data_2S6
# 
_chem_comp.id                                    2S6 
_chem_comp.name                                  "4-(3-{4-[(R)-cyclopentyl(hydroxy)phenylmethyl]piperidin-1-yl}propoxy)benzonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H34 N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-01-17 
_chem_comp.pdbx_modified_date                    2014-02-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        418.571 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     2S6 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4OG3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
2S6 CAK CAK C 0 1 Y N N -10.709 19.253 -13.378 -6.997  1.318  -0.862 CAK 2S6 1  
2S6 CAI CAI C 0 1 Y N N -10.145 20.416 -13.874 -8.338  1.209  -0.570 CAI 2S6 2  
2S6 CAY CAY C 0 1 Y N N -8.774  20.546 -13.956 -8.792  0.170  0.247  CAY 2S6 3  
2S6 CAC CAC C 0 1 N N N -8.200  21.737 -14.473 -10.186 0.052  0.552  CAC 2S6 4  
2S6 NAA NAA N 0 1 N N N -7.771  22.705 -14.905 -11.292 -0.040 0.795  NAA 2S6 5  
2S6 CAJ CAJ C 0 1 Y N N -7.982  19.487 -13.526 -7.881  -0.755 0.764  CAJ 2S6 6  
2S6 CAL CAL C 0 1 Y N N -8.536  18.294 -13.046 -6.541  -0.639 0.468  CAL 2S6 7  
2S6 CAZ CAZ C 0 1 Y N N -9.914  18.172 -12.988 -6.094  0.396  -0.345 CAZ 2S6 8  
2S6 OAX OAX O 0 1 N N N -10.543 17.040 -12.546 -4.773  0.503  -0.640 OAX 2S6 9  
2S6 CAP CAP C 0 1 N N N -9.797  15.874 -12.164 -3.901  -0.478 -0.075 CAP 2S6 10 
2S6 CAO CAO C 0 1 N N N -10.745 15.002 -11.290 -2.463  -0.195 -0.516 CAO 2S6 11 
2S6 CAU CAU C 0 1 N N N -11.608 14.287 -12.292 -1.529  -1.246 0.089  CAU 2S6 12 
2S6 NBD NBD N 0 1 N N N -12.754 13.540 -11.653 -0.148  -0.974 -0.334 NBD 2S6 13 
2S6 CAW CAW C 0 1 N N N -13.454 12.705 -12.623 0.334   0.294  0.227  CAW 2S6 14 
2S6 CAT CAT C 0 1 N N N -14.631 11.958 -12.029 1.715   0.615  -0.348 CAT 2S6 15 
2S6 CAV CAV C 0 1 N N N -12.140 12.496 -10.716 0.740   -2.087 0.026  CAV 2S6 16 
2S6 CAS CAS C 0 1 N N N -13.229 11.722 -9.895  2.134   -1.836 -0.555 CAS 2S6 17 
2S6 CBC CBC C 0 1 N N N -14.119 10.985 -10.979 2.684   -0.519 -0.001 CBC 2S6 18 
2S6 CBE CBE C 0 1 N N R -15.242 10.057 -10.405 4.051   -0.233 -0.626 CBE 2S6 19 
2S6 CBB CBB C 0 1 N N N -14.606 9.085  -9.378  5.017   -1.367 -0.278 CBB 2S6 20 
2S6 CAQ CAQ C 0 1 N N N -13.507 8.107  -9.894  5.201   -1.481 1.255  CAQ 2S6 21 
2S6 CAM CAM C 0 1 N N N -13.287 7.289  -8.597  6.571   -2.171 1.422  CAM 2S6 22 
2S6 CAN CAN C 0 1 N N N -14.698 7.232  -7.884  7.365   -1.889 0.134  CAN 2S6 23 
2S6 CAR CAR C 0 1 N N N -15.639 8.085  -8.667  6.449   -1.038 -0.771 CAR 2S6 24 
2S6 OAB OAB O 0 1 N N N -16.159 10.896 -9.732  3.916   -0.140 -2.045 OAB 2S6 25 
2S6 CBA CBA C 0 1 Y N N -15.923 9.306  -11.422 4.587   1.067  -0.085 CBA 2S6 26 
2S6 CAG CAG C 0 1 Y N N -17.309 9.166  -11.400 4.327   1.433  1.222  CAG 2S6 27 
2S6 CAE CAE C 0 1 Y N N -17.981 8.419  -12.370 4.819   2.626  1.718  CAE 2S6 28 
2S6 CAD CAD C 0 1 Y N N -17.243 7.844  -13.417 5.571   3.454  0.906  CAD 2S6 29 
2S6 CAF CAF C 0 1 Y N N -15.877 7.964  -13.468 5.831   3.089  -0.402 CAF 2S6 30 
2S6 CAH CAH C 0 1 Y N N -15.238 8.722  -12.504 5.344   1.893  -0.896 CAH 2S6 31 
2S6 H1  H1  H 0 1 N N N -11.783 19.180 -13.291 -6.646  2.118  -1.497 H1  2S6 32 
2S6 H2  H2  H 0 1 N N N -10.782 21.226 -14.198 -9.039  1.926  -0.972 H2  2S6 33 
2S6 H3  H3  H 0 1 N N N -6.907  19.588 -13.563 -8.227  -1.560 1.396  H3  2S6 34 
2S6 H4  H4  H 0 1 N N N -7.899  17.482 -12.726 -5.836  -1.354 0.867  H4  2S6 35 
2S6 H5  H5  H 0 1 N N N -9.484  15.314 -13.058 -3.963  -0.437 1.012  H5  2S6 36 
2S6 H6  H6  H 0 1 N N N -8.909  16.166 -11.585 -4.198  -1.469 -0.419 H6  2S6 37 
2S6 H7  H7  H 0 1 N N N -11.356 15.632 -10.627 -2.401  -0.236 -1.603 H7  2S6 38 
2S6 H8  H8  H 0 1 N N N -10.170 14.284 -10.686 -2.166  0.796  -0.172 H8  2S6 39 
2S6 H9  H9  H 0 1 N N N -10.984 13.568 -12.843 -1.591  -1.205 1.176  H9  2S6 40 
2S6 H10 H10 H 0 1 N N N -12.019 15.028 -12.993 -1.826  -2.237 -0.255 H10 2S6 41 
2S6 H12 H12 H 0 1 N N N -12.743 11.971 -13.030 -0.361  1.093  -0.030 H12 2S6 42 
2S6 H13 H13 H 0 1 N N N -13.822 13.348 -13.436 0.403   0.208  1.311  H13 2S6 43 
2S6 H14 H14 H 0 1 N N N -15.325 12.673 -11.563 1.644   0.715  -1.431 H14 2S6 44 
2S6 H15 H15 H 0 1 N N N -15.154 11.404 -12.822 2.080   1.549  0.080  H15 2S6 45 
2S6 H16 H16 H 0 1 N N N -11.569 11.773 -11.317 0.808   -2.161 1.111  H16 2S6 46 
2S6 H17 H17 H 0 1 N N N -11.463 13.005 -10.014 0.340   -3.017 -0.378 H17 2S6 47 
2S6 H18 H18 H 0 1 N N N -13.839 12.423 -9.306  2.797   -2.654 -0.275 H18 2S6 48 
2S6 H19 H19 H 0 1 N N N -12.758 10.991 -9.221  2.069   -1.776 -1.642 H19 2S6 49 
2S6 H20 H20 H 0 1 N N N -13.428 10.312 -11.507 2.786   -0.593 1.081  H20 2S6 50 
2S6 H21 H21 H 0 1 N N N -14.154 9.695  -8.582  4.671   -2.311 -0.700 H21 2S6 51 
2S6 H22 H22 H 0 1 N N N -13.868 7.479  -10.722 5.214   -0.492 1.713  H22 2S6 52 
2S6 H23 H23 H 0 1 N N N -12.596 8.638  -10.207 4.411   -2.093 1.690  H23 2S6 53 
2S6 H24 H24 H 0 1 N N N -12.938 6.274  -8.838  7.096   -1.755 2.282  H24 2S6 54 
2S6 H25 H25 H 0 1 N N N -12.550 7.787  -7.950  6.436   -3.244 1.550  H25 2S6 55 
2S6 H26 H26 H 0 1 N N N -14.614 7.614  -6.856  8.274   -1.337 0.369  H26 2S6 56 
2S6 H27 H27 H 0 1 N N N -15.064 6.195  -7.861  7.615   -2.826 -0.363 H27 2S6 57 
2S6 H28 H28 H 0 1 N N N -16.340 8.623  -8.012  6.569   -1.327 -1.815 H28 2S6 58 
2S6 H29 H29 H 0 1 N N N -16.205 7.495  -9.403  6.663   0.022  -0.640 H29 2S6 59 
2S6 H30 H30 H 0 1 N N N -15.703 11.390 -9.061  3.317   0.560  -2.338 H30 2S6 60 
2S6 H31 H31 H 0 1 N N N -17.876 9.646  -10.616 3.740   0.786  1.857  H31 2S6 61 
2S6 H32 H32 H 0 1 N N N -19.051 8.286  -12.316 4.616   2.911  2.740  H32 2S6 62 
2S6 H33 H33 H 0 1 N N N -17.758 7.299  -14.194 5.955   4.386  1.293  H33 2S6 63 
2S6 H34 H34 H 0 1 N N N -15.311 7.475  -14.247 6.418   3.736  -1.037 H34 2S6 64 
2S6 H35 H35 H 0 1 N N N -14.171 8.872  -12.585 5.548   1.608  -1.917 H35 2S6 65 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
2S6 NAA CAC TRIP N N 1  
2S6 CAC CAY SING N N 2  
2S6 CAY CAI DOUB Y N 3  
2S6 CAY CAJ SING Y N 4  
2S6 CAI CAK SING Y N 5  
2S6 CAJ CAL DOUB Y N 6  
2S6 CAF CAD DOUB Y N 7  
2S6 CAF CAH SING Y N 8  
2S6 CAD CAE SING Y N 9  
2S6 CAK CAZ DOUB Y N 10 
2S6 CAL CAZ SING Y N 11 
2S6 CAZ OAX SING N N 12 
2S6 CAW CAT SING N N 13 
2S6 CAW NBD SING N N 14 
2S6 OAX CAP SING N N 15 
2S6 CAH CBA DOUB Y N 16 
2S6 CAE CAG DOUB Y N 17 
2S6 CAU NBD SING N N 18 
2S6 CAU CAO SING N N 19 
2S6 CAP CAO SING N N 20 
2S6 CAT CBC SING N N 21 
2S6 NBD CAV SING N N 22 
2S6 CBA CAG SING Y N 23 
2S6 CBA CBE SING N N 24 
2S6 CBC CBE SING N N 25 
2S6 CBC CAS SING N N 26 
2S6 CAV CAS SING N N 27 
2S6 CBE OAB SING N N 28 
2S6 CBE CBB SING N N 29 
2S6 CAQ CBB SING N N 30 
2S6 CAQ CAM SING N N 31 
2S6 CBB CAR SING N N 32 
2S6 CAR CAN SING N N 33 
2S6 CAM CAN SING N N 34 
2S6 CAK H1  SING N N 35 
2S6 CAI H2  SING N N 36 
2S6 CAJ H3  SING N N 37 
2S6 CAL H4  SING N N 38 
2S6 CAP H5  SING N N 39 
2S6 CAP H6  SING N N 40 
2S6 CAO H7  SING N N 41 
2S6 CAO H8  SING N N 42 
2S6 CAU H9  SING N N 43 
2S6 CAU H10 SING N N 44 
2S6 CAW H12 SING N N 45 
2S6 CAW H13 SING N N 46 
2S6 CAT H14 SING N N 47 
2S6 CAT H15 SING N N 48 
2S6 CAV H16 SING N N 49 
2S6 CAV H17 SING N N 50 
2S6 CAS H18 SING N N 51 
2S6 CAS H19 SING N N 52 
2S6 CBC H20 SING N N 53 
2S6 CBB H21 SING N N 54 
2S6 CAQ H22 SING N N 55 
2S6 CAQ H23 SING N N 56 
2S6 CAM H24 SING N N 57 
2S6 CAM H25 SING N N 58 
2S6 CAN H26 SING N N 59 
2S6 CAN H27 SING N N 60 
2S6 CAR H28 SING N N 61 
2S6 CAR H29 SING N N 62 
2S6 OAB H30 SING N N 63 
2S6 CAG H31 SING N N 64 
2S6 CAE H32 SING N N 65 
2S6 CAD H33 SING N N 66 
2S6 CAF H34 SING N N 67 
2S6 CAH H35 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
2S6 SMILES           ACDLabs              12.01 "N#Cc4ccc(OCCCN1CCC(CC1)C(O)(c2ccccc2)C3CCCC3)cc4"                                                                                                                          
2S6 InChI            InChI                1.03  "InChI=1S/C27H34N2O2/c28-21-22-11-13-26(14-12-22)31-20-6-17-29-18-15-25(16-19-29)27(30,24-9-4-5-10-24)23-7-2-1-3-8-23/h1-3,7-8,11-14,24-25,30H,4-6,9-10,15-20H2/t27-/m1/s1" 
2S6 InChIKey         InChI                1.03  QBITUTDDFZQXDO-HHHXNRCGSA-N                                                                                                                                                 
2S6 SMILES_CANONICAL CACTVS               3.385 "O[C@](C1CCCC1)(C2CCN(CCCOc3ccc(cc3)C#N)CC2)c4ccccc4"                                                                                                                       
2S6 SMILES           CACTVS               3.385 "O[C](C1CCCC1)(C2CCN(CCCOc3ccc(cc3)C#N)CC2)c4ccccc4"                                                                                                                        
2S6 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)[C@@](C2CCCC2)(C3CCN(CC3)CCCOc4ccc(cc4)C#N)O"                                                                                                                    
2S6 SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C(C2CCCC2)(C3CCN(CC3)CCCOc4ccc(cc4)C#N)O"                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
2S6 "SYSTEMATIC NAME" ACDLabs              12.01 "4-(3-{4-[(R)-cyclopentyl(hydroxy)phenylmethyl]piperidin-1-yl}propoxy)benzonitrile"          
2S6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[3-[4-[(R)-cyclopentyl-oxidanyl-phenyl-methyl]piperidin-1-yl]propoxy]benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
2S6 "Create component" 2014-01-17 RCSB 
2S6 "Initial release"  2014-03-05 RCSB 
# 
