data_P25
# 
_chem_comp.id                                    P25 
_chem_comp.name                                  "PENTYL TRIHYDROGEN DIPHOSPHATE" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H14 O7 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2004-07-01 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        248.108 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     P25 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1T9B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
P25 C4   C4   C 0 1 N N N 0.008  52.527 121.321 5.735  0.272  0.445  C4   P25 1  
P25 CM4  CM4  C 0 1 N N N -1.428 52.286 120.741 6.896  0.125  -0.539 CM4  P25 2  
P25 C5   C5   C 0 1 N N N 0.795  53.799 120.965 4.413  0.022  -0.284 C5   P25 3  
P25 C6   C6   C 0 1 N N N 2.202  54.169 121.454 3.251  0.169  0.701  C6   P25 4  
P25 C7   C7   C 0 1 N N N 3.059  55.281 120.984 1.930  -0.082 -0.029 C7   P25 5  
P25 O7   O7   O 0 1 N N N 4.176  56.164 120.862 0.845  0.056  0.891  O7   P25 6  
P25 PA   PA   P 0 1 N N R 5.026  56.133 119.679 -0.507 -0.219 0.061  PA   P25 7  
P25 O1A  O1A  O 0 1 N N N 6.026  57.105 119.836 -0.561 0.688  -1.108 O1A  P25 8  
P25 O2A  O2A  O 0 1 N N N 5.707  54.900 119.507 -0.524 -1.748 -0.446 O2A  P25 9  
P25 O3A  O3A  O 0 1 N N N 4.179  56.495 118.408 -1.782 0.047  1.007  O3A  P25 10 
P25 PB   PB   P 0 1 N N N 3.239  57.694 118.002 -3.065 0.149  0.040  PB   P25 11 
P25 O1B  O1B  O 0 1 N N N 1.926  57.324 118.382 -3.021 -0.944 -0.956 O1B  P25 12 
P25 O2B  O2B  O 0 1 N N N 3.482  57.821 116.580 -4.409 0.021  0.918  O2B  P25 13 
P25 O3B  O3B  O 0 1 N N N 3.847  58.846 118.775 -3.054 1.569  -0.720 O3B  P25 14 
P25 H41  1H4  H 0 1 N N N 0.639  51.644 121.066 5.848  -0.453 1.251  H41  P25 15 
P25 H42  2H4  H 0 1 N N N -0.048 52.452 122.432 5.735  1.280  0.861  H42  P25 16 
P25 HM41 1HM4 H 0 0 N N N -1.372 52.361 119.630 7.838  0.303  -0.020 HM41 P25 17 
P25 HM42 2HM4 H 0 0 N N N -1.999 51.364 120.999 6.896  -0.883 -0.955 HM42 P25 18 
P25 HM43 3HM4 H 0 0 N N N -2.059 53.169 120.996 6.783  0.850  -1.345 HM43 P25 19 
P25 H51  1H5  H 0 1 N N N 0.136  54.658 121.233 4.300  0.747  -1.090 H51  P25 20 
P25 H52  2H5  H 0 1 N N N 0.831  53.842 119.851 4.412  -0.986 -0.699 H52  P25 21 
P25 H61  1H6  H 0 1 N N N 2.816  53.244 121.344 3.364  -0.557 1.507  H61  P25 22 
P25 H62  2H6  H 0 1 N N N 2.117  54.296 122.559 3.252  1.176  1.116  H62  P25 23 
P25 H71  1H7  H 0 1 N N N 2.305  56.083 121.163 1.817  0.644  -0.835 H71  P25 24 
P25 H72  2H7  H 0 1 N N N 3.028  54.995 119.907 1.929  -1.089 -0.444 H72  P25 25 
P25 H2A  H2A  H 0 1 N N N 6.261  54.880 118.736 -0.488 -2.304 0.344  H2A  P25 26 
P25 H2B  H2B  H 0 1 N N N 2.916  58.543 116.335 -5.152 0.087  0.302  H2B  P25 27 
P25 H3B  H3B  H 0 1 N N N 3.281  59.568 118.530 -3.084 2.252  -0.036 H3B  P25 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
P25 C4  CM4  SING N N 1  
P25 C4  C5   SING N N 2  
P25 C4  H41  SING N N 3  
P25 C4  H42  SING N N 4  
P25 CM4 HM41 SING N N 5  
P25 CM4 HM42 SING N N 6  
P25 CM4 HM43 SING N N 7  
P25 C5  C6   SING N N 8  
P25 C5  H51  SING N N 9  
P25 C5  H52  SING N N 10 
P25 C6  C7   SING N N 11 
P25 C6  H61  SING N N 12 
P25 C6  H62  SING N N 13 
P25 C7  O7   SING N N 14 
P25 C7  H71  SING N N 15 
P25 C7  H72  SING N N 16 
P25 O7  PA   SING N N 17 
P25 PA  O1A  DOUB N N 18 
P25 PA  O2A  SING N N 19 
P25 PA  O3A  SING N N 20 
P25 O2A H2A  SING N N 21 
P25 O3A PB   SING N N 22 
P25 PB  O1B  DOUB N N 23 
P25 PB  O2B  SING N N 24 
P25 PB  O3B  SING N N 25 
P25 O2B H2B  SING N N 26 
P25 O3B H3B  SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
P25 SMILES           ACDLabs              10.04 "O=P(OP(=O)(OCCCCC)O)(O)O"                                                           
P25 SMILES_CANONICAL CACTVS               3.341 "CCCCCO[P@](O)(=O)O[P](O)(O)=O"                                                      
P25 SMILES           CACTVS               3.341 "CCCCCO[P](O)(=O)O[P](O)(O)=O"                                                       
P25 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCCCCO[P@@](=O)(O)OP(=O)(O)O"                                                       
P25 SMILES           "OpenEye OEToolkits" 1.5.0 "CCCCCOP(=O)(O)OP(=O)(O)O"                                                           
P25 InChI            InChI                1.03  "InChI=1S/C5H14O7P2/c1-2-3-4-5-11-14(9,10)12-13(6,7)8/h2-5H2,1H3,(H,9,10)(H2,6,7,8)" 
P25 InChIKey         InChI                1.03  VFFCVKZHJFIUBM-UHFFFAOYSA-N                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
P25 "SYSTEMATIC NAME" ACDLabs              10.04 "pentyl trihydrogen diphosphate"      
P25 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "pentyl phosphono hydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
P25 "Create component"  2004-07-01 RCSB 
P25 "Modify descriptor" 2011-06-04 RCSB 
# 
