data_765
# 
_chem_comp.id                                    765 
_chem_comp.name                                  "5'-{1-[(3S)-3-amino-3-carboxypropyl]aziridin-1-ium-1-yl}-5'-deoxyadenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H24 N7 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2016-03-16 
_chem_comp.pdbx_modified_date                    2017-03-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        394.406 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     765 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5ISH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
765 C1  CG   C 0 1 N N N 52.724 35.089 133.261 2.957  -0.209 1.155  C1  765 1  
765 C2  CB   C 0 1 N N N 52.174 35.521 134.623 3.716  0.530  0.051  C2  765 2  
765 C3  CA   C 0 1 N N S 53.172 35.975 135.668 3.840  2.010  0.419  C3  765 3  
765 N1  N    N 0 1 N N N 54.205 36.827 135.087 2.504  2.621  0.448  N1  765 4  
765 C4  C    C 0 1 N N N 53.723 34.745 136.242 4.692  2.713  -0.606 C4  765 5  
765 O1  O    O 0 1 N N N 54.902 34.405 135.965 4.171  3.360  -1.483 O1  765 6  
765 C5  C5*  C 0 1 N N N 51.552 35.505 130.987 2.234  -2.047 -0.353 C5  765 7  
765 C6  C4*  C 0 1 N N R 50.785 36.685 131.316 0.757  -2.274 -0.025 C6  765 8  
765 C7  C3*  C 0 1 N N S 49.285 36.503 131.195 -0.013 -2.713 -1.291 C7  765 9  
765 O2  O3*  O 0 1 N N N 48.697 37.003 132.345 -0.172 -4.133 -1.312 O2  765 10 
765 C8  C2*  C 0 1 N N R 48.869 37.242 130.043 -1.385 -2.016 -1.156 C8  765 11 
765 O3  O2*  O 0 1 N N N 47.604 37.858 130.282 -2.434 -2.984 -1.090 O3  765 12 
765 C9  C1*  C 0 1 N N R 49.884 38.206 129.846 -1.282 -1.238 0.175  C9  765 13 
765 O4  O4*  O 0 1 N N N 51.109 37.636 130.382 0.135  -1.035 0.377  O4  765 14 
765 N2  N9   N 0 1 Y N N 50.067 38.623 128.457 -1.973 0.049  0.068  N2  765 15 
765 C10 C4   C 0 1 Y N N 50.261 39.916 128.130 -3.312 0.270  0.266  C10 765 16 
765 C11 C5   C 0 1 Y N N 50.429 39.943 126.748 -3.513 1.645  0.057  C11 765 17 
765 N3  N7   N 0 1 Y N N 50.337 38.675 126.305 -2.308 2.182  -0.252 N3  765 18 
765 C12 C8   C 0 1 Y N N 50.129 37.872 127.358 -1.402 1.248  -0.240 C12 765 19 
765 N4  N3   N 0 1 Y N N 50.310 41.075 128.809 -4.352 -0.493 0.585  N4  765 20 
765 C13 C2   C 0 1 Y N N 50.513 42.238 128.161 -5.555 0.029  0.705  C13 765 21 
765 N5  N1   N 0 1 Y N N 50.675 42.285 126.832 -5.793 1.314  0.518  N5  765 22 
765 C14 C6   C 0 1 Y N N 50.637 41.157 126.101 -4.815 2.155  0.197  C14 765 23 
765 N6  N6   N 0 1 N N N 50.797 41.182 124.705 -5.073 3.501  0.003  N6  765 24 
765 N7  N44  N 1 1 N N N 51.810 34.665 132.161 2.951  -1.649 0.867  N7  765 25 
765 C15 C45  C 0 1 N N N 51.780 33.259 131.915 4.164  -2.404 1.207  C15 765 26 
765 C16 C48  C 0 1 N N N 50.689 33.923 132.557 2.875  -2.562 2.015  C16 765 27 
765 O5  OXT  O 0 1 N N N 53.045 34.051 136.992 6.030  2.620  -0.544 O5  765 28 
765 H1  HG3  H 0 1 N N N 53.398 34.241 133.451 3.446  -0.032 2.113  H1  765 29 
765 H2  HG2  H 0 1 N N N 53.304 35.940 132.874 1.931  0.158  1.199  H2  765 30 
765 H3  HB2  H 0 1 N N N 51.478 36.355 134.448 4.711  0.098  -0.057 H3  765 31 
765 H4  HB3  H 0 1 N N N 51.624 34.666 135.042 3.173  0.433  -0.890 H4  765 32 
765 H5  HA   H 0 1 N N N 52.635 36.533 136.449 4.303  2.102  1.402  H5  765 33 
765 H6  H2   H 0 1 N N N 54.846 37.109 135.801 2.054  2.548  -0.452 H6  765 34 
765 H7  H    H 0 1 N N N 54.697 36.319 134.379 1.934  2.210  1.172  H7  765 35 
765 H9  H5*1 H 0 1 N N N 50.993 34.915 130.246 2.666  -2.968 -0.743 H9  765 36 
765 H10 H5*2 H 0 1 N N N 52.515 35.817 130.557 2.323  -1.258 -1.100 H10 765 37 
765 H11 H4*1 H 0 1 N N N 51.028 37.024 132.334 0.654  -3.023 0.760  H11 765 38 
765 H12 H3*1 H 0 1 N N N 49.059 35.434 131.067 0.504  -2.374 -2.189 H12 765 39 
765 H13 H3*2 H 0 1 N N N 48.987 36.498 133.095 -0.650 -4.463 -2.086 H13 765 40 
765 H14 H2*1 H 0 1 N N N 48.804 36.574 129.171 -1.549 -1.332 -1.988 H14 765 41 
765 H15 H2*2 H 0 1 N N N 46.944 37.187 130.410 -2.505 -3.542 -1.877 H15 765 42 
765 H16 H1*1 H 0 1 N N N 49.637 39.100 130.438 -1.699 -1.827 0.992  H16 765 43 
765 H17 H81  H 0 1 N N N 50.029 36.797 127.322 -0.353 1.399  -0.451 H17 765 44 
765 H18 H21  H 0 1 N N N 50.546 43.157 128.728 -6.379 -0.619 0.966  H18 765 45 
765 H19 H61  H 0 1 N N N 50.932 42.125 124.401 -4.351 4.104  -0.233 H19 765 46 
765 H20 H62  H 0 1 N N N 51.593 40.633 124.451 -5.976 3.840  0.102  H20 765 47 
765 H21 H451 H 0 1 N N N 51.670 32.879 130.889 4.451  -3.223 0.548  H21 765 48 
765 H22 H452 H 0 1 N N N 52.431 32.583 132.488 4.986  -1.858 1.668  H22 765 49 
765 H23 H482 H 0 1 N N N 49.734 34.047 132.026 2.845  -2.119 3.011  H23 765 50 
765 H24 H481 H 0 1 N N N 50.495 33.751 133.626 2.309  -3.485 1.891  H24 765 51 
765 H25 H3   H 0 1 N N N 53.553 33.300 137.274 6.534  3.088  -1.224 H25 765 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
765 N6  C14 SING N N 1  
765 C14 C11 DOUB Y N 2  
765 C14 N5  SING Y N 3  
765 N3  C11 SING Y N 4  
765 N3  C12 DOUB Y N 5  
765 C11 C10 SING Y N 6  
765 N5  C13 DOUB Y N 7  
765 C12 N2  SING Y N 8  
765 C10 N2  SING Y N 9  
765 C10 N4  DOUB Y N 10 
765 C13 N4  SING Y N 11 
765 N2  C9  SING N N 12 
765 C9  C8  SING N N 13 
765 C9  O4  SING N N 14 
765 C8  O3  SING N N 15 
765 C8  C7  SING N N 16 
765 O4  C6  SING N N 17 
765 C5  C6  SING N N 18 
765 C5  N7  SING N N 19 
765 C7  C6  SING N N 20 
765 C7  O2  SING N N 21 
765 C15 N7  SING N N 22 
765 C15 C16 SING N N 23 
765 N7  C16 SING N N 24 
765 N7  C1  SING N N 25 
765 C1  C2  SING N N 26 
765 C2  C3  SING N N 27 
765 N1  C3  SING N N 28 
765 C3  C4  SING N N 29 
765 O1  C4  DOUB N N 30 
765 C4  O5  SING N N 31 
765 C1  H1  SING N N 32 
765 C1  H2  SING N N 33 
765 C2  H3  SING N N 34 
765 C2  H4  SING N N 35 
765 C3  H5  SING N N 36 
765 N1  H6  SING N N 37 
765 N1  H7  SING N N 38 
765 C5  H9  SING N N 39 
765 C5  H10 SING N N 40 
765 C6  H11 SING N N 41 
765 C7  H12 SING N N 42 
765 O2  H13 SING N N 43 
765 C8  H14 SING N N 44 
765 O3  H15 SING N N 45 
765 C9  H16 SING N N 46 
765 C12 H17 SING N N 47 
765 C13 H18 SING N N 48 
765 N6  H19 SING N N 49 
765 N6  H20 SING N N 50 
765 C15 H21 SING N N 51 
765 C15 H22 SING N N 52 
765 C16 H23 SING N N 53 
765 C16 H24 SING N N 54 
765 O5  H25 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
765 SMILES           ACDLabs              12.01 "C(CC(C(O)=O)N)[N+]4(CC1C(O)C(O)C(O1)n3c2ncnc(c2nc3)N)CC4"                                                                                                                                   
765 InChI            InChI                1.03  "InChI=1S/C16H23N7O5/c17-8(16(26)27)1-2-23(3-4-23)5-9-11(24)12(25)15(28-9)22-7-21-10-13(18)19-6-20-14(10)22/h6-9,11-12,15,24-25H,1-5,17H2,(H2-,18,19,20,26,27)/p+1/t8-,9+,11+,12+,15+/m0/s1" 
765 InChIKey         InChI                1.03  RSBBIDHMRYRIDJ-OPYVMVOTSA-O                                                                                                                                                                  
765 SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CC[N+]1(CC1)C[C@H]2O[C@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34)C(O)=O"                                                                                                                 
765 SMILES           CACTVS               3.385 "N[CH](CC[N+]1(CC1)C[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34)C(O)=O"                                                                                                                        
765 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)C[N+]4(CC4)CC[C@@H](C(=O)O)N)O)O)N"                                                                                                          
765 SMILES           "OpenEye OEToolkits" 2.0.4 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)C[N+]4(CC4)CCC(C(=O)O)N)O)O)N"                                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
765 "SYSTEMATIC NAME" ACDLabs              12.01 "5'-{1-[(3S)-3-amino-3-carboxypropyl]aziridin-1-ium-1-yl}-5'-deoxyadenosine"                                                                     
765 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "(2~{S})-4-[1-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl]aziridin-1-ium-1-yl]-2-azanyl-butanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
765 "Create component" 2016-03-16 EBI  
765 "Initial release"  2017-03-15 RCSB 
# 
