data_OS5
#

_chem_comp.id                                   OS5
_chem_comp.name                                 "(3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-({[3-(1-benzyl-1H-1,2,3-triazol-4-yl)propyl]sulfanyl}methyl)pyrrolidin-3-ol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H30 N8 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2018-07-03
_chem_comp.pdbx_modified_date                   2019-03-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       478.613
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    OS5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6DYW
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OS5  O    O1   O  0  1  N  N  N  -1.043  -16.835  -42.239   -3.847   3.478  -1.330  O    OS5   1  
OS5  C15  C1   C  0  1  N  N  R   0.035  -17.761  -42.240   -3.516   2.757  -0.141  C15  OS5   2  
OS5  C14  C2   C  0  1  N  N  N   0.633  -17.712  -40.849   -4.731   1.948   0.349  C14  OS5   3  
OS5  N    N1   N  0  1  N  N  N  -0.109  -18.780  -40.189   -4.350   0.520   0.299  N    OS5   4  
OS5  C7   C3   C  0  1  N  N  N   0.087  -19.098  -38.795   -4.979  -0.232   1.393  C7   OS5   5  
OS5  C8   C4   C  0  1  Y  N  N   1.059  -20.277  -38.692   -6.462  -0.333   1.147  C8   OS5   6  
OS5  C13  C5   C  0  1  Y  N  N   2.427  -20.419  -38.933   -7.131  -1.274   0.254  C13  OS5   7  
OS5  N4   N2   N  0  1  Y  N  N   3.291  -19.477  -39.410   -6.725  -2.253  -0.558  N4   OS5   8  
OS5  C12  C6   C  0  1  Y  N  N   4.565  -19.849  -39.559   -7.599  -2.945  -1.255  C12  OS5   9  
OS5  N3   N3   N  0  1  Y  N  N   5.037  -21.079  -39.288   -8.898  -2.713  -1.191  N3   OS5  10  
OS5  C11  C7   C  0  1  Y  N  N   4.202  -22.043  -38.818   -9.392  -1.758  -0.410  C11  OS5  11  
OS5  N2   N4   N  0  1  N  N  N   4.720  -23.269  -38.555  -10.757  -1.526  -0.352  N2   OS5  12  
OS5  C10  C8   C  0  1  Y  N  N   2.849  -21.703  -38.631   -8.505  -0.992   0.354  C10  OS5  13  
OS5  N1   N5   N  0  1  Y  N  N   1.734  -22.372  -38.212   -8.646   0.046   1.245  N1   OS5  14  
OS5  C9   C9   C  0  1  Y  N  N   0.670  -21.528  -38.248   -7.421   0.424   1.712  C9   OS5  15  
OS5  C6   C10  C  0  1  N  N  N  -0.994  -19.566  -41.033   -2.870   0.491   0.415  C6   OS5  16  
OS5  C5   C11  C  0  1  N  N  S  -0.298  -19.213  -42.276   -2.424   1.704  -0.438  C5   OS5  17  
OS5  C4   C12  C  0  1  N  N  N   0.523  -20.238  -42.973   -1.051   2.208   0.012  C4   OS5  18  
OS5  S    S1   S  0  1  N  N  N   0.772  -20.093  -44.703    0.223   1.015  -0.485  S    OS5  19  
OS5  C3   C13  C  0  1  N  N  N  -0.610  -21.049  -45.266    1.753   1.774   0.126  C3   OS5  20  
OS5  C2   C14  C  0  1  N  N  N  -0.707  -21.171  -46.780    2.942   0.875  -0.220  C2   OS5  21  
OS5  C1   C15  C  0  1  N  N  N  -1.948  -22.007  -47.044    4.233   1.515   0.295  C1   OS5  22  
OS5  C    C16  C  0  1  Y  N  N  -2.250  -22.133  -48.508    5.403   0.630  -0.045  C    OS5  23  
OS5  N5   N6   N  0  1  Y  N  N  -1.358  -22.430  -49.476    5.548  -0.662   0.269  N5   OS5  24  
OS5  N7   N7   N  0  1  Y  N  N  -2.050  -22.449  -50.700    6.674  -1.079  -0.189  N7   OS5  25  
OS5  N6   N8   N  0  1  Y  N  N  -3.375  -22.167  -50.375    7.288  -0.124  -0.796  N6   OS5  26  
OS5  C16  C17  C  0  1  Y  N  N  -3.507  -21.957  -49.071    6.513   0.984  -0.734  C16  OS5  27  
OS5  C17  C18  C  0  1  N  N  N  -4.306  -22.158  -51.499    8.598  -0.220  -1.445  C17  OS5  28  
OS5  C18  C19  C  0  1  Y  N  N  -5.075  -20.867  -51.569    9.611  -0.738  -0.457  C18  OS5  29  
OS5  C23  C20  C  0  1  Y  N  N  -6.249  -20.700  -50.826    9.828  -2.098  -0.338  C23  OS5  30  
OS5  C22  C21  C  0  1  Y  N  N  -6.956  -19.499  -50.925   10.757  -2.573   0.568  C22  OS5  31  
OS5  C21  C22  C  0  1  Y  N  N  -6.486  -18.477  -51.760   11.470  -1.688   1.355  C21  OS5  32  
OS5  C20  C23  C  0  1  Y  N  N  -5.313  -18.650  -52.504   11.253  -0.328   1.236  C20  OS5  33  
OS5  C19  C24  C  0  1  Y  N  N  -4.607  -19.850  -52.407   10.328   0.147   0.326  C19  OS5  34  
OS5  H1   H1   H  0  1  N  N  N  -0.700  -15.949  -42.215   -4.559   4.122  -1.214  H1   OS5  35  
OS5  H2   H2   H  0  1  N  N  N   0.793  -17.512  -42.997   -3.181   3.444   0.636  H2   OS5  36  
OS5  H3   H3   H  0  1  N  N  N   1.713  -17.921  -40.866   -4.977   2.231   1.373  H3   OS5  37  
OS5  H4   H4   H  0  1  N  N  N   0.455  -16.739  -40.367   -5.585   2.127  -0.304  H4   OS5  38  
OS5  H6   H6   H  0  1  N  N  N   0.506  -18.226  -38.272   -4.549  -1.233   1.441  H6   OS5  39  
OS5  H7   H7   H  0  1  N  N  N  -0.876  -19.371  -38.339   -4.802   0.284   2.337  H7   OS5  40  
OS5  H8   H8   H  0  1  N  N  N   5.265  -19.111  -39.922   -7.242  -3.731  -1.904  H8   OS5  41  
OS5  H9   H9   H  0  1  N  N  N   5.698  -23.269  -38.762  -11.363  -2.063  -0.886  H9   OS5  42  
OS5  H10  H10  H  0  1  N  N  N   4.584  -23.488  -37.589  -11.106  -0.826   0.221  H10  OS5  43  
OS5  H11  H11  H  0  1  N  N  N   1.706  -23.329  -37.925   -9.490   0.448   1.505  H11  OS5  44  
OS5  H12  H12  H  0  1  N  N  N  -0.338  -21.796  -37.969   -7.246   1.214   2.427  H12  OS5  45  
OS5  H13  H13  H  0  1  N  N  N  -2.037  -19.218  -41.008   -2.563   0.618   1.454  H13  OS5  46  
OS5  H14  H14  H  0  1  N  N  N  -0.961  -20.643  -40.810   -2.469  -0.437   0.008  H14  OS5  47  
OS5  H15  H15  H  0  1  N  N  N  -1.159  -19.180  -42.960   -2.413   1.448  -1.498  H15  OS5  48  
OS5  H16  H16  H  0  1  N  N  N   0.042  -21.211  -42.797   -0.846   3.172  -0.454  H16  OS5  49  
OS5  H17  H17  H  0  1  N  N  N   1.517  -20.230  -42.502   -1.042   2.319   1.096  H17  OS5  50  
OS5  H18  H18  H  0  1  N  N  N  -1.531  -20.574  -44.898    1.887   2.750  -0.343  H18  OS5  51  
OS5  H19  H19  H  0  1  N  N  N  -0.525  -22.061  -44.843    1.692   1.896   1.207  H19  OS5  52  
OS5  H20  H20  H  0  1  N  N  N   0.186  -21.671  -47.183    2.808  -0.100   0.249  H20  OS5  53  
OS5  H21  H21  H  0  1  N  N  N  -0.809  -20.177  -47.240    3.003   0.754  -1.301  H21  OS5  54  
OS5  H22  H22  H  0  1  N  N  N  -2.806  -21.533  -46.545    4.366   2.491  -0.173  H22  OS5  55  
OS5  H23  H23  H  0  1  N  N  N  -1.792  -23.013  -46.627    4.171   1.637   1.377  H23  OS5  56  
OS5  H24  H24  H  0  1  N  N  N  -4.416  -21.699  -48.549    6.738   1.957  -1.146  H24  OS5  57  
OS5  H25  H25  H  0  1  N  N  N  -5.015  -22.990  -51.382    8.534  -0.903  -2.292  H25  OS5  58  
OS5  H26  H26  H  0  1  N  N  N  -3.740  -22.288  -52.433    8.903   0.766  -1.796  H26  OS5  59  
OS5  H27  H27  H  0  1  N  N  N  -6.605  -21.491  -50.183    9.271  -2.790  -0.953  H27  OS5  60  
OS5  H28  H28  H  0  1  N  N  N  -7.864  -19.359  -50.358   10.926  -3.636   0.662  H28  OS5  61  
OS5  H29  H29  H  0  1  N  N  N  -7.033  -17.548  -51.830   12.196  -2.059   2.064  H29  OS5  62  
OS5  H30  H30  H  0  1  N  N  N  -4.957  -17.860  -53.149   11.814   0.364   1.848  H30  OS5  63  
OS5  H31  H31  H  0  1  N  N  N  -3.701  -19.993  -52.978   10.159   1.210   0.232  H31  OS5  64  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OS5  C20  C19  DOUB  Y  N   1  
OS5  C20  C21  SING  Y  N   2  
OS5  C19  C18  SING  Y  N   3  
OS5  C21  C22  DOUB  Y  N   4  
OS5  C18  C17  SING  N  N   5  
OS5  C18  C23  DOUB  Y  N   6  
OS5  C17  N6   SING  N  N   7  
OS5  C22  C23  SING  Y  N   8  
OS5  N7   N6   SING  Y  N   9  
OS5  N7   N5   DOUB  Y  N  10  
OS5  N6   C16  SING  Y  N  11  
OS5  N5   C    SING  Y  N  12  
OS5  C16  C    DOUB  Y  N  13  
OS5  C    C1   SING  N  N  14  
OS5  C1   C2   SING  N  N  15  
OS5  C2   C3   SING  N  N  16  
OS5  C3   S    SING  N  N  17  
OS5  S    C4   SING  N  N  18  
OS5  C4   C5   SING  N  N  19  
OS5  C5   C15  SING  N  N  20  
OS5  C5   C6   SING  N  N  21  
OS5  C15  O    SING  N  N  22  
OS5  C15  C14  SING  N  N  23  
OS5  C6   N    SING  N  N  24  
OS5  C14  N    SING  N  N  25  
OS5  N    C7   SING  N  N  26  
OS5  C12  N4   DOUB  Y  N  27  
OS5  C12  N3   SING  Y  N  28  
OS5  N4   C13  SING  Y  N  29  
OS5  N3   C11  DOUB  Y  N  30  
OS5  C13  C8   SING  Y  N  31  
OS5  C13  C10  DOUB  Y  N  32  
OS5  C11  C10  SING  Y  N  33  
OS5  C11  N2   SING  N  N  34  
OS5  C7   C8   SING  N  N  35  
OS5  C8   C9   DOUB  Y  N  36  
OS5  C10  N1   SING  Y  N  37  
OS5  C9   N1   SING  Y  N  38  
OS5  O    H1   SING  N  N  39  
OS5  C15  H2   SING  N  N  40  
OS5  C14  H3   SING  N  N  41  
OS5  C14  H4   SING  N  N  42  
OS5  C7   H6   SING  N  N  43  
OS5  C7   H7   SING  N  N  44  
OS5  C12  H8   SING  N  N  45  
OS5  N2   H9   SING  N  N  46  
OS5  N2   H10  SING  N  N  47  
OS5  N1   H11  SING  N  N  48  
OS5  C9   H12  SING  N  N  49  
OS5  C6   H13  SING  N  N  50  
OS5  C6   H14  SING  N  N  51  
OS5  C5   H15  SING  N  N  52  
OS5  C4   H16  SING  N  N  53  
OS5  C4   H17  SING  N  N  54  
OS5  C3   H18  SING  N  N  55  
OS5  C3   H19  SING  N  N  56  
OS5  C2   H20  SING  N  N  57  
OS5  C2   H21  SING  N  N  58  
OS5  C1   H22  SING  N  N  59  
OS5  C1   H23  SING  N  N  60  
OS5  C16  H24  SING  N  N  61  
OS5  C17  H25  SING  N  N  62  
OS5  C17  H26  SING  N  N  63  
OS5  C23  H27  SING  N  N  64  
OS5  C22  H28  SING  N  N  65  
OS5  C21  H29  SING  N  N  66  
OS5  C20  H30  SING  N  N  67  
OS5  C19  H31  SING  N  N  68  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OS5  SMILES            ACDLabs               12.01  "OC3CN(Cc1cnc2c1ncnc2N)CC3CSCCCc4nnn(c4)Cc5ccccc5"  
OS5  InChI             InChI                 1.03   "InChI=1S/C24H30N8OS/c25-24-23-22(27-16-28-24)18(9-26-23)11-31-12-19(21(33)14-31)15-34-8-4-7-20-13-32(30-29-20)10-17-5-2-1-3-6-17/h1-3,5-6,9,13,16,19,21,26,33H,4,7-8,10-12,14-15H2,(H2,25,27,28)/t19-,21+/m1/s1"  
OS5  InChIKey          InChI                 1.03   BROXRHKDLDDNBO-CTNGQTDRSA-N  
OS5  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc2c(CN3C[C@H](O)[C@@H](CSCCCc4cn(Cc5ccccc5)nn4)C3)c[nH]c12"  
OS5  SMILES            CACTVS                3.385  "Nc1ncnc2c(CN3C[CH](O)[CH](CSCCCc4cn(Cc5ccccc5)nn4)C3)c[nH]c12"  
OS5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1ccc(cc1)Cn2cc(nn2)CCCSC[C@H]3CN(C[C@@H]3O)Cc4c[nH]c5c4ncnc5N"  
OS5  SMILES            "OpenEye OEToolkits"  2.0.6  "c1ccc(cc1)Cn2cc(nn2)CCCSCC3CN(CC3O)Cc4c[nH]c5c4ncnc5N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OS5  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-({[3-(1-benzyl-1H-1,2,3-triazol-4-yl)propyl]sulfanyl}methyl)pyrrolidin-3-ol"  
OS5  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(3~{R},4~{S})-1-[(4-azanyl-5~{H}-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-[3-[1-(phenylmethyl)-1,2,3-triazol-4-yl]propylsulfanylmethyl]pyrrolidin-3-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OS5  "Create component"    2018-07-03  RCSB  
OS5  "Other modification"  2018-07-03  RCSB  
OS5  "Initial release"     2019-03-20  RCSB  
##
