data_474
#

_chem_comp.id                                   474
_chem_comp.name                                 "(2S,3S)-3-AMINO-4-(3,3-DIFLUOROPYRROLIDIN-1-YL)-N,N-DIMETHYL-4-OXO-2-(TRANS-4-[1,2,4]TRIAZOLO[1,5-A]PYRIDIN-6-YLCYCLOHEXYL)BUTANAMIDE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H30 F2 N6 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "6-(4-{(1S,2S)-2-AMMONIO-3-(3,3-DIFLUOROPYRROLIDIN-1-YL)-1-[(DIMETHYLAMINO)CARBONYL] -3-OXOPROPYL}CYCLOHEXYL)[1,2,4]TRIAZOLO[1,5-A]PYRIDIN-1-IUM"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-09-05
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       448.509
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    474
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2QTB
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
474  C1    C1    C  0  1  N  N  S  39.460  51.474  36.307  -1.385   1.447   0.064  C1    474   1  
474  C2    C2    C  0  1  N  N  S  38.349  51.084  35.283  -2.174   1.189  -1.221  C2    474   2  
474  C3    C3    C  0  1  N  N  N  36.934  51.222  35.891  -3.650   1.286  -0.933  C3    474   3  
474  N4    N4    N  0  1  N  N  N  36.134  50.115  35.865  -4.408   0.172  -0.916  N4    474   4  
474  C5    C5    C  0  1  N  N  N  39.662  50.503  37.312  -1.758   0.416   1.098  C5    474   5  
474  N6    N6    N  0  1  N  N  N  38.335  51.922  34.080  -1.805   2.189  -2.231  N6    474   6  
474  O7    O7    O  0  1  N  N  N  36.565  52.283  36.369  -4.156   2.367  -0.716  O7    474   7  
474  O8    O8    O  0  1  N  N  N  39.669  49.341  36.867  -1.660  -0.765   0.840  O8    474   8  
474  N9    N9    N  0  1  N  N  N  39.841  50.743  38.684  -2.200   0.806   2.310  N9    474   9  
474  C10   C10   C  0  1  N  N  N  39.840  52.053  39.365  -2.473  -0.192   3.347  C10   474  10  
474  C14   C14   C  0  1  N  N  N  40.049  49.540  39.521  -2.408   2.229   2.591  C14   474  11  
474  C18   C18   C  0  1  N  N  N  36.468  48.775  35.341  -3.914  -1.207  -1.082  C18   474  12  
474  C19   C19   C  0  1  N  N  N  35.221  47.969  35.621  -4.976  -2.096  -0.389  C19   474  13  
474  C20   C20   C  0  1  N  N  N  34.137  49.000  35.629  -6.289  -1.354  -0.752  C20   474  14  
474  C21   C21   C  0  1  N  N  N  34.775  50.158  36.393  -5.865   0.130  -0.721  C21   474  15  
474  F28   F28   F  0  1  N  N  N  35.312  47.443  36.859  -4.781  -2.121   0.997  F28   474  16  
474  C29   C29   C  0  1  N  N  N  43.915  51.570  35.235   2.727   0.108   0.212  C29   474  17  
474  C30   C30   C  0  1  N  N  N  43.212  52.743  35.965   2.400   1.496   0.766  C30   474  18  
474  C31   C31   C  0  1  N  N  N  41.906  52.370  36.639   0.901   1.587   1.061  C31   474  19  
474  C32   C32   C  0  1  N  N  N  40.865  51.830  35.616   0.113   1.356  -0.230  C32   474  20  
474  C33   C33   C  0  1  N  N  N  41.539  50.619  34.828   0.440  -0.032  -0.785  C33   474  21  
474  C34   C34   C  0  1  N  N  N  42.909  50.993  34.184   1.939  -0.123  -1.079  C34   474  22  
474  C48   C48   C  0  1  Y  N  N  47.928  52.338  33.703   6.892  -0.160  -0.592  C48   474  23  
474  C49   C49   C  0  1  Y  N  N  46.835  52.723  32.765   6.125   0.814  -1.256  C49   474  24  
474  C50   C50   C  0  1  Y  N  N  45.541  52.544  33.161   4.790   0.900  -0.998  C50   474  25  
474  C51   C51   C  0  1  Y  N  N  45.238  51.889  34.487   4.203   0.018  -0.078  C51   474  26  
474  C52   C52   C  0  1  Y  N  N  46.237  51.518  35.343   4.958  -0.911   0.550  C52   474  27  
474  N53   N53   N  0  1  Y  N  N  47.647  51.712  34.878   6.291  -1.004   0.299  N53   474  28  
474  N54   N54   N  0  1  Y  N  N  48.702  51.468  35.508   7.301  -1.849   0.781  N54   474  29  
474  C55   C55   C  0  1  Y  N  N  49.696  51.871  34.693   8.416  -1.493   0.187  C55   474  30  
474  N56   N56   N  0  1  Y  N  N  49.251  52.413  33.533   8.180  -0.483  -0.637  N56   474  31  
474  F62   F62   F  0  1  N  N  N  35.035  47.002  34.723  -4.969  -3.391  -0.918  F62   474  32  
474  HN61  1HN6  H  0  0  N  N  N  38.332  52.886  34.345  -2.264   2.002  -3.110  HN61  474  33  
474  HN62  2HN6  H  0  0  N  N  N  39.148  51.730  33.531  -2.011   3.122  -1.908  HN62  474  34  
474  H2    H2    H  0  1  N  N  N  38.592  50.044  35.021  -1.942   0.191  -1.595  H2    474  35  
474  H211  1H21  H  0  0  N  N  N  34.742  50.012  37.483  -6.123   0.571   0.242  H211  474  36  
474  H212  2H21  H  0  0  N  N  N  34.267  51.124  36.258  -6.362   0.673  -1.525  H212  474  37  
474  H201  1H20  H  0  0  N  N  N  33.848  49.295  34.610  -6.631  -1.640  -1.747  H201  474  38  
474  H202  2H20  H  0  0  N  N  N  33.203  48.642  36.087  -7.061  -1.548  -0.007  H202  474  39  
474  H181  1H18  H  0  0  N  N  N  36.695  48.807  34.265  -3.841  -1.458  -2.140  H181  474  40  
474  H182  2H18  H  0  0  N  N  N  37.367  48.346  35.807  -2.945  -1.324  -0.596  H182  474  41  
474  H1    H1    H  0  1  N  N  N  39.070  52.385  36.784  -1.622   2.442   0.442  H1    474  42  
474  H101  1H10  H  0  0  N  N  N  39.840  51.901  40.454  -1.570  -0.364   3.933  H101  474  43  
474  H102  2H10  H  0  0  N  N  N  40.738  52.618  39.074  -3.267   0.169   4.000  H102  474  44  
474  H103  3H10  H  0  0  N  N  N  38.941  52.617  39.074  -2.785  -1.126   2.879  H103  474  45  
474  H141  1H14  H  0  0  N  N  N  40.101  48.649  38.877  -3.209   2.611   1.958  H141  474  46  
474  H142  2H14  H  0  0  N  N  N  40.990  49.642  40.082  -2.680   2.357   3.639  H142  474  47  
474  H143  3H14  H  0  0  N  N  N  39.211  49.435  40.226  -1.489   2.778   2.385  H143  474  48  
474  H32   H32   H  0  1  N  N  N  40.599  52.609  34.887   0.386   2.114  -0.964  H32   474  49  
474  H311  1H31  H  0  0  N  N  N  42.105  51.588  37.387   0.628   0.829   1.794  H311  474  50  
474  H312  2H31  H  0  0  N  N  N  41.490  53.274  37.109   0.668   2.576   1.456  H312  474  51  
474  H301  1H30  H  0  0  N  N  N  43.897  53.116  36.741   2.962   1.661   1.686  H301  474  52  
474  H302  2H30  H  0  0  N  N  N  42.969  53.493  35.198   2.673   2.254   0.033  H302  474  53  
474  H29   H29   H  0  1  N  N  N  44.202  50.873  36.036   2.454  -0.650   0.945  H29   474  54  
474  H52   H52   H  0  1  N  N  N  46.018  51.102  36.315   4.498  -1.586   1.257  H52   474  55  
474  H55   H55   H  0  1  N  N  N  50.743  51.772  34.939   9.380  -1.954   0.345  H55   474  56  
474  H49   H49   H  0  1  N  N  N  47.062  53.135  31.793   6.589   1.487  -1.962  H49   474  57  
474  H50   H50   H  0  1  N  N  N  44.732  52.872  32.524   4.187   1.643  -1.500  H50   474  58  
474  H341  1H34  H  0  0  N  N  N  42.736  51.754  33.409   2.212   0.635  -1.813  H341  474  59  
474  H342  2H34  H  0  0  N  N  N  43.347  50.077  33.760   2.172  -1.112  -1.474  H342  474  60  
474  H331  1H33  H  0  0  N  N  N  41.705  49.796  35.538   0.167  -0.790  -0.051  H331  474  61  
474  H332  2H33  H  0  0  N  N  N  40.857  50.337  34.012  -0.121  -0.197  -1.704  H332  474  62  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
474  C1   C2    SING  N  N   1  
474  C1   H1    SING  N  N   2  
474  C1   C5    SING  N  N   3  
474  C1   C32   SING  N  N   4  
474  C2   N6    SING  N  N   5  
474  C2   H2    SING  N  N   6  
474  C2   C3    SING  N  N   7  
474  C3   O7    DOUB  N  N   8  
474  C3   N4    SING  N  N   9  
474  N4   C21   SING  N  N  10  
474  N4   C18   SING  N  N  11  
474  C5   O8    DOUB  N  N  12  
474  C5   N9    SING  N  N  13  
474  N6   HN61  SING  N  N  14  
474  N6   HN62  SING  N  N  15  
474  N9   C10   SING  N  N  16  
474  N9   C14   SING  N  N  17  
474  C10  H101  SING  N  N  18  
474  C10  H102  SING  N  N  19  
474  C10  H103  SING  N  N  20  
474  C14  H141  SING  N  N  21  
474  C14  H142  SING  N  N  22  
474  C14  H143  SING  N  N  23  
474  C18  C19   SING  N  N  24  
474  C18  H181  SING  N  N  25  
474  C18  H182  SING  N  N  26  
474  C19  C20   SING  N  N  27  
474  C19  F62   SING  N  N  28  
474  C19  F28   SING  N  N  29  
474  C20  C21   SING  N  N  30  
474  C20  H201  SING  N  N  31  
474  C20  H202  SING  N  N  32  
474  C21  H211  SING  N  N  33  
474  C21  H212  SING  N  N  34  
474  C29  C30   SING  N  N  35  
474  C29  H29   SING  N  N  36  
474  C29  C51   SING  N  N  37  
474  C29  C34   SING  N  N  38  
474  C30  C31   SING  N  N  39  
474  C30  H301  SING  N  N  40  
474  C30  H302  SING  N  N  41  
474  C31  C32   SING  N  N  42  
474  C31  H311  SING  N  N  43  
474  C31  H312  SING  N  N  44  
474  C32  H32   SING  N  N  45  
474  C32  C33   SING  N  N  46  
474  C33  C34   SING  N  N  47  
474  C33  H331  SING  N  N  48  
474  C33  H332  SING  N  N  49  
474  C34  H341  SING  N  N  50  
474  C34  H342  SING  N  N  51  
474  C48  N53   SING  Y  N  52  
474  C48  N56   DOUB  Y  N  53  
474  C48  C49   SING  Y  N  54  
474  C49  H49   SING  N  N  55  
474  C49  C50   DOUB  Y  N  56  
474  C50  C51   SING  Y  N  57  
474  C50  H50   SING  N  N  58  
474  C51  C52   DOUB  Y  N  59  
474  C52  H52   SING  N  N  60  
474  C52  N53   SING  Y  N  61  
474  N53  N54   SING  Y  N  62  
474  N54  C55   DOUB  Y  N  63  
474  C55  N56   SING  Y  N  64  
474  C55  H55   SING  N  N  65  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
474  SMILES            ACDLabs               10.04  "FC4(F)CCN(C(=O)C(N)C(C(=O)N(C)C)C3CCC(c1ccc2ncnn2c1)CC3)C4"  
474  SMILES_CANONICAL  CACTVS                3.341  "CN(C)C(=O)[C@H]([C@H](N)C(=O)N1CCC(F)(F)C1)[C@H]2CC[C@@H](CC2)c3ccc4ncnn4c3"  
474  SMILES            CACTVS                3.341  "CN(C)C(=O)[CH]([CH](N)C(=O)N1CCC(F)(F)C1)[CH]2CC[CH](CC2)c3ccc4ncnn4c3"  
474  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CN(C)C(=O)[C@@H](C1CCC(CC1)c2ccc3ncnn3c2)[C@@H](C(=O)N4CCC(C4)(F)F)N"  
474  SMILES            "OpenEye OEToolkits"  1.5.0  "CN(C)C(=O)C(C1CCC(CC1)c2ccc3ncnn3c2)C(C(=O)N4CCC(C4)(F)F)N"  
474  InChI             InChI                 1.03   "InChI=1S/C22H30F2N6O2/c1-28(2)20(31)18(19(25)21(32)29-10-9-22(23,24)12-29)15-5-3-14(4-6-15)16-7-8-17-26-13-27-30(17)11-16/h7-8,11,13-15,18-19H,3-6,9-10,12,25H2,1-2H3/t14-,15-,18-,19-/m0/s1"  
474  InChIKey          InChI                 1.03   JNAZOMVWUGPITI-LNMJFAINSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
474  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2S,3S)-3-amino-4-(3,3-difluoropyrrolidin-1-yl)-N,N-dimethyl-4-oxo-2-(trans-4-[1,2,4]triazolo[1,5-a]pyridin-6-ylcyclohexyl)butanamide"  
474  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2S,3S)-3-amino-4-(3,3-difluoropyrrolidin-1-yl)-N,N-dimethyl-4-oxo-2-[4-([1,2,4]triazolo[5,1-f]pyridin-6-yl)cyclohexyl]butanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
474  "Create component"   2007-09-05  RCSB  
474  "Modify descriptor"  2011-06-04  RCSB  
474  "Modify synonyms"    2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     474
_pdbx_chem_comp_synonyms.name        "6-(4-{(1S,2S)-2-AMMONIO-3-(3,3-DIFLUOROPYRROLIDIN-1-YL)-1-[(DIMETHYLAMINO)CARBONYL] -3-OXOPROPYL}CYCLOHEXYL)[1,2,4]TRIAZOLO[1,5-A]PYRIDIN-1-IUM"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
