data_FV4
# 
_chem_comp.id                                    FV4 
_chem_comp.name                                  "6-chloro-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-1H-benzimidazole" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H22 Cl F N4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-04-20 
_chem_comp.pdbx_modified_date                    2018-09-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        372.867 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     FV4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6D5J 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
FV4 N1  N1  N  0 1 Y N N 36.386 28.729 23.623 -0.300 2.428  -0.922 N1  FV4 1  
FV4 N3  N2  N  0 1 N N N 36.736 26.656 19.030 4.254  3.375  0.219  N3  FV4 2  
FV4 C4  C1  C  0 1 N N N 33.044 28.905 22.052 0.206  -0.107 1.590  C4  FV4 3  
FV4 C5  C2  C  0 1 Y N N 35.529 28.549 22.595 0.468  1.738  -0.115 C5  FV4 4  
FV4 C6  C3  C  0 1 Y N N 35.578 29.254 24.664 -1.589 2.020  -0.785 C6  FV4 5  
FV4 C7  C4  C  0 1 Y N N 35.931 29.618 25.970 -2.787 2.408  -1.389 C7  FV4 6  
FV4 C8  C5  C  0 1 Y N N 34.931 30.088 26.795 -3.965 1.790  -1.031 C8  FV4 7  
FV4 C10 C6  C  0 1 Y N N 33.214 29.860 25.059 -2.795 0.391  0.532  C10 FV4 8  
FV4 C13 C7  C  0 1 N N N 36.495 28.120 19.038 3.910  2.678  -1.028 C13 FV4 9  
FV4 C15 C8  C  0 1 N N N 36.034 26.544 21.337 2.178  2.590  1.251  C15 FV4 10 
FV4 C17 C9  C  0 1 Y N N 31.657 31.314 19.518 2.252  -2.734 -0.188 C17 FV4 11 
FV4 N   N3  N  0 1 Y N N 34.211 28.937 22.903 -0.285 0.844  0.590  N   FV4 12 
FV4 C   C10 C  0 1 N N N 33.871 33.878 21.274 -0.974 -4.695 -0.023 C   FV4 13 
FV4 C1  C11 C  0 1 Y N N 33.217 32.569 20.927 0.036  -3.588 0.139  C1  FV4 14 
FV4 C11 C12 C  0 1 Y N N 34.232 29.382 24.228 -1.600 1.002  0.182  C11 FV4 15 
FV4 C12 C13 C  0 1 N N N 36.722 28.646 20.465 2.387  2.598  -1.160 C12 FV4 16 
FV4 C14 C14 C  0 1 N N N 35.844 25.919 19.949 3.700  2.670  1.384  C14 FV4 17 
FV4 C16 C15 C  0 1 Y N N 31.934 30.160 20.238 1.889  -1.556 0.435  C16 FV4 18 
FV4 C18 C16 C  0 1 N N N 30.656 31.332 18.413 3.658  -2.914 -0.699 C18 FV4 19 
FV4 C19 C17 C  0 1 Y N N 32.313 32.502 19.867 1.326  -3.753 -0.336 C19 FV4 20 
FV4 C2  C18 C  0 1 Y N N 33.486 31.400 21.643 -0.325 -2.409 0.763  C2  FV4 21 
FV4 C3  C19 C  0 1 Y N N 32.837 30.201 21.292 0.601  -1.393 0.910  C3  FV4 22 
FV4 C9  C20 C  0 1 Y N N 33.614 30.188 26.321 -3.971 0.785  -0.075 C9  FV4 23 
FV4 F   F1  F  0 1 N N N 32.058 33.581 19.132 1.680  -4.905 -0.946 F   FV4 24 
FV4 N2  N4  N  0 1 N N N 35.746 27.983 21.311 1.833  1.893  0.004  N2  FV4 25 
FV4 CL  CL1 CL 0 0 N N N 32.391 30.742 27.434 -5.466 0.019  0.364  CL  FV4 26 
FV4 H1  H1  H  0 1 N N N 36.590 26.314 18.102 5.253  3.488  0.307  H1  FV4 27 
FV4 H3  H3  H  0 1 N N N 32.158 28.718 22.677 1.072  0.316  2.099  H3  FV4 28 
FV4 H4  H4  H  0 1 N N N 33.160 28.086 21.326 -0.581 -0.308 2.318  H4  FV4 29 
FV4 H5  H5  H  0 1 N N N 36.950 29.534 26.318 -2.790 3.190  -2.134 H5  FV4 30 
FV4 H6  H6  H  0 1 N N N 35.162 30.380 27.809 -4.891 2.091  -1.499 H6  FV4 31 
FV4 H7  H7  H  0 1 N N N 32.191 29.962 24.727 -2.805 -0.392 1.275  H7  FV4 32 
FV4 H8  H8  H  0 1 N N N 37.192 28.614 18.345 4.320  3.226  -1.876 H8  FV4 33 
FV4 H9  H9  H  0 1 N N N 35.460 28.327 18.727 4.327  1.671  -1.008 H9  FV4 34 
FV4 H10 H10 H  0 1 N N N 35.353 26.054 22.048 1.767  2.042  2.099  H10 FV4 35 
FV4 H11 H11 H  0 1 N N N 37.074 26.391 21.661 1.760  3.597  1.232  H11 FV4 36 
FV4 H12 H12 H  0 1 N N N 33.252 34.415 22.008 -1.502 -4.570 -0.968 H12 FV4 37 
FV4 H13 H13 H  0 1 N N N 34.866 33.688 21.703 -0.462 -5.657 -0.017 H13 FV4 38 
FV4 H14 H14 H  0 1 N N N 33.974 34.489 20.365 -1.688 -4.658 0.800  H14 FV4 39 
FV4 H15 H15 H  0 1 N N N 37.741 28.405 20.801 1.973  3.605  -1.207 H15 FV4 40 
FV4 H16 H16 H  0 1 N N N 36.574 29.736 20.496 2.130  2.055  -2.070 H16 FV4 41 
FV4 H17 H17 H  0 1 N N N 34.797 26.022 19.626 4.115  1.663  1.430  H17 FV4 42 
FV4 H18 H18 H  0 1 N N N 36.118 24.854 19.971 3.958  3.212  2.293  H18 FV4 43 
FV4 H19 H19 H  0 1 N N N 31.448 29.231 19.979 2.611  -0.761 0.551  H19 FV4 44 
FV4 H20 H20 H  0 1 N N N 31.157 31.108 17.460 3.716  -2.569 -1.732 H20 FV4 45 
FV4 H21 H21 H  0 1 N N N 29.882 30.575 18.607 4.346  -2.335 -0.083 H21 FV4 46 
FV4 H22 H22 H  0 1 N N N 30.190 32.327 18.357 3.930  -3.969 -0.653 H22 FV4 47 
FV4 H23 H23 H  0 1 N N N 34.189 31.416 22.463 -1.331 -2.280 1.134  H23 FV4 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
FV4 C18 C17 SING N N 1  
FV4 N3  C13 SING N N 2  
FV4 N3  C14 SING N N 3  
FV4 C13 C12 SING N N 4  
FV4 F   C19 SING N N 5  
FV4 C17 C19 DOUB Y N 6  
FV4 C17 C16 SING Y N 7  
FV4 C19 C1  SING Y N 8  
FV4 C14 C15 SING N N 9  
FV4 C16 C3  DOUB Y N 10 
FV4 C12 N2  SING N N 11 
FV4 C1  C   SING N N 12 
FV4 C1  C2  DOUB Y N 13 
FV4 C3  C2  SING Y N 14 
FV4 C3  C4  SING N N 15 
FV4 N2  C15 SING N N 16 
FV4 N2  C5  SING N N 17 
FV4 C4  N   SING N N 18 
FV4 C5  N   SING Y N 19 
FV4 C5  N1  DOUB Y N 20 
FV4 N   C11 SING Y N 21 
FV4 N1  C6  SING Y N 22 
FV4 C11 C6  DOUB Y N 23 
FV4 C11 C10 SING Y N 24 
FV4 C6  C7  SING Y N 25 
FV4 C10 C9  DOUB Y N 26 
FV4 C7  C8  DOUB Y N 27 
FV4 C9  C8  SING Y N 28 
FV4 C9  CL  SING N N 29 
FV4 N3  H1  SING N N 30 
FV4 C4  H3  SING N N 31 
FV4 C4  H4  SING N N 32 
FV4 C7  H5  SING N N 33 
FV4 C8  H6  SING N N 34 
FV4 C10 H7  SING N N 35 
FV4 C13 H8  SING N N 36 
FV4 C13 H9  SING N N 37 
FV4 C15 H10 SING N N 38 
FV4 C15 H11 SING N N 39 
FV4 C   H12 SING N N 40 
FV4 C   H13 SING N N 41 
FV4 C   H14 SING N N 42 
FV4 C12 H15 SING N N 43 
FV4 C12 H16 SING N N 44 
FV4 C14 H17 SING N N 45 
FV4 C14 H18 SING N N 46 
FV4 C16 H19 SING N N 47 
FV4 C18 H20 SING N N 48 
FV4 C18 H21 SING N N 49 
FV4 C18 H22 SING N N 50 
FV4 C2  H23 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
FV4 SMILES           ACDLabs              12.01 "n3c1ccc(cc1n(Cc2cc(c(c(C)c2)F)C)c3N4CCNCC4)Cl"                                                                                       
FV4 InChI            InChI                1.03  "InChI=1S/C20H22ClFN4/c1-13-9-15(10-14(2)19(13)22)12-26-18-11-16(21)3-4-17(18)24-20(26)25-7-5-23-6-8-25/h3-4,9-11,23H,5-8,12H2,1-2H3" 
FV4 InChIKey         InChI                1.03  HQRYJQRNCCMWFK-UHFFFAOYSA-N                                                                                                           
FV4 SMILES_CANONICAL CACTVS               3.385 "Cc1cc(Cn2c3cc(Cl)ccc3nc2N4CCNCC4)cc(C)c1F"                                                                                           
FV4 SMILES           CACTVS               3.385 "Cc1cc(Cn2c3cc(Cl)ccc3nc2N4CCNCC4)cc(C)c1F"                                                                                           
FV4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(ccc3nc2N4CCNCC4)Cl"                                                                                           
FV4 SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cc(cc(c1F)C)Cn2c3cc(ccc3nc2N4CCNCC4)Cl"                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
FV4 "SYSTEMATIC NAME" ACDLabs              12.01 "6-chloro-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-2-(piperazin-1-yl)-1H-benzimidazole"   
FV4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "6-chloranyl-1-[(4-fluoranyl-3,5-dimethyl-phenyl)methyl]-2-piperazin-1-yl-benzimidazole" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
FV4 "Create component" 2018-04-20 RCSB 
FV4 "Initial release"  2018-09-19 RCSB 
# 
