data_LD6
# 
_chem_comp.id                                    LD6 
_chem_comp.name                                  "N-(6-Amino-1-(3-fluorobenzyl)-2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-N-methylbenzenesulfonamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H17 F N4 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-03-07 
_chem_comp.pdbx_modified_date                    2017-03-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        404.415 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     LD6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5FYE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
LD6 CAY  CAY  C 0 1 Y N N 20.951 26.771 59.099 -4.827 -0.435 -0.203 CAY  LD6 1  
LD6 CAZ  CAZ  C 0 1 Y N N 21.262 27.837 58.243 -5.597 -0.039 -1.283 CAZ  LD6 2  
LD6 FBB  FBB  F 0 1 N N N 21.828 28.772 58.768 -6.409 -0.928 -1.897 FBB  LD6 3  
LD6 CBA  CBA  C 0 1 Y N N 20.933 27.858 56.875 -5.534 1.268  -1.734 CBA  LD6 4  
LD6 CAX  CAX  C 0 1 Y N N 20.275 26.765 56.359 -4.703 2.177  -1.105 CAX  LD6 5  
LD6 CAW  CAW  C 0 1 Y N N 19.958 25.685 57.221 -3.935 1.780  -0.027 CAW  LD6 6  
LD6 CAV  CAV  C 0 1 Y N N 20.299 25.647 58.607 -3.997 0.474  0.425  CAV  LD6 7  
LD6 CAU  CAU  C 0 1 N N N 19.973 24.604 59.500 -3.160 0.043  1.601  CAU  LD6 8  
LD6 NAQ  NAQ  N 0 1 N N N 20.787 23.332 59.359 -1.862 -0.442 1.125  NAQ  LD6 9  
LD6 CAR  CAR  C 0 1 N N N 21.933 23.010 60.101 -0.811 0.437  0.991  CAR  LD6 10 
LD6 NAS  NAS  N 0 1 N N N 22.472 23.834 61.046 -0.973 1.768  1.302  NAS  LD6 11 
LD6 CAP  CAP  C 0 1 N N N 20.327 22.488 58.455 -1.703 -1.744 0.827  CAP  LD6 12 
LD6 OAO  OAO  O 0 1 N N N 19.321 22.825 57.881 -2.641 -2.507 0.957  OAO  LD6 13 
LD6 NAG  NAG  N 0 1 N N N 20.932 21.264 58.152 -0.522 -2.216 0.388  NAG  LD6 14 
LD6 CAH  CAH  C 0 1 N N N 22.110 20.889 58.876 0.533  -1.391 0.236  CAH  LD6 15 
LD6 OAA  OAA  O 0 1 N N N 22.658 19.803 58.635 1.600  -1.827 -0.163 OAA  LD6 16 
LD6 CAI  CAI  C 0 1 N N N 22.621 21.785 59.846 0.398  -0.026 0.545  CAI  LD6 17 
LD6 NAJ  NAJ  N 0 1 N N N 23.749 21.412 60.524 1.494  0.855  0.399  NAJ  LD6 18 
LD6 CAB  CAB  C 0 1 N N N 23.614 20.452 61.642 1.321  2.128  -0.306 CAB  LD6 19 
LD6 SAK  SAK  S 0 1 N N N 25.319 21.949 59.970 2.973  0.448  1.023  SAK  LD6 20 
LD6 OAT  OAT  O 0 1 N N N 25.223 23.428 59.752 3.476  1.616  1.656  OAT  LD6 21 
LD6 OAC  OAC  O 0 1 N N N 26.480 21.600 60.926 2.796  -0.788 1.700  OAC  LD6 22 
LD6 CAL  CAL  C 0 1 Y N N 25.608 21.170 58.347 4.042  0.121  -0.339 CAL  LD6 23 
LD6 CAM  CAM  C 0 1 Y N N 26.062 19.891 58.277 4.787  1.144  -0.894 CAM  LD6 24 
LD6 CAN  CAN  C 0 1 Y N N 26.296 19.328 57.056 5.626  0.888  -1.963 CAN  LD6 25 
LD6 CAF  CAF  C 0 1 Y N N 26.066 20.030 55.893 5.719  -0.393 -2.476 CAF  LD6 26 
LD6 CAE  CAE  C 0 1 Y N N 25.611 21.312 55.955 4.975  -1.416 -1.920 CAE  LD6 27 
LD6 CAD  CAD  C 0 1 Y N N 25.348 21.868 57.186 4.140  -1.160 -0.849 CAD  LD6 28 
LD6 HAY  HAY  H 0 1 N N N 21.219 26.824 60.144 -4.878 -1.454 0.153  HAY  LD6 29 
LD6 HBA  HBA  H 0 1 N N N 21.188 28.702 56.252 -6.134 1.578  -2.577 HBA  LD6 30 
LD6 HAX  HAX  H 0 1 N N N 20.004 26.731 55.314 -4.654 3.197  -1.457 HAX  LD6 31 
LD6 HAW  HAW  H 0 1 N N N 19.427 24.841 56.805 -3.286 2.490  0.464  HAW  LD6 32 
LD6 HAU1 HAU1 H 0 0 N N N 20.112 24.981 60.524 -3.008 0.891  2.269  HAU1 LD6 33 
LD6 HAU2 HAU2 H 0 0 N N N 18.915 24.346 59.345 -3.671 -0.755 2.138  HAU2 LD6 34 
LD6 HAS1 HAS1 H 0 0 N N N 23.281 23.401 61.444 -1.801 2.074  1.703  HAS1 LD6 35 
LD6 HAS2 HAS2 H 0 0 N N N 22.733 24.701 60.622 -0.260 2.399  1.119  HAS2 LD6 36 
LD6 HAG  HAG  H 0 1 N N N 20.552 20.665 57.447 -0.429 -3.158 0.178  HAG  LD6 37 
LD6 HAB1 HAB1 H 0 0 N N N 24.604 20.256 62.080 1.589  2.950  0.358  HAB1 LD6 38 
LD6 HAB2 HAB2 H 0 0 N N N 22.951 20.875 62.411 1.965  2.147  -1.185 HAB2 LD6 39 
LD6 HAB3 HAB3 H 0 0 N N N 23.187 19.510 61.267 0.281  2.234  -0.615 HAB3 LD6 40 
LD6 HAM  HAM  H 0 1 N N N 26.236 19.325 59.180 4.714  2.145  -0.493 HAM  LD6 41 
LD6 HAD  HAD  H 0 1 N N N 24.933 22.863 57.244 3.561  -1.961 -0.412 HAD  LD6 42 
LD6 HAN  HAN  H 0 1 N N N 26.668 18.315 57.000 6.207  1.687  -2.397 HAN  LD6 43 
LD6 HAF  HAF  H 0 1 N N N 26.246 19.565 54.935 6.374  -0.593 -3.311 HAF  LD6 44 
LD6 HAE  HAE  H 0 1 N N N 25.459 21.884 55.052 5.048  -2.416 -2.321 HAE  LD6 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
LD6 CAY CAZ  SING Y N 1  
LD6 CAY CAV  DOUB Y N 2  
LD6 CAZ FBB  SING N N 3  
LD6 CAZ CBA  DOUB Y N 4  
LD6 CBA CAX  SING Y N 5  
LD6 CAX CAW  DOUB Y N 6  
LD6 CAW CAV  SING Y N 7  
LD6 CAV CAU  SING N N 8  
LD6 CAU NAQ  SING N N 9  
LD6 NAQ CAR  SING N N 10 
LD6 NAQ CAP  SING N N 11 
LD6 CAR NAS  SING N N 12 
LD6 CAR CAI  DOUB N N 13 
LD6 CAP OAO  DOUB N N 14 
LD6 CAP NAG  SING N N 15 
LD6 NAG CAH  SING N N 16 
LD6 CAH OAA  DOUB N N 17 
LD6 CAH CAI  SING N N 18 
LD6 CAI NAJ  SING N N 19 
LD6 NAJ CAB  SING N N 20 
LD6 NAJ SAK  SING N N 21 
LD6 SAK OAT  DOUB N N 22 
LD6 SAK OAC  DOUB N N 23 
LD6 SAK CAL  SING N N 24 
LD6 CAL CAM  SING Y N 25 
LD6 CAL CAD  DOUB Y N 26 
LD6 CAM CAN  DOUB Y N 27 
LD6 CAN CAF  SING Y N 28 
LD6 CAF CAE  DOUB Y N 29 
LD6 CAE CAD  SING Y N 30 
LD6 CAY HAY  SING N N 31 
LD6 CBA HBA  SING N N 32 
LD6 CAX HAX  SING N N 33 
LD6 CAW HAW  SING N N 34 
LD6 CAU HAU1 SING N N 35 
LD6 CAU HAU2 SING N N 36 
LD6 NAS HAS1 SING N N 37 
LD6 NAS HAS2 SING N N 38 
LD6 NAG HAG  SING N N 39 
LD6 CAB HAB1 SING N N 40 
LD6 CAB HAB2 SING N N 41 
LD6 CAB HAB3 SING N N 42 
LD6 CAM HAM  SING N N 43 
LD6 CAD HAD  SING N N 44 
LD6 CAN HAN  SING N N 45 
LD6 CAF HAF  SING N N 46 
LD6 CAE HAE  SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
LD6 InChI            InChI                1.03  "InChI=1S/C18H17FN4O4S/c1-22(28(26,27)14-8-3-2-4-9-14)15-16(20)23(18(25)21-17(15)24)11-12-6-5-7-13(19)10-12/h2-10H,11,20H2,1H3,(H,21,24,25)" 
LD6 InChIKey         InChI                1.03  UTULDMQEJDMUBS-UHFFFAOYSA-N                                                                                                                  
LD6 SMILES_CANONICAL CACTVS               3.385 "CN(C1=C(N)N(Cc2cccc(F)c2)C(=O)NC1=O)[S](=O)(=O)c3ccccc3"                                                                                    
LD6 SMILES           CACTVS               3.385 "CN(C1=C(N)N(Cc2cccc(F)c2)C(=O)NC1=O)[S](=O)(=O)c3ccccc3"                                                                                    
LD6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CN(C1=C(N(C(=O)NC1=O)Cc2cccc(c2)F)N)S(=O)(=O)c3ccccc3"                                                                                      
LD6 SMILES           "OpenEye OEToolkits" 1.7.6 "CN(C1=C(N(C(=O)NC1=O)Cc2cccc(c2)F)N)S(=O)(=O)c3ccccc3"                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
LD6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[6-azanyl-1-[(3-fluorophenyl)methyl]-2,4-bis(oxidanylidene)pyrimidin-5-yl]-N-methyl-benzenesulfonamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
LD6 "Create component" 2016-03-07 EBI  
LD6 "Initial release"  2017-03-22 RCSB 
# 
