data_D74
#

_chem_comp.id                                   D74
_chem_comp.name                                 "(1R,2S,3R,4R)-3-amino-4-(3-methylphenyl)cyclopentane-1,2-diol"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H17 N O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-10-20
_chem_comp.pdbx_modified_date                   2020-04-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       207.269
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    D74
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5QBC
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
D74  C4   C1   C  0  1  Y  N  N  -11.640   1.156  -0.679  -1.062   1.037   0.783  C4   D74   1  
D74  C5   C2   C  0  1  Y  N  N  -10.880   1.895   0.215  -0.973   0.036  -0.166  C5   D74   2  
D74  C6   C3   C  0  1  Y  N  N  -11.401   3.085   0.708  -2.123  -0.525  -0.689  C6   D74   3  
D74  C7   C4   C  0  1  N  N  R   -9.509   1.436   0.660   0.378  -0.443  -0.631  C7   D74   4  
D74  C8   C5   C  0  1  N  N  N   -8.402   2.496   0.455   1.228   0.746  -1.144  C8   D74   5  
D74  C9   C6   C  0  1  N  N  R   -7.476   2.423   1.664   2.677   0.221  -0.991  C9   D74   6  
D74  C10  C7   C  0  1  N  N  S   -7.972   1.209   2.444   2.651  -0.582   0.326  C10  D74   7  
D74  C11  C8   C  0  1  N  N  R   -9.448   1.192   2.164   1.189  -1.004   0.555  C11  D74   8  
D74  O1   O1   O  0  1  N  N  N   -7.589   3.612   2.445   3.596   1.311  -0.893  O1   D74   9  
D74  O    O2   O  0  1  N  N  N   -7.760   1.346   3.846   3.099   0.237   1.408  O    D74  10  
D74  N    N1   N  0  1  N  N  N  -10.066  -0.126   2.514   1.088  -2.470   0.585  N    D74  11  
D74  C3   C9   C  0  1  Y  N  N  -12.891   1.596  -1.064  -2.301   1.473   1.214  C3   D74  12  
D74  C2   C10  C  0  1  Y  N  N  -13.392   2.785  -0.560  -3.451   0.908   0.696  C2   D74  13  
D74  C1   C11  C  0  1  Y  N  N  -12.652   3.548   0.329  -3.362  -0.085  -0.263  C1   D74  14  
D74  C    C12  C  0  1  N  N  N  -13.185   4.859   0.857  -4.616  -0.701  -0.828  C    D74  15  
D74  H1   H1   H  0  1  N  N  N  -11.251   0.230  -1.077  -0.164   1.476   1.192  H1   D74  16  
D74  H2   H2   H  0  1  N  N  N  -10.815   3.665   1.406  -2.053  -1.306  -1.431  H2   D74  17  
D74  H3   H3   H  0  1  N  N  N   -9.234   0.515   0.126   0.267  -1.199  -1.409  H3   D74  18  
D74  H4   H4   H  0  1  N  N  N   -7.839   2.279  -0.465   1.003   0.959  -2.189  H4   D74  19  
D74  H5   H5   H  0  1  N  N  N   -8.849   3.498   0.383   1.069   1.629  -0.526  H5   D74  20  
D74  H6   H6   H  0  1  N  N  N   -6.440   2.258   1.333   2.939  -0.426  -1.827  H6   D74  21  
D74  H7   H7   H  0  1  N  N  N   -7.500   0.295   2.054   3.286  -1.464   0.238  H7   D74  22  
D74  H8   H8   H  0  1  N  N  N   -9.951   2.009   2.701   0.821  -0.585   1.491  H8   D74  23  
D74  H9   H9   H  0  1  N  N  N   -7.008   3.555   3.195   3.610   1.884  -1.672  H9   D74  24  
D74  H10  H10  H  0  1  N  N  N   -8.082   0.572   4.293   4.008   0.554   1.312  H10  D74  25  
D74  H11  H11  H  0  1  N  N  N  -10.016  -0.266   3.503   1.614  -2.852   1.357  H11  D74  26  
D74  H12  H12  H  0  1  N  N  N  -11.023  -0.132   2.225   0.124  -2.764   0.624  H12  D74  27  
D74  H14  H14  H  0  1  N  N  N  -13.479   1.013  -1.758  -2.371   2.254   1.956  H14  D74  28  
D74  H15  H15  H  0  1  N  N  N  -14.372   3.122  -0.864  -4.419   1.248   1.032  H15  D74  29  
D74  H16  H16  H  0  1  N  N  N  -13.748   4.679   1.785  -4.935  -0.136  -1.704  H16  D74  30  
D74  H17  H17  H  0  1  N  N  N  -12.346   5.539   1.064  -4.416  -1.733  -1.114  H17  D74  31  
D74  H18  H18  H  0  1  N  N  N  -13.849   5.313   0.107  -5.404  -0.678  -0.075  H18  D74  32  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D74  C3   C4   DOUB  Y  N   1  
D74  C3   C2   SING  Y  N   2  
D74  C4   C5   SING  Y  N   3  
D74  C2   C1   DOUB  Y  N   4  
D74  C5   C7   SING  N  N   5  
D74  C5   C6   DOUB  Y  N   6  
D74  C1   C6   SING  Y  N   7  
D74  C1   C    SING  N  N   8  
D74  C8   C7   SING  N  N   9  
D74  C8   C9   SING  N  N  10  
D74  C7   C11  SING  N  N  11  
D74  C9   C10  SING  N  N  12  
D74  C9   O1   SING  N  N  13  
D74  C11  C10  SING  N  N  14  
D74  C11  N    SING  N  N  15  
D74  C10  O    SING  N  N  16  
D74  C4   H1   SING  N  N  17  
D74  C6   H2   SING  N  N  18  
D74  C7   H3   SING  N  N  19  
D74  C8   H4   SING  N  N  20  
D74  C8   H5   SING  N  N  21  
D74  C9   H6   SING  N  N  22  
D74  C10  H7   SING  N  N  23  
D74  C11  H8   SING  N  N  24  
D74  O1   H9   SING  N  N  25  
D74  O    H10  SING  N  N  26  
D74  N    H11  SING  N  N  27  
D74  N    H12  SING  N  N  28  
D74  C3   H14  SING  N  N  29  
D74  C2   H15  SING  N  N  30  
D74  C    H16  SING  N  N  31  
D74  C    H17  SING  N  N  32  
D74  C    H18  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
D74  SMILES            ACDLabs               12.01  "c2c(C1C(C(C(C1)O)O)N)cc(cc2)C"  
D74  InChI             InChI                 1.03   "InChI=1S/C12H17NO2/c1-7-3-2-4-8(5-7)9-6-10(14)12(15)11(9)13/h2-5,9-12,14-15H,6,13H2,1H3/t9-,10-,11-,12-/m1/s1"  
D74  InChIKey          InChI                 1.03   XKVIKQNAZKXWES-DDHJBXDOSA-N  
D74  SMILES_CANONICAL  CACTVS                3.385  "Cc1cccc(c1)[C@H]2C[C@@H](O)[C@@H](O)[C@@H]2N"  
D74  SMILES            CACTVS                3.385  "Cc1cccc(c1)[CH]2C[CH](O)[CH](O)[CH]2N"  
D74  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "Cc1cccc(c1)[C@H]2C[C@H]([C@H]([C@@H]2N)O)O"  
D74  SMILES            "OpenEye OEToolkits"  2.0.6  "Cc1cccc(c1)C2CC(C(C2N)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
D74  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1R,2S,3R,4R)-3-amino-4-(3-methylphenyl)cyclopentane-1,2-diol"  
D74  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(1~{R},2~{S},3~{R},4~{R})-3-azanyl-4-(3-methylphenyl)cyclopentane-1,2-diol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
D74  "Create component"  2017-10-20  RCSB  
D74  "Initial release"   2020-04-22  RCSB  
##
