data_DL6
#

_chem_comp.id                                   DL6
_chem_comp.name                                 "N-(azidoacetyl)-beta-D-glucopyranosylamine"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H14 N4 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;2-AZIDO-N-((2R,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YL)ACETAMIDE;
N-AZIDOACETYL-BETA-D-GLUCOPYRANOSYLAMINE; N-(azidoacetyl)-beta-D-glucosylamine; N-(azidoacetyl)-D-glucosylamine;
N-(azidoacetyl)-glucosylamine
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2006-01-10
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       262.220
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DL6
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2FFR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  DL6  "2-AZIDO-N-((2R,3R,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YL)ACETAMIDE"  PDB  ?  
2  DL6  N-AZIDOACETYL-BETA-D-GLUCOPYRANOSYLAMINE                                                             PDB  ?  
3  DL6  "N-(azidoacetyl)-beta-D-glucosylamine"                                                               PDB  ?  
4  DL6  "N-(azidoacetyl)-D-glucosylamine"                                                                    PDB  ?  
5  DL6  "N-(azidoacetyl)-glucosylamine"                                                                      PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DL6  O6   O6   O   0  1  N  N  N  33.355  18.645  27.258  -1.306   3.540  -0.093  O6   DL6   1  
DL6  C6   C6   C   0  1  N  N  N  32.236  19.374  27.818  -2.325   2.624   0.314  C6   DL6   2  
DL6  C5   C5   C   0  1  N  N  R  32.426  20.883  27.481  -1.942   1.208  -0.122  C5   DL6   3  
DL6  C4   C4   C   0  1  N  N  S  32.494  21.089  25.873  -3.090   0.249   0.199  C4   DL6   4  
DL6  O4   O4   O   0  1  N  N  N  31.307  20.651  25.217  -4.275   0.678  -0.475  O4   DL6   5  
DL6  C3   C3   C   0  1  N  N  S  32.710  22.612  25.553  -2.712  -1.159  -0.274  C3   DL6   6  
DL6  O3   O3   O   0  1  N  N  N  32.793  22.839  24.124  -3.706  -2.094   0.150  O3   DL6   7  
DL6  C2   C2   C   0  1  N  N  R  34.012  23.023  26.235  -1.358  -1.534   0.340  C2   DL6   8  
DL6  O2   O2   O   0  1  N  N  N  34.225  24.440  26.000  -0.914  -2.780  -0.201  O2   DL6   9  
DL6  C1   C1   C   0  1  N  N  R  33.971  22.746  27.756  -0.340  -0.440   0.010  C1   DL6  10  
DL6  N1   N1   N   0  1  N  N  N  35.335  23.080  28.234   0.965  -0.806   0.566  N1   DL6  11  
DL6  C7   C7   C   0  1  N  N  N  35.564  23.791  29.326   2.094  -0.487  -0.097  C7   DL6  12  
DL6  C8   C8   C   0  1  N  N  N  37.018  24.085  29.724   3.436  -0.864   0.475  C8   DL6  13  
DL6  N2   N2   N   0  1  N  N  N  37.139  24.865  30.919   4.496  -0.409  -0.427  N2   DL6  14  
DL6  N3   N3   N   1  1  N  N  N  37.732  24.438  31.839   5.271   0.320  -0.063  N3   DL6  15  
DL6  N4   N4   N  -1  1  N  N  N  38.325  24.006  32.755   6.045   1.048   0.302  N4   DL6  16  
DL6  O7   O7   O   0  1  N  N  N  34.686  24.219  30.013   2.029   0.103  -1.155  O7   DL6  17  
DL6  O5   O5   O   0  1  N  N  N  33.715  21.343  28.015  -0.764   0.800   0.572  O5   DL6  18  
DL6  HO6  HO6  H   0  1  N  Y  N  33.199  18.485  26.335  -1.586   4.417   0.201  HO6  DL6  19  
DL6  H61  H61  H   0  1  N  N  N  32.194  19.229  28.908  -2.429   2.654   1.399  H61  DL6  20  
DL6  H62  H62  H   0  1  N  N  N  31.294  19.008  27.383  -3.271   2.904  -0.149  H62  DL6  21  
DL6  H5   H5   H   0  1  N  N  N  31.584  21.441  27.915  -1.752   1.199  -1.195  H5   DL6  22  
DL6  H4   H4   H   0  1  N  N  N  33.332  20.481  25.501  -3.267   0.237   1.275  H4   DL6  23  
DL6  HO4  HO4  H   0  1  N  Y  N  30.610  20.554  25.855  -4.969   0.043  -0.252  HO4  DL6  24  
DL6  H3   H3   H   0  1  N  N  N  31.862  23.208  25.921  -2.636  -1.173  -1.361  H3   DL6  25  
DL6  HO3  HO3  H   0  1  N  Y  N  32.811  23.773  23.952  -3.420  -2.965  -0.158  HO3  DL6  26  
DL6  H2   H2   H   0  1  N  N  N  34.837  22.430  25.813  -1.460  -1.622   1.422  H2   DL6  27  
DL6  HO2  HO2  H   0  1  N  Y  N  34.272  24.896  26.832  -0.058  -2.973   0.207  HO2  DL6  28  
DL6  H1   H1   H   0  1  N  N  N  33.179  23.326  28.253  -0.257  -0.338  -1.072  H1   DL6  29  
DL6  HN1  HN1  H   0  1  N  N  N  36.118  22.752  27.706   1.016  -1.278   1.412  HN1  DL6  30  
DL6  H81  H81  H   0  1  N  N  N  37.466  24.670  28.907   3.561  -0.391   1.449  H81  DL6  31  
DL6  H82  H82  H   0  1  N  N  N  37.528  23.125  29.889   3.493  -1.946   0.586  H82  DL6  32  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DL6  O6  C6   SING  N  N   1  
DL6  O6  HO6  SING  N  N   2  
DL6  C6  C5   SING  N  N   3  
DL6  C6  H61  SING  N  N   4  
DL6  C6  H62  SING  N  N   5  
DL6  C5  C4   SING  N  N   6  
DL6  C5  O5   SING  N  N   7  
DL6  C5  H5   SING  N  N   8  
DL6  C4  O4   SING  N  N   9  
DL6  C4  C3   SING  N  N  10  
DL6  C4  H4   SING  N  N  11  
DL6  O4  HO4  SING  N  N  12  
DL6  C3  O3   SING  N  N  13  
DL6  C3  C2   SING  N  N  14  
DL6  C3  H3   SING  N  N  15  
DL6  O3  HO3  SING  N  N  16  
DL6  C2  O2   SING  N  N  17  
DL6  C2  C1   SING  N  N  18  
DL6  C2  H2   SING  N  N  19  
DL6  O2  HO2  SING  N  N  20  
DL6  C1  N1   SING  N  N  21  
DL6  C1  O5   SING  N  N  22  
DL6  C1  H1   SING  N  N  23  
DL6  N1  C7   SING  N  N  24  
DL6  N1  HN1  SING  N  N  25  
DL6  C7  C8   SING  N  N  26  
DL6  C7  O7   DOUB  N  N  27  
DL6  C8  N2   SING  N  N  28  
DL6  C8  H81  SING  N  N  29  
DL6  C8  H82  SING  N  N  30  
DL6  N2  N3   DOUB  N  N  31  
DL6  N3  N4   DOUB  N  N  32  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DL6  SMILES            ACDLabs               10.04  "O=C(NC1OC(C(O)C(O)C1O)CO)C/N=[N+]=[N-]"  
DL6  SMILES_CANONICAL  CACTVS                3.341  "OC[C@H]1O[C@@H](NC(=O)CN=[N+]=[N-])[C@H](O)[C@@H](O)[C@@H]1O"  
DL6  SMILES            CACTVS                3.341  "OC[CH]1O[CH](NC(=O)CN=[N+]=[N-])[CH](O)[CH](O)[CH]1O"  
DL6  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)NC(=O)CN=[N+]=[N-])O)O)O)O"  
DL6  SMILES            "OpenEye OEToolkits"  1.5.0  "C(C1C(C(C(C(O1)NC(=O)CN=[N+]=[N-])O)O)O)O"  
DL6  InChI             InChI                 1.03   "InChI=1S/C8H14N4O6/c9-12-10-1-4(14)11-8-7(17)6(16)5(15)3(2-13)18-8/h3,5-8,13,15-17H,1-2H2,(H,11,14)/t3-,5-,6+,7-,8-/m1/s1"  
DL6  InChIKey          InChI                 1.03   ACLUEOOMMLAETN-RHROMQPHSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DL6  "SYSTEMATIC NAME"  ACDLabs               10.04  "N-(azidoacetyl)-beta-D-glucopyranosylamine"  
DL6  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "2-azido-N-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
DL6  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
DL6  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
DL6  "CARBOHYDRATE ANOMER"                  beta      PDB  ?  
DL6  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DL6  "Create component"          2006-01-10  RCSB  
DL6  "Modify descriptor"         2011-06-04  RCSB  
DL6  "Other modification"        2020-07-03  RCSB  
DL6  "Modify name"               2020-07-17  RCSB  
DL6  "Modify synonyms"           2020-07-17  RCSB  
DL6  "Modify internal type"      2020-07-17  RCSB  
DL6  "Modify linking type"       2020-07-17  RCSB  
DL6  "Modify leaving atom flag"  2020-07-17  RCSB  
##
