data_OY6
# 
_chem_comp.id                                    OY6 
_chem_comp.name                                  "~{N}-(2-methoxyphenyl)-4-[[2-(4-oxidanylidene-3~{H}-quinazolin-2-yl)ethyl-(thiophen-2-ylmethyl)carbamoyl]amino]benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H27 N5 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-09-28 
_chem_comp.pdbx_modified_date                    2023-10-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        553.631 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OY6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8B6M 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OY6 N12  N1  N 0 1 N N N -39.611 -12.905 12.717 -5.633  -0.828 -0.239 N12  OY6 1  
OY6 C17  C1  C 0 1 Y N N -39.096 -1.943  5.992  7.441   -1.385 -0.077 C17  OY6 2  
OY6 C20  C2  C 0 1 Y N N -39.136 -5.754  7.621  2.772   -0.561 -1.184 C20  OY6 3  
OY6 C21  C3  C 0 1 Y N N -39.276 -7.218  7.859  1.556   0.018  -0.898 C21  OY6 4  
OY6 C22  C4  C 0 1 Y N N -40.578 -7.674  8.484  1.392   0.756  0.270  C22  OY6 5  
OY6 C24  C5  C 0 1 N N N -40.347 -11.879 10.556 -3.413  0.553  0.186  C24  OY6 6  
OY6 C26  C6  C 0 1 N N N -38.720 -11.897 12.295 -5.081  -1.139 0.895  C26  OY6 7  
OY6 C28  C7  C 0 1 Y N N -40.583 -14.190 14.594 -7.376  -1.084 -1.874 C28  OY6 8  
OY6 C01  C8  C 0 1 N N N -37.274 -3.355  3.041  9.712   1.080  1.419  C01  OY6 9  
OY6 N02  N2  N 0 1 N N N -39.274 -3.225  6.637  6.178   -0.879 0.254  N02  OY6 10 
OY6 O03  O1  O 0 1 N N N -38.269 -3.315  4.029  8.491   0.443  1.039  O03  OY6 11 
OY6 S04  S1  S 0 1 Y N N -37.183 -11.711 7.150  -0.887  4.506  -0.259 S04  OY6 12 
OY6 C05  C9  C 0 1 Y N N -38.635 -2.032  4.531  8.591   -0.710 0.326  C05  OY6 13 
OY6 N06  N3  N 0 1 N N N -40.414 -9.027  8.659  0.160   1.342  0.556  N06  OY6 14 
OY6 O07  O2  O 0 1 N N N -40.667 -2.598  8.344  5.292   -1.671 -1.622 O07  OY6 15 
OY6 C08  C10 C 0 1 Y N N -38.499 -0.739  3.712  9.838   -1.219 0.000  C08  OY6 16 
OY6 N09  N4  N 0 1 N N N -40.309 -10.980 9.565  -2.172  1.235  0.565  N09  OY6 17 
OY6 O10  O3  O 0 1 N N N -41.388 -9.117  10.903 -0.936  -0.320 -0.428 O10  OY6 18 
OY6 C11  C11 C 0 1 Y N N -38.911 0.601   4.312  9.939   -2.392 -0.724 C11  OY6 19 
OY6 O13  O4  O 0 1 N N N -37.179 -10.668 15.345 -7.208  -3.553 2.198  O13  OY6 20 
OY6 C14  C12 C 0 1 Y N N -39.422 0.683   5.746  8.798   -3.062 -1.125 C14  OY6 21 
OY6 N15  N5  N 0 1 N N N -37.878 -11.110 13.211 -5.594  -2.064 1.747  N15  OY6 22 
OY6 C16  C13 C 0 1 Y N N -39.519 -0.605  6.559  7.550   -2.561 -0.804 C16  OY6 23 
OY6 C18  C14 C 0 1 N N N -40.122 -3.423  7.735  5.147   -1.027 -0.601 C18  OY6 24 
OY6 C19  C15 C 0 1 Y N N -40.273 -4.865  8.086  3.842   -0.408 -0.298 C19  OY6 25 
OY6 C23  C16 C 0 1 N N N -40.758 -9.628  9.899  -0.981  0.715  0.208  C23  OY6 26 
OY6 C25  C17 C 0 1 N N N -38.786 -11.723 10.819 -3.805  -0.438 1.284  C25  OY6 27 
OY6 C27  C18 C 0 1 Y N N -39.635 -13.113 14.114 -6.782  -1.418 -0.655 C27  OY6 28 
OY6 C29  C19 C 0 1 Y N N -40.739 -14.435 16.047 -8.543  -1.708 -2.257 C29  OY6 29 
OY6 C30  C20 C 0 1 Y N N -39.917 -13.615 16.991 -9.136  -2.666 -1.446 C30  OY6 30 
OY6 C31  C21 C 0 1 Y N N -38.955 -12.596 16.498 -8.568  -3.013 -0.239 C31  OY6 31 
OY6 C32  C22 C 0 1 Y N N -38.857 -12.302 15.070 -7.389  -2.393 0.167  C32  OY6 32 
OY6 C33  C23 C 0 1 N N N -37.863 -11.332 14.626 -6.737  -2.722 1.444  C33  OY6 33 
OY6 C34  C24 C 0 1 N N N -39.659 -11.667 8.394  -2.227  2.482  1.331  C34  OY6 34 
OY6 C35  C25 C 0 1 Y N N -38.738 -11.454 7.167  -2.284  3.652  0.383  C35  OY6 35 
OY6 C36  C26 C 0 1 Y N N -39.182 -11.293 5.764  -3.402  4.200  -0.096 C36  OY6 36 
OY6 C37  C27 C 0 1 Y N N -37.877 -11.310 4.817  -3.207  5.269  -0.953 C37  OY6 37 
OY6 C38  C28 C 0 1 Y N N -36.685 -11.562 5.659  -1.930  5.590  -1.170 C38  OY6 38 
OY6 C39  C29 C 0 1 Y N N -41.713 -6.828  8.966  2.456   0.910  1.154  C39  OY6 39 
OY6 C40  C30 C 0 1 Y N N -41.567 -5.346  8.712  3.674   0.333  0.875  C40  OY6 40 
OY6 H201 H1  H 0 0 N N N -38.262 -5.343  7.138  2.897   -1.137 -2.089 H201 OY6 41 
OY6 H211 H2  H 0 0 N N N -38.493 -7.915  7.600  0.729   -0.099 -1.582 H211 OY6 42 
OY6 H241 H3  H 0 0 N N N -40.972 -11.573 11.408 -4.207  1.289  0.060  H241 OY6 43 
OY6 H242 H4  H 0 0 N N N -40.642 -12.887 10.228 -3.261  0.017  -0.750 H242 OY6 44 
OY6 H281 H5  H 0 0 N N N -41.143 -14.777 13.881 -6.924  -0.340 -2.512 H281 OY6 45 
OY6 H013 H6  H 0 0 N N N -37.091 -4.399  2.746  9.490   1.987  1.981  H013 OY6 46 
OY6 H011 H7  H 0 0 N N N -37.605 -2.779  2.164  10.297  0.402  2.040  H011 OY6 47 
OY6 H012 H8  H 0 0 N N N -36.346 -2.918  3.438  10.281  1.337  0.526  H012 OY6 48 
OY6 H021 H9  H 0 0 N N N -38.766 -4.010  6.282  6.045   -0.422 1.100  H021 OY6 49 
OY6 H061 H10 H 0 0 N N N -40.053 -9.588  7.914  0.123   2.201  1.005  H061 OY6 50 
OY6 H081 H11 H 0 0 N N N -38.109 -0.779  2.706  10.732  -0.698 0.312  H081 OY6 51 
OY6 H111 H12 H 0 0 N N N -38.840 1.499   3.716  10.912  -2.786 -0.977 H111 OY6 52 
OY6 H141 H13 H 0 0 N N N -39.709 1.631   6.177  8.882   -3.977 -1.691 H141 OY6 53 
OY6 H151 H14 H 0 0 N N N -37.294 -10.393 12.831 -5.136  -2.255 2.581  H151 OY6 54 
OY6 H161 H15 H 0 0 N N N -39.901 -0.560  7.568  6.661   -3.089 -1.115 H161 OY6 55 
OY6 H251 H16 H 0 0 N N N -38.210 -12.500 10.296 -3.011  -1.173 1.411  H251 OY6 56 
OY6 H252 H17 H 0 0 N N N -38.424 -10.730 10.514 -3.957  0.099  2.220  H252 OY6 57 
OY6 H291 H18 H 0 0 N N N -41.426 -15.183 16.414 -9.001  -1.449 -3.200 H291 OY6 58 
OY6 H301 H19 H 0 0 N N N -40.026 -13.767 18.055 -10.051 -3.145 -1.764 H301 OY6 59 
OY6 H311 H20 H 0 0 N N N -38.324 -12.069 17.199 -9.035  -3.759 0.387  H311 OY6 60 
OY6 H342 H21 H 0 0 N N N -40.545 -12.095 7.902  -3.115  2.483  1.963  H342 OY6 61 
OY6 H341 H22 H 0 0 N N N -39.109 -12.464 8.916  -1.337  2.564  1.956  H341 OY6 62 
OY6 H361 H23 H 0 0 N N N -40.204 -11.183 5.432  -4.385  3.836  0.165  H361 OY6 63 
OY6 H371 H24 H 0 0 N N N -37.873 -11.162 3.747  -4.026  5.803  -1.412 H371 OY6 64 
OY6 H381 H25 H 0 0 N N N -35.663 -11.631 5.316  -1.589  6.393  -1.807 H381 OY6 65 
OY6 H391 H26 H 0 0 N N N -42.577 -7.247  9.461  2.325   1.483  2.060  H391 OY6 66 
OY6 H401 H27 H 0 0 N N N -42.356 -4.654  8.967  4.499   0.453  1.562  H401 OY6 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OY6 C01 O03  SING N N 1  
OY6 C08 C11  DOUB Y N 2  
OY6 C08 C05  SING Y N 3  
OY6 O03 C05  SING N N 4  
OY6 C11 C14  SING Y N 5  
OY6 C05 C17  DOUB Y N 6  
OY6 C37 C38  DOUB Y N 7  
OY6 C37 C36  SING Y N 8  
OY6 C38 S04  SING Y N 9  
OY6 C14 C16  DOUB Y N 10 
OY6 C36 C35  DOUB Y N 11 
OY6 C17 C16  SING Y N 12 
OY6 C17 N02  SING N N 13 
OY6 N02 C18  SING N N 14 
OY6 S04 C35  SING Y N 15 
OY6 C35 C34  SING N N 16 
OY6 C20 C21  DOUB Y N 17 
OY6 C20 C19  SING Y N 18 
OY6 C18 C19  SING N N 19 
OY6 C18 O07  DOUB N N 20 
OY6 C21 C22  SING Y N 21 
OY6 C19 C40  DOUB Y N 22 
OY6 C34 N09  SING N N 23 
OY6 C22 N06  SING N N 24 
OY6 C22 C39  DOUB Y N 25 
OY6 N06 C23  SING N N 26 
OY6 C40 C39  SING Y N 27 
OY6 N09 C23  SING N N 28 
OY6 N09 C24  SING N N 29 
OY6 C23 O10  DOUB N N 30 
OY6 C24 C25  SING N N 31 
OY6 C25 C26  SING N N 32 
OY6 C26 N12  DOUB N N 33 
OY6 C26 N15  SING N N 34 
OY6 N12 C27  SING N N 35 
OY6 N15 C33  SING N N 36 
OY6 C27 C28  DOUB Y N 37 
OY6 C27 C32  SING Y N 38 
OY6 C28 C29  SING Y N 39 
OY6 C33 C32  SING N N 40 
OY6 C33 O13  DOUB N N 41 
OY6 C32 C31  DOUB Y N 42 
OY6 C29 C30  DOUB Y N 43 
OY6 C31 C30  SING Y N 44 
OY6 C20 H201 SING N N 45 
OY6 C21 H211 SING N N 46 
OY6 C24 H241 SING N N 47 
OY6 C24 H242 SING N N 48 
OY6 C28 H281 SING N N 49 
OY6 C01 H013 SING N N 50 
OY6 C01 H011 SING N N 51 
OY6 C01 H012 SING N N 52 
OY6 N02 H021 SING N N 53 
OY6 N06 H061 SING N N 54 
OY6 C08 H081 SING N N 55 
OY6 C11 H111 SING N N 56 
OY6 C14 H141 SING N N 57 
OY6 N15 H151 SING N N 58 
OY6 C16 H161 SING N N 59 
OY6 C25 H251 SING N N 60 
OY6 C25 H252 SING N N 61 
OY6 C29 H291 SING N N 62 
OY6 C30 H301 SING N N 63 
OY6 C31 H311 SING N N 64 
OY6 C34 H342 SING N N 65 
OY6 C34 H341 SING N N 66 
OY6 C36 H361 SING N N 67 
OY6 C37 H371 SING N N 68 
OY6 C38 H381 SING N N 69 
OY6 C39 H391 SING N N 70 
OY6 C40 H401 SING N N 71 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OY6 InChI            InChI                1.06  "InChI=1S/C30H27N5O4S/c1-39-26-11-5-4-10-25(26)33-28(36)20-12-14-21(15-13-20)31-30(38)35(19-22-7-6-18-40-22)17-16-27-32-24-9-3-2-8-23(24)29(37)34-27/h2-15,18H,16-17,19H2,1H3,(H,31,38)(H,33,36)(H,32,34,37)" 
OY6 InChIKey         InChI                1.06  CHCNDJNLIDGUFS-UHFFFAOYSA-N                                                                                                                                                                                   
OY6 SMILES_CANONICAL CACTVS               3.385 "COc1ccccc1NC(=O)c2ccc(NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5sccc5)cc2"                                                                                                                                            
OY6 SMILES           CACTVS               3.385 "COc1ccccc1NC(=O)c2ccc(NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5sccc5)cc2"                                                                                                                                            
OY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccccc1NC(=O)c2ccc(cc2)NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5cccs5"                                                                                                                                            
OY6 SMILES           "OpenEye OEToolkits" 2.0.7 "COc1ccccc1NC(=O)c2ccc(cc2)NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5cccs5"                                                                                                                                            
# 
_pdbx_chem_comp_identifier.comp_id           OY6 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-(2-methoxyphenyl)-4-[[2-(4-oxidanylidene-3~{H}-quinazolin-2-yl)ethyl-(thiophen-2-ylmethyl)carbamoyl]amino]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OY6 "Create component" 2022-09-28 PDBE 
OY6 "Modify formula"   2023-05-15 PDBE 
OY6 "Initial release"  2023-10-11 RCSB 
# 
