data_574
# 
_chem_comp.id                                    574 
_chem_comp.name                                  "[(3aS,4R,6R,6aR)-2-{2-[(1S)-2-amino-1-hydroxyethyl]phenyl}-6-(6-amino-9H-purin-9-yl)tetrahydrofuro[3,4-d][1,3,2]dioxaborol-4-yl]methyl dihydrogen phosphite" 
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C18 H22 B N6 O8 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-01-21 
_chem_comp.pdbx_modified_date                    2013-04-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        492.187 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     574 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3ZJT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
574 B      B      B 0 1 N N N 28.600 27.391 32.380 0.998  2.203  0.244  B      574 1  
574 P      P      P 0 1 N N N 21.626 27.084 31.914 -6.064 0.626  0.061  P      574 2  
574 N1     N1     N 0 1 Y N N 24.247 33.792 28.473 3.137  -4.726 0.776  N1     574 3  
574 O1     O1     O 0 1 N N N 29.889 27.689 33.199 5.194  1.538  0.750  O1     574 4  
574 C2     C2     C 0 1 Y N N 24.662 32.665 27.865 3.084  -3.585 1.438  C2     574 5  
574 N3     N3     N 0 1 Y N N 25.126 31.645 28.596 2.111  -2.714 1.268  N3     574 6  
574 C4     C4     C 0 1 Y N N 25.179 31.711 29.945 1.127  -2.956 0.408  C4     574 7  
574 C5     C5     C 0 1 Y N N 24.751 32.861 30.592 1.138  -4.158 -0.321 C5     574 8  
574 C6     C6     C 0 1 Y N N 24.262 33.909 29.830 2.198  -5.055 -0.105 C6     574 9  
574 N6     N6     N 0 1 N N N 23.826 35.043 30.434 2.262  -6.253 -0.794 N6     574 10 
574 N7     N7     N 0 1 Y N N 24.934 32.694 31.910 0.039  -4.154 -1.113 N7     574 11 
574 C8     C8     C 0 1 Y N N 25.437 31.454 32.075 -0.629 -3.054 -0.922 C8     574 12 
574 N9     N9     N 0 1 Y N N 25.567 30.840 30.877 0.002  -2.282 0.008  N9     574 13 
574 "C1'"  "C1'"  C 0 1 N N R 26.262 29.540 30.646 -0.442 -0.972 0.492  "C1'"  574 14 
574 C10    C10    C 0 1 N N S 30.955 26.768 32.929 3.867  1.572  0.221  C10    574 15 
574 C11    C11    C 0 1 Y N N 30.294 25.747 32.075 3.432  3.005  0.048  C11    574 16 
574 C12    C12    C 0 1 Y N N 28.996 26.085 31.764 2.076  3.329  0.056  C12    574 17 
574 C13    C13    C 0 1 Y N N 30.863 24.566 31.585 4.375  3.999  -0.113 C13    574 18 
574 C14    C14    C 0 1 Y N N 30.088 23.721 30.791 3.977  5.314  -0.272 C14    574 19 
574 C15    C15    C 0 1 Y N N 28.771 24.059 30.480 2.633  5.641  -0.270 C15    574 20 
574 C16    C16    C 0 1 Y N N 28.212 25.251 30.975 1.681  4.656  -0.105 C16    574 21 
574 C17    C17    C 0 1 N N N 31.955 27.583 32.086 3.841  0.864  -1.135 C17    574 22 
574 N18    N18    N 0 1 N N N 31.300 28.219 30.948 4.148  -0.561 -0.950 N18    574 23 
574 O1P    O1P    O 0 1 N N N 21.410 27.562 33.326 -6.366 -0.216 -1.277 O1P    574 24 
574 "C2'"  "C2'"  C 0 1 N N R 27.242 29.322 31.812 0.193  0.155  -0.351 "C2'"  574 25 
574 "O2'"  "O2'"  O 0 1 N N N 28.383 28.541 31.448 1.223  0.798  0.426  "O2'"  574 26 
574 O2P    O2P    O 0 1 N Y N 21.212 25.714 31.468 -6.996 0.086  1.257  O2P    574 27 
574 "C3'"  "C3'"  C 0 1 N N S 26.480 28.465 32.802 -0.936 1.222  -0.458 "C3'"  574 28 
574 "O3'"  "O3'"  O 0 1 N N N 27.373 27.465 33.266 -0.428 2.354  0.277  "O3'"  574 29 
574 "C4'"  "C4'"  C 0 1 N N R 25.437 27.793 31.939 -2.107 0.602  0.334  "C4'"  574 30 
574 "O4'"  "O4'"  O 0 1 N N N 25.414 28.433 30.668 -1.867 -0.821 0.301  "O4'"  574 31 
574 "C5'"  "C5'"  C 0 1 N N N 24.045 27.911 32.516 -3.440 0.933  -0.341 "C5'"  574 32 
574 "O5'"  "O5'"  O 0 1 N N N 23.195 27.289 31.573 -4.516 0.451  0.467  "O5'"  574 33 
574 HO1    HO1    H 0 1 N N N 30.211 28.394 33.748 5.852  1.970  0.190  HO1    574 34 
574 H2     H2     H 0 1 N N N 24.620 32.584 26.789 3.868  -3.357 2.144  H2     574 35 
574 HN6    HN6    H 0 1 N N N 23.526 35.697 29.739 2.999  -6.865 -0.636 HN6    574 36 
574 HN6A   HN6A   H 0 0 N N N 23.060 34.825 31.039 1.570  -6.482 -1.435 HN6A   574 37 
574 H8     H8     H 0 1 N N N 25.698 31.015 33.026 -1.548 -2.791 -1.425 H8     574 38 
574 "H1'"  "H1'"  H 0 1 N N N 26.829 29.586 29.704 -0.186 -0.851 1.544  "H1'"  574 39 
574 H10    H10    H 0 1 N N N 31.419 26.343 33.831 3.188  1.067  0.908  H10    574 40 
574 H13    H13    H 0 1 N N N 31.887 24.313 31.818 5.426  3.749  -0.115 H13    574 41 
574 H14    H14    H 0 1 N N N 30.510 22.800 30.415 4.719  6.089  -0.397 H14    574 42 
574 H15    H15    H 0 1 N N N 28.179 23.404 29.858 2.328  6.670  -0.394 H15    574 43 
574 H16    H16    H 0 1 N N N 27.190 25.514 30.746 0.632  4.911  -0.104 H16    574 44 
574 H17    H17    H 0 1 N N N 32.406 28.361 32.720 2.851  0.967  -1.580 H17    574 45 
574 H17A   H17A   H 0 0 N N N 32.742 26.910 31.715 4.583  1.313  -1.794 H17A   574 46 
574 HN18   HN18   H 0 0 N N N 31.974 28.739 30.423 4.137  -1.051 -1.831 HN18   574 47 
574 HN1A   HN1A   H 0 0 N N N 30.891 27.518 30.364 5.033  -0.681 -0.480 HN1A   574 48 
574 HO1P   HO1P   H 0 0 N N N 21.736 28.450 33.414 -6.199 -1.165 -1.191 HO1P   574 49 
574 "H2'"  "H2'"  H 0 1 N N N 27.525 30.284 32.263 0.544  -0.191 -1.323 "H2'"  574 50 
574 HO2P   HO2P   H 0 0 N N N 20.292 25.582 31.663 -7.944 0.160  1.081  HO2P   574 51 
574 "H3'"  "H3'"  H 0 1 N N N 26.029 29.064 33.607 -1.193 1.467  -1.488 "H3'"  574 52 
574 "H4'"  "H4'"  H 0 1 N N N 25.692 26.729 31.827 -2.104 0.965  1.362  "H4'"  574 53 
574 "H5'"  "H5'"  H 0 1 N N N 23.985 27.396 33.486 -3.529 2.013  -0.459 "H5'"  574 54 
574 "H5'A" "H5'A" H 0 0 N N N 23.770 28.968 32.644 -3.479 0.456  -1.320 "H5'A" 574 55 
574 O3P    O3P    O 0 1 N N N ?      ?      ?      -6.352 2.057  -0.181 O3P    574 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
574 "O2'" B      SING N N 1  
574 C12   B      SING N N 2  
574 B     "O3'"  SING N N 3  
574 O2P   P      SING N N 4  
574 "O5'" P      SING N N 5  
574 P     O1P    SING N N 6  
574 C2    N1     DOUB Y N 7  
574 N1    C6     SING Y N 8  
574 C10   O1     SING N N 9  
574 O1    HO1    SING N N 10 
574 C2    N3     SING Y N 11 
574 C2    H2     SING N N 12 
574 N3    C4     DOUB Y N 13 
574 C4    C5     SING Y N 14 
574 C4    N9     SING Y N 15 
574 C6    C5     DOUB Y N 16 
574 C5    N7     SING Y N 17 
574 C6    N6     SING N N 18 
574 N6    HN6    SING N N 19 
574 N6    HN6A   SING N N 20 
574 N7    C8     DOUB Y N 21 
574 N9    C8     SING Y N 22 
574 C8    H8     SING N N 23 
574 "C1'" N9     SING N N 24 
574 "C1'" "O4'"  SING N N 25 
574 "C1'" "C2'"  SING N N 26 
574 "C1'" "H1'"  SING N N 27 
574 C11   C10    SING N N 28 
574 C17   C10    SING N N 29 
574 C10   H10    SING N N 30 
574 C13   C11    DOUB Y N 31 
574 C12   C11    SING Y N 32 
574 C16   C12    DOUB Y N 33 
574 C14   C13    SING Y N 34 
574 C13   H13    SING N N 35 
574 C15   C14    DOUB Y N 36 
574 C14   H14    SING N N 37 
574 C15   C16    SING Y N 38 
574 C15   H15    SING N N 39 
574 C16   H16    SING N N 40 
574 N18   C17    SING N N 41 
574 C17   H17    SING N N 42 
574 C17   H17A   SING N N 43 
574 N18   HN18   SING N N 44 
574 N18   HN1A   SING N N 45 
574 O1P   HO1P   SING N N 46 
574 "O2'" "C2'"  SING N N 47 
574 "C2'" "C3'"  SING N N 48 
574 "C2'" "H2'"  SING N N 49 
574 O2P   HO2P   SING N N 50 
574 "C4'" "C3'"  SING N N 51 
574 "C3'" "O3'"  SING N N 52 
574 "C3'" "H3'"  SING N N 53 
574 "O4'" "C4'"  SING N N 54 
574 "C4'" "C5'"  SING N N 55 
574 "C4'" "H4'"  SING N N 56 
574 "O5'" "C5'"  SING N N 57 
574 "C5'" "H5'"  SING N N 58 
574 "C5'" "H5'A" SING N N 59 
574 P     O3P    DOUB N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
574 SMILES           ACDLabs              12.01 "O1B(OC4C1C(OC4n2c3ncnc(N)c3nc2)COP(O)O)c5ccccc5C(O)CN" 
574 InChI            InChI                1.03  
"InChI=1S/C18H22BN6O7P/c20-5-11(26)9-3-1-2-4-10(9)19-31-14-12(6-29-33(27)28)30-18(15(14)32-19)25-8-24-13-16(21)22-7-23-17(13)25/h1-4,7-8,11-12,14-15,18,26-28H,5-6,20H2,(H2,21,22,23)/t11-,12-,14-,15-,18-/m1/s1" 
574 InChIKey         InChI                1.03  ZBTZRXPTMKSTOB-AJKMGBEJSA-N 
574 SMILES_CANONICAL CACTVS               3.370 "NC[C@@H](O)c1ccccc1B2O[C@@H]3[C@@H](CO[P](O)(O)=O)O[C@H]([C@@H]3O2)n4cnc5c(N)ncnc45" 
574 SMILES           CACTVS               3.370 "NC[CH](O)c1ccccc1B2O[CH]3[CH](CO[P](O)(O)=O)O[CH]([CH]3O2)n4cnc5c(N)ncnc45" 
574 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "B1(O[C@@H]2[C@H](O[C@H]([C@@H]2O1)n3cnc4c3ncnc4N)COP(=O)(O)O)c5ccccc5[C@@H](CN)O" 
574 SMILES           "OpenEye OEToolkits" 1.7.6 "B1(OC2C(OC(C2O1)n3cnc4c3ncnc4N)COP(=O)(O)O)c5ccccc5C(CN)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
574 "SYSTEMATIC NAME" ACDLabs              12.01 "[(3aS,4R,6R,6aR)-2-{2-[(1S)-2-amino-1-hydroxyethyl]phenyl}-6-(6-amino-9H-purin-9-yl)tetrahydrofuro[3,4-d][1,3,2]dioxaborol-4-yl]methyl dihydrogen phosphite"           
574 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(3aR,4R,6R,6aS)-4-(6-aminopurin-9-yl)-2-[2-[(1S)-2-azanyl-1-oxidanyl-ethyl]phenyl]-3a,4,6,6a-tetrahydrofuro[3,4-d][1,3,2]dioxaborol-6-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
574 "Create component" 2013-01-21 EBI  
574 "Initial release"  2013-04-17 RCSB 
# 
