data_YI4
# 
_chem_comp.id                                    YI4 
_chem_comp.name                                  "(1R,2Z,3R,5E,7E,9beta,17beta)-2-(2-hydroxyethylidene)-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9-(prop-2-en-1-yl)-9,10-secoestra-5,7-diene-1,3-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H50 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-06-06 
_chem_comp.pdbx_modified_date                    2013-05-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        486.726 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YI4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3VT9 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YI4 O03 O03 O 0 1 N N N 9.540  -0.953 28.451 7.529   -3.488 0.844  O03 YI4 1  
YI4 C25 C25 C 0 1 N N N 8.813  -0.029 27.636 8.189   -2.343 0.301  C25 YI4 2  
YI4 C26 C26 C 0 1 N N N 7.913  0.805  28.562 8.612   -1.411 1.438  C26 YI4 3  
YI4 C27 C27 C 0 1 N N N 7.964  -0.821 26.636 9.427   -2.790 -0.480 C27 YI4 4  
YI4 C24 C24 C 0 1 N N N 9.865  0.832  26.919 7.234   -1.602 -0.637 C24 YI4 5  
YI4 C23 C23 C 0 1 N N N 10.922 1.585  27.767 6.057   -1.047 0.168  C23 YI4 6  
YI4 C22 C22 C 0 1 N N N 12.279 1.668  27.061 5.102   -0.306 -0.771 C22 YI4 7  
YI4 C20 C20 C 0 1 N N R 13.272 2.596  27.788 3.925   0.249  0.034  C20 YI4 8  
YI4 C21 C21 C 0 1 N N N 14.124 1.695  28.698 4.432   1.308  1.015  C21 YI4 9  
YI4 C17 C17 C 0 1 N N R 14.144 3.489  26.817 2.909   0.881  -0.919 C17 YI4 10 
YI4 C16 C16 C 0 1 N N N 14.598 2.759  25.521 2.329   -0.192 -1.877 C16 YI4 11 
YI4 C15 C15 C 0 1 N N N 15.079 3.856  24.553 0.787   -0.167 -1.679 C15 YI4 12 
YI4 C14 C14 C 0 1 N N R 14.926 5.108  25.433 0.537   1.247  -1.149 C14 YI4 13 
YI4 C13 C13 C 0 1 N N R 13.655 4.876  26.268 1.712   1.408  -0.141 C13 YI4 14 
YI4 C18 C18 C 0 1 N N N 12.269 4.828  25.488 1.463   0.507  1.070  C18 YI4 15 
YI4 C12 C12 C 0 1 N N N 13.504 5.971  27.352 1.728   2.848  0.316  C12 YI4 16 
YI4 C11 C11 C 0 1 N N N 13.736 7.466  26.966 0.465   3.079  1.163  C11 YI4 17 
YI4 C09 C09 C 0 1 N N S 14.633 7.778  25.704 -0.809  2.795  0.369  C09 YI4 18 
YI4 C28 C28 C 0 1 N N N 15.975 8.404  26.187 -1.015  3.903  -0.666 C28 YI4 19 
YI4 C29 C29 C 0 1 N N N 16.925 7.548  26.776 -1.265  5.210  0.040  C29 YI4 20 
YI4 C30 C30 C 0 1 N N N 17.905 8.061  27.615 -0.515  6.252  -0.224 C30 YI4 21 
YI4 C08 C08 C 0 1 N N N 14.778 6.530  24.715 -0.712  1.455  -0.346 C08 YI4 22 
YI4 C07 C07 C 0 1 N N N 14.757 6.659  23.315 -1.667  0.534  -0.264 C07 YI4 23 
YI4 C06 C06 C 0 1 N N N 14.626 7.775  22.475 -2.872  0.794  0.540  C06 YI4 24 
YI4 C05 C05 C 0 1 N N N 14.310 7.907  21.118 -3.764  -0.172 0.730  C05 YI4 25 
YI4 C10 C10 C 0 1 N N N 14.014 6.708  20.171 -5.085  0.123  1.403  C10 YI4 26 
YI4 C01 C01 C 0 1 N N R 14.646 6.858  18.766 -6.219  -0.335 0.477  C01 YI4 27 
YI4 O01 O01 O 0 1 N N N 14.071 5.892  17.887 -6.291  0.532  -0.658 O01 YI4 28 
YI4 C04 C04 C 0 1 N N N 14.250 9.336  20.532 -3.479  -1.584 0.271  C04 YI4 29 
YI4 C03 C03 C 0 1 N N R 14.934 9.451  19.155 -4.617  -2.037 -0.653 C03 YI4 30 
YI4 O02 O02 O 0 1 N N N 16.346 9.395  19.402 -4.505  -3.441 -0.898 O02 YI4 31 
YI4 C02 C02 C 0 1 N N N 14.436 8.317  18.216 -5.932  -1.748 0.023  C02 YI4 32 
YI4 C32 C32 C 0 1 N N N 13.831 8.467  16.950 -6.812  -2.700 0.210  C32 YI4 33 
YI4 C33 C33 C 0 1 N N N 13.506 9.593  16.181 -8.184  -2.365 0.735  C33 YI4 34 
YI4 O04 O04 O 0 1 N N N 12.621 9.233  15.126 -9.167  -3.089 -0.009 O04 YI4 35 
YI4 H1  H1  H 0 1 N N N 10.071 -0.474 29.076 8.077   -4.007 1.449  H1  YI4 36 
YI4 H2  H2  H 0 1 N N N 8.537  1.367  29.273 9.292   -1.939 2.106  H2  YI4 37 
YI4 H3  H3  H 0 1 N N N 7.320  1.509  27.960 9.115   -0.538 1.024  H3  YI4 38 
YI4 H4  H4  H 0 1 N N N 7.238  0.137  29.116 7.731   -1.093 1.994  H4  YI4 39 
YI4 H5  H5  H 0 1 N N N 7.223  -1.425 27.181 9.125   -3.454 -1.290 H5  YI4 40 
YI4 H6  H6  H 0 1 N N N 7.445  -0.123 25.963 9.930   -1.916 -0.894 H6  YI4 41 
YI4 H7  H7  H 0 1 N N N 8.615  -1.483 26.046 10.107  -3.318 0.188  H7  YI4 42 
YI4 H8  H8  H 0 1 N N N 10.414 0.168  26.235 7.764   -0.780 -1.120 H8  YI4 43 
YI4 H9  H9  H 0 1 N N N 9.320  1.589  26.336 6.863   -2.290 -1.396 H9  YI4 44 
YI4 H10 H10 H 0 1 N N N 10.560 2.606  27.959 5.527   -1.869 0.650  H10 YI4 45 
YI4 H11 H11 H 0 1 N N N 11.052 1.056  28.723 6.428   -0.359 0.927  H11 YI4 46 
YI4 H12 H12 H 0 1 N N N 12.712 0.658  27.012 5.632   0.516  -1.253 H12 YI4 47 
YI4 H13 H13 H 0 1 N N N 12.122 2.050  26.041 4.731   -0.994 -1.530 H13 YI4 48 
YI4 H14 H14 H 0 1 N N N 12.692 3.276  28.430 3.449   -0.561 0.587  H14 YI4 49 
YI4 H15 H15 H 0 1 N N N 13.465 1.101  29.348 4.907   2.117  0.462  H15 YI4 50 
YI4 H16 H16 H 0 1 N N N 14.734 1.020  28.079 3.593   1.702  1.589  H16 YI4 51 
YI4 H17 H17 H 0 1 N N N 14.784 2.320  29.318 5.155   0.857  1.694  H17 YI4 52 
YI4 H18 H18 H 0 1 N N N 15.068 3.704  27.373 3.374   1.686  -1.488 H18 YI4 53 
YI4 H19 H19 H 0 1 N N N 13.756 2.205  25.081 2.577   0.055  -2.909 H19 YI4 54 
YI4 H20 H20 H 0 1 N N N 15.419 2.061  25.744 2.724   -1.175 -1.622 H20 YI4 55 
YI4 H21 H21 H 0 1 N N N 14.444 3.912  23.657 0.272   -0.320 -2.628 H21 YI4 56 
YI4 H22 H22 H 0 1 N N N 16.125 3.699  24.252 0.480   -0.913 -0.947 H22 YI4 57 
YI4 H23 H23 H 0 1 N N N 15.787 5.164  26.115 0.613   1.980  -1.953 H23 YI4 58 
YI4 H24 H24 H 0 1 N N N 11.451 4.657  26.203 1.537   -0.538 0.767  H24 YI4 59 
YI4 H25 H25 H 0 1 N N N 12.108 5.784  24.968 2.208   0.716  1.838  H25 YI4 60 
YI4 H26 H26 H 0 1 N N N 12.290 4.010  24.753 0.467   0.701  1.468  H26 YI4 61 
YI4 H27 H27 H 0 1 N N N 12.479 5.896  27.743 2.617   3.034  0.919  H27 YI4 62 
YI4 H28 H28 H 0 1 N N N 14.220 5.731  28.152 1.722   3.511  -0.548 H28 YI4 63 
YI4 H29 H29 H 0 1 N N N 14.206 7.957  27.831 0.495   2.423  2.033  H29 YI4 64 
YI4 H30 H30 H 0 1 N N N 12.748 7.913  26.783 0.448   4.115  1.500  H30 YI4 65 
YI4 H31 H31 H 0 1 N N N 14.108 8.560  25.136 -1.660  2.777  1.050  H31 YI4 66 
YI4 H32 H32 H 0 1 N N N 16.452 8.871  25.313 -0.123  3.990  -1.287 H32 YI4 67 
YI4 H33 H33 H 0 1 N N N 15.728 9.179  26.928 -1.872  3.659  -1.293 H33 YI4 68 
YI4 H35 H35 H 0 1 N N N 16.891 6.488  26.574 -2.062  5.289  0.765  H35 YI4 69 
YI4 H36 H36 H 0 1 N N N 18.631 7.400  28.064 0.282   6.173  -0.949 H36 YI4 70 
YI4 H37 H37 H 0 1 N N N 17.941 9.121  27.818 -0.695  7.188  0.282  H37 YI4 71 
YI4 H39 H39 H 0 1 N N N 14.861 5.723  22.787 -1.559  -0.404 -0.787 H39 YI4 72 
YI4 H40 H40 H 0 1 N N N 14.804 8.717  22.973 -3.030  1.769  0.976  H40 YI4 73 
YI4 H41 H41 H 0 1 N N N 12.924 6.618  20.054 -5.143  -0.419 2.347  H41 YI4 74 
YI4 H42 H42 H 0 1 N N N 14.410 5.793  20.635 -5.170  1.193  1.589  H42 YI4 75 
YI4 H43 H43 H 0 1 N N N 15.728 6.683  18.856 -7.166  -0.309 1.017  H43 YI4 76 
YI4 H44 H44 H 0 1 N N N 14.210 5.021  18.239 -6.461  1.457  -0.436 H44 YI4 77 
YI4 H45 H45 H 0 1 N N N 14.750 10.023 21.231 -2.534  -1.609 -0.273 H45 YI4 78 
YI4 H46 H46 H 0 1 N N N 13.195 9.627  20.425 -3.421  -2.245 1.135  H46 YI4 79 
YI4 H47 H47 H 0 1 N N N 14.665 10.419 18.707 -4.559  -1.496 -1.597 H47 YI4 80 
YI4 H48 H48 H 0 1 N N N 16.596 10.107 19.979 -3.675  -3.702 -1.321 H48 YI4 81 
YI4 H49 H49 H 0 1 N N N 13.566 7.530  16.482 -6.553  -3.725 -0.011 H49 YI4 82 
YI4 H50 H50 H 0 1 N N N 14.426 10.018 15.753 -8.248  -2.642 1.787  H50 YI4 83 
YI4 H51 H51 H 0 1 N N N 13.020 10.342 16.823 -8.363  -1.295 0.628  H51 YI4 84 
YI4 H52 H52 H 0 1 N N N 12.409 10.004 14.613 -10.076 -2.921 0.275  H52 YI4 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YI4 O04 C33 SING N N 1  
YI4 C33 C32 SING N N 2  
YI4 C32 C02 DOUB N Z 3  
YI4 O01 C01 SING N N 4  
YI4 C02 C01 SING N N 5  
YI4 C02 C03 SING N N 6  
YI4 C01 C10 SING N N 7  
YI4 C03 O02 SING N N 8  
YI4 C03 C04 SING N N 9  
YI4 C10 C05 SING N N 10 
YI4 C04 C05 SING N N 11 
YI4 C05 C06 DOUB N Z 12 
YI4 C06 C07 SING N N 13 
YI4 C07 C08 DOUB N E 14 
YI4 C15 C14 SING N N 15 
YI4 C15 C16 SING N N 16 
YI4 C08 C14 SING N N 17 
YI4 C08 C09 SING N N 18 
YI4 C14 C13 SING N N 19 
YI4 C18 C13 SING N N 20 
YI4 C16 C17 SING N N 21 
YI4 C09 C28 SING N N 22 
YI4 C09 C11 SING N N 23 
YI4 C28 C29 SING N N 24 
YI4 C13 C17 SING N N 25 
YI4 C13 C12 SING N N 26 
YI4 C27 C25 SING N N 27 
YI4 C29 C30 DOUB N N 28 
YI4 C17 C20 SING N N 29 
YI4 C24 C25 SING N N 30 
YI4 C24 C23 SING N N 31 
YI4 C11 C12 SING N N 32 
YI4 C22 C23 SING N N 33 
YI4 C22 C20 SING N N 34 
YI4 C25 O03 SING N N 35 
YI4 C25 C26 SING N N 36 
YI4 C20 C21 SING N N 37 
YI4 O03 H1  SING N N 38 
YI4 C26 H2  SING N N 39 
YI4 C26 H3  SING N N 40 
YI4 C26 H4  SING N N 41 
YI4 C27 H5  SING N N 42 
YI4 C27 H6  SING N N 43 
YI4 C27 H7  SING N N 44 
YI4 C24 H8  SING N N 45 
YI4 C24 H9  SING N N 46 
YI4 C23 H10 SING N N 47 
YI4 C23 H11 SING N N 48 
YI4 C22 H12 SING N N 49 
YI4 C22 H13 SING N N 50 
YI4 C20 H14 SING N N 51 
YI4 C21 H15 SING N N 52 
YI4 C21 H16 SING N N 53 
YI4 C21 H17 SING N N 54 
YI4 C17 H18 SING N N 55 
YI4 C16 H19 SING N N 56 
YI4 C16 H20 SING N N 57 
YI4 C15 H21 SING N N 58 
YI4 C15 H22 SING N N 59 
YI4 C14 H23 SING N N 60 
YI4 C18 H24 SING N N 61 
YI4 C18 H25 SING N N 62 
YI4 C18 H26 SING N N 63 
YI4 C12 H27 SING N N 64 
YI4 C12 H28 SING N N 65 
YI4 C11 H29 SING N N 66 
YI4 C11 H30 SING N N 67 
YI4 C09 H31 SING N N 68 
YI4 C28 H32 SING N N 69 
YI4 C28 H33 SING N N 70 
YI4 C29 H35 SING N N 71 
YI4 C30 H36 SING N N 72 
YI4 C30 H37 SING N N 73 
YI4 C07 H39 SING N N 74 
YI4 C06 H40 SING N N 75 
YI4 C10 H41 SING N N 76 
YI4 C10 H42 SING N N 77 
YI4 C01 H43 SING N N 78 
YI4 O01 H44 SING N N 79 
YI4 C04 H45 SING N N 80 
YI4 C04 H46 SING N N 81 
YI4 C03 H47 SING N N 82 
YI4 O02 H48 SING N N 83 
YI4 C32 H49 SING N N 84 
YI4 C33 H50 SING N N 85 
YI4 C33 H51 SING N N 86 
YI4 O04 H52 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YI4 SMILES           ACDLabs              12.01 "OC3C(=C\CO)\C(O)C\C(=C\C=C1/C(C/C=C)CCC2(C)C(C(C)CCCC(O)(C)C)CCC12)C3" 
YI4 InChI            InChI                1.03  
"InChI=1S/C31H50O4/c1-6-8-23-14-17-31(5)26(21(2)9-7-16-30(3,4)35)12-13-27(31)24(23)11-10-22-19-28(33)25(15-18-32)29(34)20-22/h6,10-11,15,21,23,26-29,32-35H,1,7-9,12-14,16-20H2,2-5H3/b22-10-,24-11+,25-15+/t21-,23-,26-,27+,28-,29-,31-/m1/s1" 
YI4 InChIKey         InChI                1.03  VQPYCEUJPLIUFQ-ZVOFGSMJSA-N 
YI4 SMILES_CANONICAL CACTVS               3.370 "C[C@H](CCCC(C)(C)O)[C@H]1CC[C@H]2/C(=C/C=C3C[C@@H](O)C(=CCO)[C@H](O)C3)[C@@H](CC[C@]12C)CC=C" 
YI4 SMILES           CACTVS               3.370 "C[CH](CCCC(C)(C)O)[CH]1CC[CH]2C(=CC=C3C[CH](O)C(=CCO)[CH](O)C3)[CH](CC[C]12C)CC=C" 
YI4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H](CCCC(C)(C)O)[C@H]1CC[C@@H]\2[C@@]1(CC[C@H](/C2=C\C=C3C[C@H](C(=CCO)[C@@H](C3)O)O)CC=C)C" 
YI4 SMILES           "OpenEye OEToolkits" 1.7.6 "CC(CCCC(C)(C)O)C1CCC2C1(CCC(C2=CC=C3CC(C(=CCO)C(C3)O)O)CC=C)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YI4 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2Z,3R,5E,7E,9beta,17beta)-2-(2-hydroxyethylidene)-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9-(prop-2-en-1-yl)-9,10-secoestra-5,7-diene-1,3-diol"                                                     
YI4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R,3R)-5-[(2E)-2-[(1R,3aR,5S,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-5-prop-2-enyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-2-(2-oxidanylethylidene)cyclohexane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YI4 "Create component" 2012-06-06 PDBJ 
YI4 "Initial release"  2013-05-22 RCSB 
# 
