data_YR4
# 
_chem_comp.id                                    YR4 
_chem_comp.name                                  "(2R)-2-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}butane-1,4-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H44 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-02-18 
_chem_comp.pdbx_modified_date                    2012-02-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        472.657 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YR4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3AUN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YR4 C1   C1   C 0 1 Y N N -11.123 11.219 -9.506  -1.469 -0.651 -0.277 C1   YR4 1  
YR4 C2   C2   C 0 1 Y N N -9.997  11.765 -10.135 -2.496 0.254  -0.458 C2   YR4 2  
YR4 C3   C3   C 0 1 Y N N -9.402  11.052 -11.177 -3.773 -0.048 -0.007 C3   YR4 3  
YR4 C4   C4   C 0 1 Y N N -10.022 9.767  -11.631 -4.015 -1.260 0.623  C4   YR4 4  
YR4 C5   C5   C 0 1 Y N N -11.131 9.292  -10.973 -2.984 -2.162 0.802  C5   YR4 5  
YR4 C6   C6   C 0 1 Y N N -11.701 9.980  -9.886  -1.712 -1.858 0.352  C6   YR4 6  
YR4 C7   C7   C 0 1 N N N -12.958 9.411  -9.244  -0.590 -2.844 0.548  C7   YR4 7  
YR4 C8   C8   C 0 1 Y N N -13.197 9.772  -7.767  0.725  -2.178 0.234  C8   YR4 8  
YR4 C9   C9   C 0 1 Y N N -12.100 9.852  -6.887  1.056  -0.983 0.846  C9   YR4 9  
YR4 C10  C10  C 0 1 Y N N -14.499 10.019 -7.261  1.601  -2.765 -0.660 C10  YR4 10 
YR4 C11  C11  C 0 1 Y N N -14.705 10.343 -5.920  2.806  -2.156 -0.949 C11  YR4 11 
YR4 C12  C12  C 0 1 Y N N -13.530 10.403 -5.024  3.139  -0.954 -0.340 C12  YR4 12 
YR4 C13  C13  C 0 1 Y N N -12.250 10.162 -5.542  2.261  -0.370 0.560  C13  YR4 13 
YR4 C14  C14  C 0 1 N N N -13.057 7.872  -9.362  -0.583 -3.328 1.999  C14  YR4 14 
YR4 C15  C15  C 0 1 N N N -12.021 7.029  -8.624  -0.527 -2.121 2.939  C15  YR4 15 
YR4 C16  C16  C 0 1 N N N -14.109 9.933  -10.133 -0.791 -4.039 -0.387 C16  YR4 16 
YR4 C17  C17  C 0 1 N N N -14.246 11.454 -10.167 -0.964 -3.540 -1.823 C17  YR4 17 
YR4 C18  C18  C 0 1 N N N -9.416  8.966  -12.772 -5.400 -1.591 1.115  C18  YR4 18 
YR4 C19  C19  C 0 1 N N N -16.082 10.619 -5.354  3.761  -2.797 -1.924 C19  YR4 19 
YR4 O20  O20  O 0 1 N N N -13.701 10.717 -3.702  4.325  -0.353 -0.623 O20  YR4 20 
YR4 O21  O21  O 0 1 N N N -8.321  11.555 -11.840 -4.785 0.841  -0.184 O21  YR4 21 
YR4 C22  C22  C 0 1 N N N -12.580 11.048 -2.886  4.600  0.882  0.041  C22  YR4 22 
YR4 C23  C23  C 0 1 N N R -13.058 11.291 -1.449  5.969  1.403  -0.400 C23  YR4 23 
YR4 C24  C24  C 0 1 N N N -11.912 11.737 -0.536  6.210  2.784  0.213  C24  YR4 24 
YR4 O25  O25  O 0 1 N N N -14.172 12.222 -1.425  6.987  0.502  0.042  O25  YR4 25 
YR4 C26  C26  C 0 1 N N N -12.448 11.593 0.880   6.172  2.679  1.739  C26  YR4 26 
YR4 C27  C27  C 0 1 N N N -11.493 13.183 -0.797  7.580  3.306  -0.228 C27  YR4 27 
YR4 C28  C28  C 0 1 N N N -10.675 10.850 -0.663  5.121  3.749  -0.260 C28  YR4 28 
YR4 C29  C29  C 0 1 N N R -8.669  12.154 -13.106 -4.442 2.115  -0.734 C29  YR4 29 
YR4 C30  C30  C 0 1 N N N -7.462  12.287 -14.018 -5.492 3.148  -0.322 C30  YR4 30 
YR4 C31  C31  C 0 1 N N N -9.444  13.479 -12.913 -4.394 2.015  -2.260 C31  YR4 31 
YR4 C32  C32  C 0 1 N N N -7.357  11.033 -14.907 -5.453 3.339  1.196  C32  YR4 32 
YR4 O33  O33  O 0 1 N N N -8.569  14.444 -12.361 -5.702 1.728  -2.759 O33  YR4 33 
YR4 O34  O34  O 0 1 N N N -8.498  10.894 -15.782 -6.435 4.304  1.580  O34  YR4 34 
YR4 H1   H1   H 0 1 N N N -11.573 11.768 -8.692  -0.476 -0.418 -0.632 H1   YR4 35 
YR4 H2   H2   H 0 1 N N N -9.597  12.718 -9.820  -2.305 1.197  -0.949 H2   YR4 36 
YR4 H5   H5   H 0 1 N N N -11.578 8.364  -11.299 -3.171 -3.105 1.293  H5   YR4 37 
YR4 H9   H9   H 0 1 N N N -11.108 9.666  -7.272  0.372  -0.528 1.547  H9   YR4 38 
YR4 H10  H10  H 0 1 N N N -15.347 9.955  -7.927  1.342  -3.701 -1.133 H10  YR4 39 
YR4 H13  H13  H 0 1 N N N -11.385 10.217 -4.898  2.518  0.564  1.038  H13  YR4 40 
YR4 H14  H14  H 0 1 N N N -14.041 7.586  -8.962  -1.490 -3.900 2.196  H14  YR4 41 
YR4 H14A H14A H 0 0 N N N -12.959 7.630  -10.430 0.289  -3.960 2.168  H14A YR4 42 
YR4 H15  H15  H 0 1 N N N -12.221 5.962  -8.803  -0.757 -2.441 3.955  H15  YR4 43 
YR4 H15A H15A H 0 0 N N N -11.015 7.280  -8.992  0.471  -1.686 2.912  H15A YR4 44 
YR4 H15B H15B H 0 0 N N N -12.080 7.237  -7.546  -1.257 -1.378 2.618  H15B YR4 45 
YR4 H16  H16  H 0 1 N N N -13.922 9.589  -11.161 0.078  -4.694 -0.332 H16  YR4 46 
YR4 H16A H16A H 0 0 N N N -15.050 9.519  -9.742  -1.681 -4.591 -0.084 H16A YR4 47 
YR4 H17  H17  H 0 1 N N N -15.086 11.733 -10.821 -1.142 -4.388 -2.483 H17  YR4 48 
YR4 H17A H17A H 0 0 N N N -14.434 11.828 -9.150  -1.813 -2.858 -1.870 H17A YR4 49 
YR4 H17B H17B H 0 0 N N N -13.317 11.897 -10.555 -0.060 -3.018 -2.137 H17B YR4 50 
YR4 H18  H18  H 0 1 N N N -8.670  8.263  -12.372 -5.953 -2.100 0.325  H18  YR4 51 
YR4 H18A H18A H 0 0 N N N -10.209 8.404  -13.287 -5.331 -2.241 1.987  H18A YR4 52 
YR4 H18B H18B H 0 0 N N N -8.930  9.651  -13.483 -5.919 -0.672 1.387  H18B YR4 53 
YR4 H19  H19  H 0 1 N N N -16.527 9.679  -4.996  3.547  -2.438 -2.931 H19  YR4 54 
YR4 H19A H19A H 0 0 N N N -15.999 11.327 -4.517  4.784  -2.536 -1.655 H19A YR4 55 
YR4 H19B H19B H 0 0 N N N -16.721 11.051 -6.138  3.641  -3.880 -1.891 H19B YR4 56 
YR4 H22  H22  H 0 1 N N N -11.857 10.219 -2.899  3.833  1.612  -0.218 H22  YR4 57 
YR4 H22A H22A H 0 0 N N N -12.098 11.958 -3.273  4.601  0.723  1.119  H22A YR4 58 
YR4 H23  H23  H 0 1 N N N -13.420 10.333 -1.048  5.997  1.478  -1.487 H23  YR4 59 
YR4 HO25 HO25 H 0 0 N N N -14.452 12.358 -0.528  7.020  0.387  1.001  HO25 YR4 60 
YR4 H26  H26  H 0 1 N N N -11.673 11.898 1.599   6.947  1.992  2.076  H26  YR4 61 
YR4 H26A H26A H 0 0 N N N -13.334 12.233 1.003   6.343  3.663  2.175  H26A YR4 62 
YR4 H26B H26B H 0 0 N N N -12.724 10.544 1.062   5.196  2.308  2.053  H26B YR4 63 
YR4 H27  H27  H 0 1 N N N -10.670 13.455 -0.119  7.608  3.380  -1.315 H27  YR4 64 
YR4 H27A H27A H 0 0 N N N -11.158 13.285 -1.840  7.752  4.290  0.209  H27A YR4 65 
YR4 H27B H27B H 0 0 N N N -12.349 13.850 -0.620  8.356  2.618  0.109  H27B YR4 66 
YR4 H28  H28  H 0 1 N N N -9.889  11.217 0.013   4.146  3.378  0.054  H28  YR4 67 
YR4 H28A H28A H 0 0 N N N -10.936 9.816  -0.394  5.293  4.733  0.176  H28A YR4 68 
YR4 H28B H28B H 0 0 N N N -10.309 10.878 -1.700  5.149  3.824  -1.347 H28B YR4 69 
YR4 H29  H29  H 0 1 N N N -9.359  11.472 -13.624 -3.465 2.421  -0.359 H29  YR4 70 
YR4 H30  H30  H 0 1 N N N -7.576  13.179 -14.652 -5.280 4.098  -0.813 H30  YR4 71 
YR4 H30A H30A H 0 0 N N N -6.550  12.385 -13.410 -6.481 2.799  -0.619 H30A YR4 72 
YR4 H31  H31  H 0 1 N N N -9.820  13.833 -13.884 -4.047 2.961  -2.675 H31  YR4 73 
YR4 H31A H31A H 0 0 N N N -10.293 13.316 -12.232 -3.711 1.217  -2.551 H31A YR4 74 
YR4 H32  H32  H 0 1 N N N -6.449  11.113 -15.523 -5.666 2.389  1.686  H32  YR4 75 
YR4 H32A H32A H 0 0 N N N -7.301  10.146 -14.259 -4.464 3.688  1.492  H32A YR4 76 
YR4 HO33 HO33 H 0 0 N N N -9.036  15.262 -12.238 -5.747 1.651  -3.722 HO33 YR4 77 
YR4 HO34 HO34 H 0 0 N N N -8.397  10.112 -16.312 -6.466 4.475  2.531  HO34 YR4 78 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YR4 C1  C2   DOUB Y N 1  
YR4 C1  C6   SING Y N 2  
YR4 C2  C3   SING Y N 3  
YR4 C3  C4   DOUB Y N 4  
YR4 C3  O21  SING N N 5  
YR4 C4  C5   SING Y N 6  
YR4 C4  C18  SING N N 7  
YR4 C5  C6   DOUB Y N 8  
YR4 C6  C7   SING N N 9  
YR4 C7  C8   SING N N 10 
YR4 C7  C14  SING N N 11 
YR4 C7  C16  SING N N 12 
YR4 C8  C9   DOUB Y N 13 
YR4 C8  C10  SING Y N 14 
YR4 C9  C13  SING Y N 15 
YR4 C10 C11  DOUB Y N 16 
YR4 C11 C12  SING Y N 17 
YR4 C11 C19  SING N N 18 
YR4 C12 C13  DOUB Y N 19 
YR4 C12 O20  SING N N 20 
YR4 C14 C15  SING N N 21 
YR4 C16 C17  SING N N 22 
YR4 O20 C22  SING N N 23 
YR4 O21 C29  SING N N 24 
YR4 C22 C23  SING N N 25 
YR4 C23 C24  SING N N 26 
YR4 C23 O25  SING N N 27 
YR4 C24 C26  SING N N 28 
YR4 C24 C27  SING N N 29 
YR4 C24 C28  SING N N 30 
YR4 C29 C30  SING N N 31 
YR4 C29 C31  SING N N 32 
YR4 C30 C32  SING N N 33 
YR4 C31 O33  SING N N 34 
YR4 C32 O34  SING N N 35 
YR4 C1  H1   SING N N 36 
YR4 C2  H2   SING N N 37 
YR4 C5  H5   SING N N 38 
YR4 C9  H9   SING N N 39 
YR4 C10 H10  SING N N 40 
YR4 C13 H13  SING N N 41 
YR4 C14 H14  SING N N 42 
YR4 C14 H14A SING N N 43 
YR4 C15 H15  SING N N 44 
YR4 C15 H15A SING N N 45 
YR4 C15 H15B SING N N 46 
YR4 C16 H16  SING N N 47 
YR4 C16 H16A SING N N 48 
YR4 C17 H17  SING N N 49 
YR4 C17 H17A SING N N 50 
YR4 C17 H17B SING N N 51 
YR4 C18 H18  SING N N 52 
YR4 C18 H18A SING N N 53 
YR4 C18 H18B SING N N 54 
YR4 C19 H19  SING N N 55 
YR4 C19 H19A SING N N 56 
YR4 C19 H19B SING N N 57 
YR4 C22 H22  SING N N 58 
YR4 C22 H22A SING N N 59 
YR4 C23 H23  SING N N 60 
YR4 O25 HO25 SING N N 61 
YR4 C26 H26  SING N N 62 
YR4 C26 H26A SING N N 63 
YR4 C26 H26B SING N N 64 
YR4 C27 H27  SING N N 65 
YR4 C27 H27A SING N N 66 
YR4 C27 H27B SING N N 67 
YR4 C28 H28  SING N N 68 
YR4 C28 H28A SING N N 69 
YR4 C28 H28B SING N N 70 
YR4 C29 H29  SING N N 71 
YR4 C30 H30  SING N N 72 
YR4 C30 H30A SING N N 73 
YR4 C31 H31  SING N N 74 
YR4 C31 H31A SING N N 75 
YR4 C32 H32  SING N N 76 
YR4 C32 H32A SING N N 77 
YR4 O33 HO33 SING N N 78 
YR4 O34 HO34 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YR4 SMILES           ACDLabs              12.01 "O(c1ccc(cc1C)C(c2ccc(OCC(O)C(C)(C)C)c(c2)C)(CC)CC)C(CO)CCO"                                                                                                                             
YR4 SMILES_CANONICAL CACTVS               3.370 "CCC(CC)(c1ccc(OC[C@H](O)C(C)(C)C)c(C)c1)c2ccc(O[C@@H](CO)CCO)c(C)c2"                                                                                                                    
YR4 SMILES           CACTVS               3.370 "CCC(CC)(c1ccc(OC[CH](O)C(C)(C)C)c(C)c1)c2ccc(O[CH](CO)CCO)c(C)c2"                                                                                                                       
YR4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CCC(CC)(c1ccc(c(c1)C)OC[C@@H](C(C)(C)C)O)c2ccc(c(c2)C)O[C@H](CCO)CO"                                                                                                                    
YR4 SMILES           "OpenEye OEToolkits" 1.7.0 "CCC(CC)(c1ccc(c(c1)C)OCC(C(C)(C)C)O)c2ccc(c(c2)C)OC(CCO)CO"                                                                                                                             
YR4 InChI            InChI                1.03  "InChI=1S/C29H44O5/c1-8-29(9-2,23-11-13-26(21(4)17-23)34-24(18-31)14-15-30)22-10-12-25(20(3)16-22)33-19-27(32)28(5,6)7/h10-13,16-17,24,27,30-32H,8-9,14-15,18-19H2,1-7H3/t24-,27+/m1/s1" 
YR4 InChIKey         InChI                1.03  DKNLNQKPISQAEP-SQHAQQRYSA-N                                                                                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YR4 "SYSTEMATIC NAME" ACDLabs              12.01 "(2R)-2-{4-[3-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)pentan-3-yl]-2-methylphenoxy}butane-1,4-diol" 
YR4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-2-[4-[3-[4-[(2R)-2-hydroxy-3,3-dimethyl-butoxy]-3-methyl-phenyl]pentan-3-yl]-2-methyl-phenoxy]butane-1,4-diol"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YR4 "Create component"     2011-02-18 PDBJ 
YR4 "Modify aromatic_flag" 2011-06-04 RCSB 
YR4 "Modify descriptor"    2011-06-04 RCSB 
# 
