data_JO5
#

_chem_comp.id                                   JO5
_chem_comp.name                                 "4-azanyl-2-[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]isoindole-1,3-dione"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H9 N3 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-03-13
_chem_comp.pdbx_modified_date                   2019-08-02
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       259.218
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JO5
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6R0U
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JO5  C4   C1   C  0  1  Y  N  N  27.237  -15.336   5.622   4.222  -0.642   0.021  C4   JO5   1  
JO5  C5   C2   C  0  1  Y  N  N  26.853  -14.034   5.914   3.699  -1.903   0.212  C5   JO5   2  
JO5  C6   C3   C  0  1  Y  N  N  26.304  -13.214   4.929   2.325  -2.100   0.243  C6   JO5   3  
JO5  C11  C4   C  0  1  N  N  N  24.620  -14.473  -2.140  -3.593  -0.370  -0.624  C11  JO5   4  
JO5  C7   C5   C  0  1  Y  N  N  26.130  -13.763   3.671   1.469  -1.025   0.082  C7   JO5   5  
JO5  C8   C6   C  0  1  N  N  N  25.603  -13.122   2.451  -0.001  -0.869   0.060  C8   JO5   6  
JO5  C9   C7   C  0  1  N  N  S  25.135  -13.786   0.100  -1.647   0.975  -0.215  C9   JO5   7  
JO5  C10  C8   C  0  1  N  N  N  25.804  -14.149  -1.247  -2.441   0.292  -1.348  C10  JO5   8  
JO5  C12  C9   C  0  1  N  N  N  23.806  -14.490  -0.013  -2.435   0.627   1.029  C12  JO5   9  
JO5  N1   N1   N  0  1  N  N  N  27.444  -17.161   4.059   3.906   1.725  -0.330  N1   JO5  10  
JO5  N2   N2   N  0  1  N  N  N  25.711  -14.059   1.416  -0.290   0.430  -0.136  N2   JO5  11  
JO5  C3   C10  C  0  1  Y  N  N  27.073  -15.876   4.337   3.376   0.458  -0.138  C3   JO5  12  
JO5  N3   N3   N  0  1  N  N  N  23.528  -14.634  -1.331  -3.491  -0.120   0.687  N3   JO5  13  
JO5  O1   O1   O  0  1  N  N  N  26.168  -16.354   1.321   0.879   2.365  -0.428  O1   JO5  14  
JO5  C1   C11  C  0  1  N  N  N  26.176  -15.297   1.914   0.832   1.164  -0.247  C1   JO5  15  
JO5  C2   C12  C  0  1  Y  N  N  26.511  -15.061   3.342   1.995   0.270  -0.114  C2   JO5  16  
JO5  O2   O2   O  0  1  N  N  N  25.135  -12.016   2.324  -0.812  -1.764   0.195  O2   JO5  17  
JO5  O3   O3   O  0  1  N  N  N  24.546  -14.620  -3.358  -4.471  -1.020  -1.149  O3   JO5  18  
JO5  O4   O4   O  0  1  N  N  N  23.075  -14.778   0.889  -2.153   0.971   2.157  O4   JO5  19  
JO5  H1   H1   H  0  1  N  N  N  27.671  -15.946   6.400   5.293  -0.503  -0.001  H1   JO5  20  
JO5  H2   H2   H  0  1  N  N  N  26.981  -13.652   6.916   4.363  -2.745   0.337  H2   JO5  21  
JO5  H3   H3   H  0  1  N  N  N  26.026  -12.192   5.139   1.924  -3.092   0.392  H3   JO5  22  
JO5  H4   H4   H  0  1  N  N  N  24.924  -12.707   0.056  -1.618   2.054  -0.365  H4   JO5  23  
JO5  H5   H5   H  0  1  N  N  N  26.467  -15.020  -1.137  -1.825  -0.454  -1.852  H5   JO5  24  
JO5  H6   H6   H  0  1  N  N  N  26.378  -13.299  -1.645  -2.809   1.031  -2.059  H6   JO5  25  
JO5  H7   H7   H  0  1  N  N  N  27.822  -17.585   4.882   4.868   1.850  -0.354  H7   JO5  26  
JO5  H8   H8   H  0  1  N  N  N  26.646  -17.680   3.753   3.315   2.486  -0.440  H8   JO5  27  
JO5  H9   H9   H  0  1  N  N  N  22.613  -14.838  -1.679  -4.131  -0.453   1.336  H9   JO5  28  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JO5  O3   C11  DOUB  N  N   1  
JO5  C11  N3   SING  N  N   2  
JO5  C11  C10  SING  N  N   3  
JO5  N3   C12  SING  N  N   4  
JO5  C10  C9   SING  N  N   5  
JO5  C12  C9   SING  N  N   6  
JO5  C12  O4   DOUB  N  N   7  
JO5  C9   N2   SING  N  N   8  
JO5  O1   C1   DOUB  N  N   9  
JO5  N2   C1   SING  N  N  10  
JO5  N2   C8   SING  N  N  11  
JO5  C1   C2   SING  N  N  12  
JO5  O2   C8   DOUB  N  N  13  
JO5  C8   C7   SING  N  N  14  
JO5  C2   C7   DOUB  Y  N  15  
JO5  C2   C3   SING  Y  N  16  
JO5  C7   C6   SING  Y  N  17  
JO5  N1   C3   SING  N  N  18  
JO5  C3   C4   DOUB  Y  N  19  
JO5  C6   C5   DOUB  Y  N  20  
JO5  C4   C5   SING  Y  N  21  
JO5  C4   H1   SING  N  N  22  
JO5  C5   H2   SING  N  N  23  
JO5  C6   H3   SING  N  N  24  
JO5  C9   H4   SING  N  N  25  
JO5  C10  H5   SING  N  N  26  
JO5  C10  H6   SING  N  N  27  
JO5  N1   H7   SING  N  N  28  
JO5  N1   H8   SING  N  N  29  
JO5  N3   H9   SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JO5  InChI             InChI                 1.03   "InChI=1S/C12H9N3O4/c13-6-3-1-2-5-9(6)12(19)15(11(5)18)7-4-8(16)14-10(7)17/h1-3,7H,4,13H2,(H,14,16,17)/t7-/m0/s1"  
JO5  InChIKey          InChI                 1.03   MSHTVRYXGFREAN-ZETCQYMHSA-N  
JO5  SMILES_CANONICAL  CACTVS                3.385  "Nc1cccc2C(=O)N([C@H]3CC(=O)NC3=O)C(=O)c12"  
JO5  SMILES            CACTVS                3.385  "Nc1cccc2C(=O)N([CH]3CC(=O)NC3=O)C(=O)c12"  
JO5  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc2c(c(c1)N)C(=O)N(C2=O)[C@H]3CC(=O)NC3=O"  
JO5  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc2c(c(c1)N)C(=O)N(C2=O)C3CC(=O)NC3=O"  
#
_pdbx_chem_comp_identifier.comp_id          JO5
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "4-azanyl-2-[(3~{S})-2,5-bis(oxidanylidene)pyrrolidin-3-yl]isoindole-1,3-dione"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JO5  "Create component"  2019-03-13  EBI   
JO5  "Initial release"   2019-08-07  RCSB  
##
