data_PB6
# 
_chem_comp.id                                    PB6 
_chem_comp.name                                  "3-[(1E)-but-1-en-1-yl]-1-(2,2-diphosphonoethyl)pyridinium" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H18 N O6 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2009-07-31 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        322.211 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PB6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ICZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PB6 C7   C7   C 0 1 N N N 9.490  18.387 151.578 -0.998 -1.205 -0.704 C7   PB6 1  
PB6 C8   C8   C 0 1 N N N 8.652  18.372 150.275 -1.786 -0.345 0.287  C8   PB6 2  
PB6 P9   P9   P 0 1 N N N 6.979  17.874 150.797 -1.081 1.336  0.326  P9   PB6 3  
PB6 O10  O10  O 0 1 N N N 7.090  16.518 151.431 0.460  1.261  0.786  O10  PB6 4  
PB6 O11  O11  O 0 1 N N N 6.517  18.951 151.692 -1.165 1.937  -1.024 O11  PB6 5  
PB6 N12  N12  N 1 1 Y N N 10.960 18.636 151.356 0.368  -1.394 -0.210 N12  PB6 6  
PB6 O12  O12  O 0 1 N N N 6.145  17.776 149.533 -1.910 2.240  1.369  O12  PB6 7  
PB6 C13  C13  C 0 1 Y N N 11.675 18.274 150.240 0.600  -2.331 0.689  C13  PB6 8  
PB6 C14  C14  C 0 1 Y N N 13.042 18.618 150.168 1.874  -2.545 1.184  C14  PB6 9  
PB6 P14  P14  P 0 1 N N N 8.650  19.996 149.430 -3.530 -0.261 -0.234 P14  PB6 10 
PB6 C15  C15  C 0 1 Y N N 13.668 19.325 151.236 2.919  -1.761 0.727  C15  PB6 11 
PB6 O15  O15  O 0 1 N N N 8.326  21.000 150.513 -4.155 -1.745 -0.259 O15  PB6 12 
PB6 C16  C16  C 0 1 Y N N 12.892 19.672 152.370 2.641  -0.775 -0.226 C16  PB6 13 
PB6 O16  O16  O 0 1 N N N 7.739  19.827 148.213 -4.357 0.651  0.804  O16  PB6 14 
PB6 C17  C17  C 0 1 Y N N 11.549 19.323 152.341 1.330  -0.626 -0.679 C17  PB6 15 
PB6 O17  O17  O 0 1 N N N 10.044 20.336 148.980 -3.614 0.332  -1.587 O17  PB6 16 
PB6 C18  C18  C 0 1 N N N 13.318 20.456 153.584 3.719  0.091  -0.748 C18  PB6 17 
PB6 C19  C19  C 0 1 N N N 14.564 20.891 153.719 4.962  -0.064 -0.313 C19  PB6 18 
PB6 C20  C20  C 0 1 N N N 15.123 21.684 154.897 6.061  0.819  -0.846 C20  PB6 19 
PB6 C21  C21  C 0 1 N N N 14.086 22.017 155.948 6.775  1.505  0.321  C21  PB6 20 
PB6 H7   H7   H 0 1 N N N 9.102  19.190 152.223 -1.484 -2.175 -0.809 H7   PB6 21 
PB6 H7A  H7A  H 0 1 N N N 9.381  17.406 152.064 -0.969 -0.707 -1.673 H7A  PB6 22 
PB6 H8   H8   H 0 1 N N N 9.074  17.678 149.533 -1.724 -0.789 1.281  H8   PB6 23 
PB6 H13  H13  H 0 1 N N N 11.200 17.736 149.433 -0.217 -2.941 1.043  H13  PB6 24 
PB6 H14  H14  H 0 1 N N N 13.618 18.343 149.297 2.051  -3.316 1.920  H14  PB6 25 
PB6 H15  H15  H 0 1 N N N 14.713 19.591 151.182 3.923  -1.906 1.097  H15  PB6 26 
PB6 H17  H17  H 0 1 N N N 10.934 19.629 153.175 1.101  0.128  -1.417 H17  PB6 27 
PB6 H18  H18  H 0 1 N N N 12.596 20.668 154.359 3.494  0.849  -1.483 H18  PB6 28 
PB6 H19  H19  H 0 1 N N N 15.250 20.662 152.917 5.187  -0.822 0.422  H19  PB6 29 
PB6 H20  H20  H 0 1 N N N 15.911 21.081 155.372 6.776  0.213  -1.403 H20  PB6 30 
PB6 H20A H20A H 0 0 N N N 15.534 22.628 154.510 5.634  1.575  -1.505 H20A PB6 31 
PB6 H21  H21  H 0 1 N N N 14.558 22.586 156.762 7.570  2.143  -0.064 H21  PB6 32 
PB6 H21A H21A H 0 0 N N N 13.286 22.621 155.495 6.060  2.111  0.878  H21A PB6 33 
PB6 H21B H21B H 0 0 N N N 13.660 21.086 156.350 7.202  0.749  0.980  H21B PB6 34 
PB6 H151 H151 H 0 0 N N N 6.834  16.573 152.344 0.590  0.877  1.663  H151 PB6 35 
PB6 H16  H16  H 0 1 N N N 5.465  18.439 149.550 -1.589 3.150  1.442  H16  PB6 36 
PB6 H171 H171 H 0 0 N N N 9.066  21.582 150.637 -3.768 -2.323 -0.930 H171 PB6 37 
PB6 H181 H181 H 0 0 N N N 8.240  19.972 147.419 -4.035 1.561  0.871  H181 PB6 38 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PB6 C7  C8   SING N N 1  
PB6 C7  N12  SING N N 2  
PB6 C7  H7   SING N N 3  
PB6 C7  H7A  SING N N 4  
PB6 C8  P9   SING N N 5  
PB6 C8  P14  SING N N 6  
PB6 C8  H8   SING N N 7  
PB6 P9  O10  SING N N 8  
PB6 P9  O11  DOUB N N 9  
PB6 P9  O12  SING N N 10 
PB6 N12 C13  DOUB Y N 11 
PB6 N12 C17  SING Y N 12 
PB6 C13 C14  SING Y N 13 
PB6 C13 H13  SING N N 14 
PB6 C14 C15  DOUB Y N 15 
PB6 C14 H14  SING N N 16 
PB6 P14 O15  SING N N 17 
PB6 P14 O16  SING N N 18 
PB6 P14 O17  DOUB N N 19 
PB6 C15 C16  SING Y N 20 
PB6 C15 H15  SING N N 21 
PB6 C16 C17  DOUB Y N 22 
PB6 C16 C18  SING N N 23 
PB6 C17 H17  SING N N 24 
PB6 C18 C19  DOUB N N 25 
PB6 C18 H18  SING N N 26 
PB6 C19 C20  SING N N 27 
PB6 C19 H19  SING N N 28 
PB6 C20 C21  SING N E 29 
PB6 C20 H20  SING N N 30 
PB6 C20 H20A SING N N 31 
PB6 C21 H21  SING N N 32 
PB6 C21 H21A SING N N 33 
PB6 C21 H21B SING N N 34 
PB6 O10 H151 SING N N 35 
PB6 O12 H16  SING N N 36 
PB6 O15 H171 SING N N 37 
PB6 O16 H181 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PB6 SMILES           ACDLabs              11.02 "O=P(O)(O)C(P(=O)(O)O)C[n+]1cccc(/C=C/CC)c1"                                                                                       
PB6 SMILES_CANONICAL CACTVS               3.352 "CC/C=C/c1ccc[n+](CC([P](O)(O)=O)[P](O)(O)=O)c1"                                                                                   
PB6 SMILES           CACTVS               3.352 "CCC=Cc1ccc[n+](CC([P](O)(O)=O)[P](O)(O)=O)c1"                                                                                     
PB6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC/C=C/c1ccc[n+](c1)CC(P(=O)(O)O)P(=O)(O)O"                                                                                       
PB6 SMILES           "OpenEye OEToolkits" 1.7.0 "CCC=Cc1ccc[n+](c1)CC(P(=O)(O)O)P(=O)(O)O"                                                                                         
PB6 InChI            InChI                1.03  "InChI=1S/C11H17NO6P2/c1-2-3-5-10-6-4-7-12(8-10)9-11(19(13,14)15)20(16,17)18/h3-8,11H,2,9H2,1H3,(H3-,13,14,15,16,17,18)/p+1/b5-3+" 
PB6 InChIKey         InChI                1.03  QYIWBGUVYSKCTG-HWKANZROSA-O                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PB6 "SYSTEMATIC NAME" ACDLabs              11.02 "3-[(1E)-but-1-en-1-yl]-1-(2,2-diphosphonoethyl)pyridinium"                   
PB6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[2-[3-[(E)-but-1-enyl]pyridin-1-ium-1-yl]-1-phosphono-ethyl]phosphonic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PB6 "Create component"     2009-07-31 RCSB 
PB6 "Modify aromatic_flag" 2011-06-04 RCSB 
PB6 "Modify descriptor"    2011-06-04 RCSB 
# 
