data_LF6
#

_chem_comp.id                                   LF6
_chem_comp.name                                 "{(1R,2R)-2-[(Z)-(3-methyl-1,2,4-thiadiazol-5(2H)-ylidene)amino]cyclopentyl}methanol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C9 H15 N3 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2022-03-04
_chem_comp.pdbx_modified_date                   2022-03-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       213.300
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    LF6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5SKW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LF6  N1   N1   N  0  1  N  N  N  60.433  22.726  87.530   3.171   0.258   0.976  N1   LF6   1  
LF6  N3   N2   N  0  1  N  N  N  59.043  22.447  85.737   2.282  -0.210  -1.048  N3   LF6   2  
LF6  C4   C1   C  0  1  N  N  R  57.266  19.383  86.967  -1.243  -0.701  -0.022  C4   LF6   3  
LF6  C5   C2   C  0  1  N  N  N  56.916  18.150  86.140  -1.972  -2.056  -0.195  C5   LF6   4  
LF6  C6   C3   C  0  1  N  N  N  55.951  17.403  87.036  -3.416  -1.771   0.266  C6   LF6   5  
LF6  C7   C4   C  0  1  N  N  N  55.023  18.510  87.470  -3.638  -0.257   0.103  C7   LF6   6  
LF6  C8   C5   C  0  1  N  N  R  55.963  19.687  87.765  -2.322   0.325  -0.451  C8   LF6   7  
LF6  C1   C6   C  0  1  N  N  N  59.953  24.718  86.191   4.664   0.246  -0.993  C1   LF6   8  
LF6  C2   C7   C  0  1  N  N  N  59.801  23.270  86.498   3.313   0.088  -0.343  C2   LF6   9  
LF6  S1   S1   S  0  1  N  N  N  59.710  21.268  87.885   1.522  -0.004   1.301  S1   LF6  10  
LF6  C3   C8   C  0  1  N  N  N  58.735  21.380  86.439   1.109  -0.325  -0.395  C3   LF6  11  
LF6  N2   N3   N  0  1  N  N  N  57.758  20.506  86.117  -0.072  -0.620  -0.899  N2   LF6  12  
LF6  C9   C9   C  0  1  N  N  N  56.160  19.800  89.263  -2.037   1.693   0.171  C9   LF6  13  
LF6  O1   O1   O  0  1  N  N  N  57.073  20.831  89.592  -2.975   2.648  -0.329  O1   LF6  14  
LF6  H1   H1   H  0  1  N  N  N  61.212  23.124  88.013   3.866   0.479   1.616  H1   LF6  15  
LF6  H3   H3   H  0  1  N  N  N  58.052  19.109  87.687  -0.956  -0.547   1.019  H3   LF6  16  
LF6  H4   H4   H  0  1  N  N  N  56.437  18.433  85.191  -1.959  -2.365  -1.240  H4   LF6  17  
LF6  H5   H5   H  0  1  N  N  N  57.811  17.546  85.932  -1.514  -2.819   0.435  H5   LF6  18  
LF6  H6   H6   H  0  1  N  N  N  55.412  16.621  86.482  -4.122  -2.321  -0.356  H6   LF6  19  
LF6  H7   H7   H  0  1  N  N  N  56.468  16.952  87.896  -3.537  -2.056   1.311  H7   LF6  20  
LF6  H8   H8   H  0  1  N  N  N  54.316  18.766  86.667  -4.452  -0.073  -0.598  H8   LF6  21  
LF6  H9   H9   H  0  1  N  N  N  54.464  18.221  88.372  -3.868   0.192   1.069  H9   LF6  22  
LF6  H10  H10  H  0  1  N  N  N  55.515  20.615  87.381  -2.365   0.400  -1.537  H10  LF6  23  
LF6  H11  H11  H  0  1  N  N  N  59.371  24.966  85.291   4.574   0.070  -2.065  H11  LF6  24  
LF6  H12  H12  H  0  1  N  N  N  59.586  25.313  87.040   5.034   1.257  -0.820  H12  LF6  25  
LF6  H13  H13  H  0  1  N  N  N  61.015  24.946  86.015   5.360  -0.474  -0.563  H13  LF6  26  
LF6  H15  H15  H  0  1  N  N  N  55.191  20.017  89.735  -2.131   1.626   1.255  H15  LF6  27  
LF6  H16  H16  H  0  1  N  N  N  56.548  18.844  89.645  -1.026   2.007  -0.087  H16  LF6  28  
LF6  H17  H17  H  0  1  N  N  N  57.174  20.876  90.536  -2.854   3.540   0.023  H17  LF6  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LF6  N3  C3   SING  N  N   1  
LF6  N3  C2   DOUB  N  N   2  
LF6  N2  C3   DOUB  N  N   3  
LF6  N2  C4   SING  N  N   4  
LF6  C5  C4   SING  N  N   5  
LF6  C5  C6   SING  N  N   6  
LF6  C1  C2   SING  N  N   7  
LF6  C3  S1   SING  N  N   8  
LF6  C2  N1   SING  N  N   9  
LF6  C4  C8   SING  N  N  10  
LF6  C6  C7   SING  N  N  11  
LF6  C7  C8   SING  N  N  12  
LF6  N1  S1   SING  N  N  13  
LF6  C8  C9   SING  N  N  14  
LF6  C9  O1   SING  N  N  15  
LF6  N1  H1   SING  N  N  16  
LF6  C4  H3   SING  N  N  17  
LF6  C5  H4   SING  N  N  18  
LF6  C5  H5   SING  N  N  19  
LF6  C6  H6   SING  N  N  20  
LF6  C6  H7   SING  N  N  21  
LF6  C7  H8   SING  N  N  22  
LF6  C7  H9   SING  N  N  23  
LF6  C8  H10  SING  N  N  24  
LF6  C1  H11  SING  N  N  25  
LF6  C1  H12  SING  N  N  26  
LF6  C1  H13  SING  N  N  27  
LF6  C9  H15  SING  N  N  28  
LF6  C9  H16  SING  N  N  29  
LF6  O1  H17  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LF6  SMILES            ACDLabs               12.01  "CC1=N\C(=N\C2CCCC2CO)SN1"  
LF6  InChI             InChI                 1.03   "InChI=1S/C9H15N3OS/c1-6-10-9(14-12-6)11-8-4-2-3-7(8)5-13/h7-8,13H,2-5H2,1H3,(H,10,11,12)/t7-,8+/m0/s1"  
LF6  InChIKey          InChI                 1.03   QUKZXHGECCPEIZ-JGVFFNPUSA-N  
LF6  SMILES_CANONICAL  CACTVS                3.385  "CC1=NC(SN1)=N[C@@H]2CCC[C@H]2CO"  
LF6  SMILES            CACTVS                3.385  "CC1=NC(SN1)=N[CH]2CCC[CH]2CO"  
LF6  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1=N/C(=N/[C@@H]2CCC[C@H]2CO)/SN1"  
LF6  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1=NC(=NC2CCCC2CO)SN1"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
LF6  "SYSTEMATIC NAME"  ACDLabs               12.01  "{(1R,2R)-2-[(Z)-(3-methyl-1,2,4-thiadiazol-5(2H)-ylidene)amino]cyclopentyl}methanol"  
LF6  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(1~{R},2~{R})-2-[(~{Z})-(3-methyl-2~{H}-1,2,4-thiadiazol-5-ylidene)amino]cyclopentyl]methanol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LF6  "Create component"  2022-03-04  RCSB  
LF6  "Initial release"   2022-03-16  RCSB  
##
