data_T65
# 
_chem_comp.id                                    T65 
_chem_comp.name                                  "2-[E-(E-2-oxidanylidenehexadec-5-enylidene)amino]ethanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H31 N O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-12-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        309.444 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     T65 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5WQX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
T65 O2  O1  O 0 1 N N N N N N 21.082 21.146 20.643 -9.564  -2.468 0.598  O2  T65 1  
T65 C17 C1  C 0 1 N N N N N N 20.545 20.181 19.997 -8.645  -1.541 0.286  C17 T65 2  
T65 O1  O2  O 0 1 N N N N N N 20.148 19.088 20.516 -8.810  -0.391 0.620  O1  T65 3  
T65 C16 C2  C 0 1 N N N N N N 20.348 20.307 18.511 -7.408  -1.932 -0.480 C16 T65 4  
T65 N   N1  N 0 1 N N N N N N 19.951 18.962 18.135 -6.570  -0.749 -0.693 N   T65 5  
T65 C15 C3  C 0 1 N N N N N N 20.345 18.400 17.067 -5.404  -0.678 -0.145 C15 T65 6  
T65 C14 C4  C 0 1 N N N N N N 19.907 17.006 16.744 -4.560  0.515  -0.360 C14 T65 7  
T65 O   O3  O 0 1 N N N N N N 19.249 16.331 17.543 -4.961  1.423  -1.049 O   T65 8  
T65 C13 C5  C 0 1 N N N N N N 20.256 16.449 15.372 -3.198  0.599  0.279  C13 T65 9  
T65 C12 C6  C 0 1 N N N N N N 20.017 17.577 14.352 -2.537  1.926  -0.100 C12 T65 10 
T65 C11 C7  C 0 1 N N N N N N 19.701 17.126 12.938 -1.175  2.010  0.540  C11 T65 11 
T65 C10 C8  C 0 1 N N N N N N 18.467 16.810 12.521 -0.117  2.231  -0.200 C10 T65 12 
T65 C9  C9  C 0 1 N N N N N N 18.317 16.367 11.081 1.245   2.315  0.440  C9  T65 13 
T65 C8  C10 C 0 1 N N N N N N 17.434 17.333 10.295 2.187   1.314  -0.233 C8  T65 14 
T65 C7  C11 C 0 1 N N N N N N 18.199 17.868 9.082  3.570   1.399  0.417  C7  T65 15 
T65 C   C12 C 0 1 N N N N N N 19.177 19.012 9.403  4.511   0.398  -0.255 C   T65 16 
T65 C1  C13 C 0 1 N N N N N N 18.462 20.324 9.780  5.894   0.483  0.394  C1  T65 17 
T65 C2  C14 C 0 1 N N N N N N 17.787 21.078 8.632  6.836   -0.518 -0.278 C2  T65 18 
T65 C3  C15 C 0 1 N N N N N N 16.569 21.871 9.099  8.219   -0.433 0.371  C3  T65 19 
T65 C4  C16 C 0 1 N N N N N N 15.432 20.916 9.470  9.160   -1.434 -0.301 C4  T65 20 
T65 C5  C17 C 0 1 N N N N N N 14.054 21.383 8.999  10.543  -1.349 0.348  C5  T65 21 
T65 C6  C18 C 0 1 N N N N N N 12.955 20.563 9.658  11.485  -2.350 -0.324 C6  T65 22 
T65 H1  H1  H 0 1 N N N N N N 21.137 20.919 21.564 -10.341 -2.169 1.090  H1  T65 23 
T65 H2  H2  H 0 1 N N N N N N 21.282 20.602 18.009 -6.849  -2.676 0.088  H2  T65 24 
T65 H3  H3  H 0 1 N N N N N N 19.559 21.036 18.274 -7.695  -2.352 -1.444 H3  T65 25 
T65 H4  H4  H 0 1 N N N N N N 20.998 18.930 16.389 -5.046  -1.490 0.470  H4  T65 26 
T65 H5  H5  H 0 1 N N N N N N 19.613 15.587 15.140 -3.301  0.541  1.363  H5  T65 27 
T65 H6  H6  H 0 1 N N N N N N 21.310 16.136 15.349 -2.580  -0.227 -0.072 H6  T65 28 
T65 H7  H7  H 0 1 N N N N N N 20.925 18.197 14.315 -2.434  1.984  -1.183 H7  T65 29 
T65 H8  H8  H 0 1 N N N N N N 19.173 18.184 14.710 -3.155  2.753  0.251  H8  T65 30 
T65 H9  H9  H 0 1 N N N N N N 20.514 17.056 12.230 -1.072  1.888  1.608  H9  T65 31 
T65 H10 H10 H 0 1 N N N N N N 17.616 16.869 13.184 -0.220  2.353  -1.268 H10 T65 32 
T65 H11 H11 H 0 1 N N N N N N 17.862 15.366 11.059 1.641   3.323  0.320  H11 T65 33 
T65 H12 H12 H 0 1 N N N N N N 19.311 16.328 10.612 1.163   2.081  1.501  H12 T65 34 
T65 H13 H13 H 0 1 N N N N N N 17.145 18.173 10.944 1.791   0.306  -0.113 H13 T65 35 
T65 H14 H14 H 0 1 N N N N N N 16.531 16.806 9.953  2.269   1.548  -1.294 H14 T65 36 
T65 H15 H15 H 0 1 N N N N N N 17.467 18.237 8.348  3.966   2.408  0.297  H15 T65 37 
T65 H16 H16 H 0 1 N N N N N N 18.772 17.038 8.643  3.488   1.165  1.478  H16 T65 38 
T65 H17 H17 H 0 1 N N N N N N 19.813 18.704 10.246 4.115   -0.610 -0.135 H17 T65 39 
T65 H18 H18 H 0 1 N N N N N N 19.805 19.196 8.518  4.593   0.632  -1.317 H18 T65 40 
T65 H19 H19 H 0 1 N N N N N N 19.208 20.996 10.230 6.290   1.492  0.274  H19 T65 41 
T65 H20 H20 H 0 1 N N N N N N 17.689 20.083 10.524 5.812   0.249  1.455  H20 T65 42 
T65 H21 H21 H 0 1 N N N N N N 17.466 20.351 7.871  6.440   -1.526 -0.158 H21 T65 43 
T65 H22 H22 H 0 1 N N N N N N 18.515 21.774 8.190  6.918   -0.283 -1.340 H22 T65 44 
T65 H23 H23 H 0 1 N N N N N N 16.841 22.472 9.979  8.615   0.576  0.251  H23 T65 45 
T65 H24 H24 H 0 1 N N N N N N 16.236 22.537 8.289  8.137   -0.667 1.432  H24 T65 46 
T65 H25 H25 H 0 1 N N N N N N 15.408 20.814 10.565 8.764   -2.442 -0.181 H25 T65 47 
T65 H26 H26 H 0 1 N N N N N N 15.640 19.936 9.015  9.242   -1.199 -1.362 H26 T65 48 
T65 H27 H27 H 0 1 N N N N N N 13.922 22.443 9.263  10.939  -0.340 0.228  H27 T65 49 
T65 H28 H28 H 0 1 N N N N N N 13.987 21.266 7.907  10.461  -1.583 1.410  H28 T65 50 
T65 H29 H29 H 0 1 N N N N N N 11.974 20.914 9.306  11.088  -3.358 -0.204 H29 T65 51 
T65 H30 H30 H 0 1 N N N N N N 13.081 19.503 9.394  11.566  -2.115 -1.385 H30 T65 52 
T65 H31 H31 H 0 1 N N N N N N 13.016 20.679 10.750 12.470  -2.289 0.139  H31 T65 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
T65 C2  C3  SING N N 1  
T65 C2  C1  SING N N 2  
T65 C5  C4  SING N N 3  
T65 C5  C6  SING N N 4  
T65 C7  C   SING N N 5  
T65 C7  C8  SING N N 6  
T65 C3  C4  SING N N 7  
T65 C   C1  SING N N 8  
T65 C8  C9  SING N N 9  
T65 C9  C10 SING N N 10 
T65 C10 C11 DOUB N E 11 
T65 C11 C12 SING N N 12 
T65 C12 C13 SING N N 13 
T65 C13 C14 SING N N 14 
T65 C14 C15 SING N N 15 
T65 C14 O   DOUB N N 16 
T65 C15 N   DOUB N N 17 
T65 N   C16 SING N N 18 
T65 C16 C17 SING N N 19 
T65 C17 O1  DOUB N N 20 
T65 C17 O2  SING N N 21 
T65 O2  H1  SING N N 22 
T65 C16 H2  SING N N 23 
T65 C16 H3  SING N N 24 
T65 C15 H4  SING N N 25 
T65 C13 H5  SING N N 26 
T65 C13 H6  SING N N 27 
T65 C12 H7  SING N N 28 
T65 C12 H8  SING N N 29 
T65 C11 H9  SING N N 30 
T65 C10 H10 SING N N 31 
T65 C9  H11 SING N N 32 
T65 C9  H12 SING N N 33 
T65 C8  H13 SING N N 34 
T65 C8  H14 SING N N 35 
T65 C7  H15 SING N N 36 
T65 C7  H16 SING N N 37 
T65 C   H17 SING N N 38 
T65 C   H18 SING N N 39 
T65 C1  H19 SING N N 40 
T65 C1  H20 SING N N 41 
T65 C2  H21 SING N N 42 
T65 C2  H22 SING N N 43 
T65 C3  H23 SING N N 44 
T65 C3  H24 SING N N 45 
T65 C4  H25 SING N N 46 
T65 C4  H26 SING N N 47 
T65 C5  H27 SING N N 48 
T65 C5  H28 SING N N 49 
T65 C6  H29 SING N N 50 
T65 C6  H30 SING N N 51 
T65 C6  H31 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
T65 InChI            InChI                1.03  "InChI=1S/C18H31NO3/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-17(20)15-19-16-18(21)22/h11-12,15H,2-10,13-14,16H2,1H3,(H,21,22)/b12-11+,19-15+" 
T65 InChIKey         InChI                1.03  YSSZBWQPDXCJEP-IHFZGXTKSA-N                                                                                                            
T65 SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCCC\C=C\CCC(=O)C=NCC(O)=O"                                                                                                     
T65 SMILES           CACTVS               3.385 "CCCCCCCCCCC=CCCC(=O)C=NCC(O)=O"                                                                                                       
T65 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCC/C=C/CCC(=O)/C=N/CC(=O)O"                                                                                                   
T65 SMILES           "OpenEye OEToolkits" 2.0.6 "CCCCCCCCCCC=CCCC(=O)C=NCC(=O)O"                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           T65 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "2-[(~{E})-[(~{E})-2-oxidanylidenehexadec-5-enylidene]amino]ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
T65 "Create component" 2016-12-01 RCSB 
T65 "Initial release"  2017-11-22 RCSB 
T65 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            T65 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           Lipid/lipid-like 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C12 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
