data_3F5
# 
_chem_comp.id                                    3F5 
_chem_comp.name                                  "5'-O-(2-amino-2-oxoethyl)-8-(methylamino)adenosine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H19 N7 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-03-17 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        353.334 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3F5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3M3Z 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3F5 N1   N1   N 0 1 Y N N 18.148 -5.430 -2.575 -5.135 0.767  1.495  N1   3F5 1  
3F5 C2   C2   C 0 1 Y N N 16.842 -5.524 -2.123 -4.401 -0.106 2.161  C2   3F5 2  
3F5 N3   N3   N 0 1 Y N N 16.475 -4.927 -1.032 -3.199 -0.467 1.762  N3   3F5 3  
3F5 C4   C4   C 0 1 Y N N 19.073 -4.670 -1.879 -4.689 1.329  0.376  C4   3F5 4  
3F5 N5   N5   N 0 1 Y N N 17.255 -3.512 0.780  -1.480 -0.120 -0.014 N5   3F5 5  
3F5 C6   C6   C 0 1 Y N N 18.461 -2.896 1.034  -1.515 0.688  -1.117 C6   3F5 6  
3F5 N7   N7   N 0 1 Y N N 19.325 -3.247 0.082  -2.656 1.331  -1.158 N7   3F5 7  
3F5 C8   C8   C 0 1 Y N N 18.675 -4.012 -0.783 -3.413 0.974  -0.089 C8   3F5 8  
3F5 C9   C9   C 0 1 Y N N 17.367 -4.169 -0.332 -2.671 0.042  0.655  C9   3F5 9  
3F5 N10  N10  N 0 1 N N N 20.368 -4.572 -2.307 -5.467 2.243  -0.317 N10  3F5 10 
3F5 C11  C11  C 0 1 N N R 16.025 -3.340 1.510  -0.376 -0.998 0.382  C11  3F5 11 
3F5 O12  O12  O 0 1 N N N 15.871 -1.936 1.775  0.888  -0.317 0.229  O12  3F5 12 
3F5 C13  C13  C 0 1 N N R 14.921 -1.853 2.865  1.879  -1.365 0.154  C13  3F5 13 
3F5 C14  C14  C 0 1 N N S 14.988 -3.223 3.584  1.231  -2.459 -0.723 C14  3F5 14 
3F5 C15  C15  C 0 1 N N R 16.085 -3.949 2.875  -0.287 -2.213 -0.569 C15  3F5 15 
3F5 C16  C16  C 0 1 N N N 15.401 -0.750 3.790  3.158  -0.843 -0.504 C16  3F5 16 
3F5 O17  O17  O 0 1 N N N 16.740 -1.044 4.168  3.764  0.136  0.342  O17  3F5 17 
3F5 O18  O18  O 0 1 N N N 15.781 -5.360 2.806  -0.923 -3.352 0.013  O18  3F5 18 
3F5 O19  O19  O 0 1 N N N 13.757 -3.906 3.399  1.578  -3.759 -0.240 O19  3F5 19 
3F5 N20  N20  N 0 1 N N N 18.674 -2.095 2.085  -0.502 0.809  -2.046 N20  3F5 20 
3F5 C21  C21  C 0 1 N N N 19.981 -1.376 2.220  -0.660 1.712  -3.189 C21  3F5 21 
3F5 C22  C22  C 0 1 N N N 17.163 -0.200 5.231  4.972  0.690  -0.184 C22  3F5 22 
3F5 C23  C23  C 0 1 N N N 18.187 -0.961 6.058  5.521  1.706  0.785  C23  3F5 23 
3F5 O24  O24  O 0 1 N N N 18.028 -2.160 6.281  4.936  1.932  1.823  O24  3F5 24 
3F5 N25  N25  N 0 1 N N N 19.255 -0.345 6.511  6.663  2.362  0.498  N25  3F5 25 
3F5 H2   H2   H 0 1 N N N 16.122 -6.100 -2.685 -4.801 -0.539 3.066  H2   3F5 26 
3F5 HN10 HN10 H 0 0 N N N 20.486 -5.111 -3.141 -6.347 2.480  0.014  HN10 3F5 27 
3F5 HN1A HN1A H 0 0 N N N 20.585 -3.614 -2.496 -5.131 2.647  -1.132 HN1A 3F5 28 
3F5 H11  H11  H 0 1 N N N 15.225 -3.798 0.910  -0.506 -1.330 1.412  H11  3F5 29 
3F5 H13  H13  H 0 1 N N N 13.893 -1.635 2.540  2.095  -1.754 1.149  H13  3F5 30 
3F5 H14  H14  H 0 1 N N N 15.166 -3.140 4.666  1.533  -2.344 -1.763 H14  3F5 31 
3F5 H15  H15  H 0 1 N N N 17.069 -3.866 3.360  -0.735 -1.975 -1.535 H15  3F5 32 
3F5 H16  H16  H 0 1 N N N 15.362 0.219  3.271  3.851  -1.670 -0.658 H16  3F5 33 
3F5 H16A H16A H 0 0 N N N 14.760 -0.704 4.683  2.913  -0.391 -1.466 H16A 3F5 34 
3F5 HO18 HO18 H 0 0 N N N 15.822 -5.736 3.677  -0.897 -4.143 -0.543 HO18 3F5 35 
3F5 HO19 HO19 H 0 0 N N N 13.792 -4.748 3.838  1.197  -4.484 -0.754 HO19 3F5 36 
3F5 HN20 HN20 H 0 0 N N N 17.970 -1.386 2.042  0.314  0.295  -1.943 HN20 3F5 37 
3F5 H21  H21  H 0 1 N N N 19.973 -0.770 3.138  0.235  1.674  -3.809 H21  3F5 38 
3F5 H21A H21A H 0 0 N N N 20.799 -2.109 2.272  -1.524 1.405  -3.779 H21A 3F5 39 
3F5 H21B H21B H 0 0 N N N 20.131 -0.721 1.349  -0.809 2.730  -2.829 H21B 3F5 40 
3F5 H22  H22  H 0 1 N N N 17.615 0.717  4.825  5.703  -0.105 -0.330 H22  3F5 41 
3F5 H22A H22A H 0 0 N N N 16.302 0.073  5.859  4.765  1.174  -1.138 H22A 3F5 42 
3F5 HN25 HN25 H 0 0 N N N 19.939 -0.851 7.037  7.131  2.181  -0.332 HN25 3F5 43 
3F5 HN2A HN2A H 0 0 N N N 19.384 0.630  6.330  7.017  3.015  1.121  HN2A 3F5 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3F5 N1  C2   DOUB Y N 1  
3F5 N1  C4   SING Y N 2  
3F5 C2  N3   SING Y N 3  
3F5 N3  C9   DOUB Y N 4  
3F5 C4  C8   DOUB Y N 5  
3F5 C4  N10  SING N N 6  
3F5 N5  C6   SING Y N 7  
3F5 N5  C9   SING Y N 8  
3F5 N5  C11  SING N N 9  
3F5 C6  N7   DOUB Y N 10 
3F5 C6  N20  SING N N 11 
3F5 N7  C8   SING Y N 12 
3F5 C8  C9   SING Y N 13 
3F5 C11 O12  SING N N 14 
3F5 C11 C15  SING N N 15 
3F5 O12 C13  SING N N 16 
3F5 C13 C14  SING N N 17 
3F5 C13 C16  SING N N 18 
3F5 C14 C15  SING N N 19 
3F5 C14 O19  SING N N 20 
3F5 C15 O18  SING N N 21 
3F5 C16 O17  SING N N 22 
3F5 O17 C22  SING N N 23 
3F5 N20 C21  SING N N 24 
3F5 C22 C23  SING N N 25 
3F5 C23 O24  DOUB N N 26 
3F5 C23 N25  SING N N 27 
3F5 C2  H2   SING N N 28 
3F5 N10 HN10 SING N N 29 
3F5 N10 HN1A SING N N 30 
3F5 C11 H11  SING N N 31 
3F5 C13 H13  SING N N 32 
3F5 C14 H14  SING N N 33 
3F5 C15 H15  SING N N 34 
3F5 C16 H16  SING N N 35 
3F5 C16 H16A SING N N 36 
3F5 O18 HO18 SING N N 37 
3F5 O19 HO19 SING N N 38 
3F5 N20 HN20 SING N N 39 
3F5 C21 H21  SING N N 40 
3F5 C21 H21A SING N N 41 
3F5 C21 H21B SING N N 42 
3F5 C22 H22  SING N N 43 
3F5 C22 H22A SING N N 44 
3F5 N25 HN25 SING N N 45 
3F5 N25 HN2A SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3F5 SMILES           ACDLabs              12.01 "O=C(N)COCC3OC(n2c(nc1c(ncnc12)N)NC)C(O)C3O"                                                                                                                                       
3F5 SMILES_CANONICAL CACTVS               3.370 "CNc1nc2c(N)ncnc2n1[C@@H]3O[C@H](COCC(N)=O)[C@@H](O)[C@H]3O"                                                                                                                       
3F5 SMILES           CACTVS               3.370 "CNc1nc2c(N)ncnc2n1[CH]3O[CH](COCC(N)=O)[CH](O)[CH]3O"                                                                                                                             
3F5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CNc1nc2c(ncnc2n1[C@H]3[C@@H]([C@@H]([C@H](O3)COCC(=O)N)O)O)N"                                                                                                                     
3F5 SMILES           "OpenEye OEToolkits" 1.7.0 "CNc1nc2c(ncnc2n1C3C(C(C(O3)COCC(=O)N)O)O)N"                                                                                                                                       
3F5 InChI            InChI                1.03  "InChI=1S/C13H19N7O5/c1-16-13-19-7-10(15)17-4-18-11(7)20(13)12-9(23)8(22)5(25-12)2-24-3-6(14)21/h4-5,8-9,12,22-23H,2-3H2,1H3,(H2,14,21)(H,16,19)(H2,15,17,18)/t5-,8-,9-,12-/m1/s1" 
3F5 InChIKey         InChI                1.03  YTEPWBADDXGTBX-JJNLEZRASA-N                                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3F5 "SYSTEMATIC NAME" ACDLabs              12.01 "5'-O-(2-amino-2-oxoethyl)-8-(methylamino)adenosine"                                                    
3F5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "2-[[(2R,3S,4R,5R)-5-[6-azanyl-8-(methylamino)purin-9-yl]-3,4-dihydroxy-oxolan-2-yl]methoxy]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3F5 "Create component"     2010-03-17 RCSB 
3F5 "Modify aromatic_flag" 2011-06-04 RCSB 
3F5 "Modify descriptor"    2011-06-04 RCSB 
# 
