCCCC1)c2nc(N)nc(n2)N(C)C"                                                                                    
487 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C[C@@H](c1nc(nc(n1)N(C)C)N)N2CCCCCC2"                                                                                  
487 SMILES           "OpenEye OEToolkits" 1.9.2 "CC(c1nc(nc(n1)N(C)C)N)N2CCCCCC2"                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
487 "SYSTEMATIC NAME" ACDLabs              12.01 "6-[(1S)-1-(azepan-1-yl)ethyl]-N,N-dimethyl-1,3,5-triazine-2,4-diamine"   
487 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "6-[(1S)-1-(azepan-1-yl)ethyl]-N2,N2-dimethyl-1,3,5-triazine-2,4-diamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
487 "Create component" 2015-02-11 EBI  
487 "Initial release"  2016-03-02 RCSB 
# 
