data_YL3
# 
_chem_comp.id                                    YL3 
_chem_comp.name                                  "({[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}methyl)phosphonic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H14 N3 O3 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-07-18 
_chem_comp.pdbx_modified_date                    2014-06-20 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        335.318 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YL3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4LPH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YL3 OAT OAT O 0 1 N N N 9.464  71.508 26.823 -4.300 0.248  1.401  OAT YL3 1  
YL3 PAS PAS P 0 1 N N N 8.102  71.909 25.981 -4.344 1.374  0.251  PAS YL3 2  
YL3 OAU OAU O 0 1 N N N 7.667  73.309 26.404 -5.875 1.735  -0.088 OAU YL3 3  
YL3 OAV OAV O 0 1 N N N 8.208  71.519 24.546 -3.643 2.589  0.724  OAV YL3 4  
YL3 CAR CAR C 0 1 N N N 6.996  70.754 26.599 -3.521 0.744  -1.248 CAR YL3 5  
YL3 NAJ NAJ N 0 1 N N N 6.372  71.565 27.657 -2.099 0.528  -0.971 NAJ YL3 6  
YL3 C4  C4  C 0 1 Y N N 5.122  71.374 27.991 -1.650 -0.726 -0.598 C4  YL3 7  
YL3 N3  N3  N 0 1 Y N N 4.741  70.095 28.178 -2.496 -1.740 -0.493 N3  YL3 8  
YL3 C2  C2  C 0 1 Y N N 3.436  69.821 28.549 -2.081 -2.943 -0.138 C2  YL3 9  
YL3 N1  N1  N 0 1 Y N N 2.599  70.920 28.698 -0.821 -3.198 0.128  N1  YL3 10 
YL3 C6  C6  C 0 1 Y N N 3.060  72.178 28.494 0.110  -2.240 0.050  C6  YL3 11 
YL3 SAE SAE S 0 1 Y N N 2.285  73.543 28.634 1.843  -2.283 0.343  SAE YL3 12 
YL3 C5  C5  C 0 1 Y N N 4.328  72.464 28.128 -0.274 -0.948 -0.327 C5  YL3 13 
YL3 CAC CAC C 0 1 Y N N 4.583  73.832 27.977 0.849  -0.036 -0.368 CAC YL3 14 
YL3 CAD CAD C 0 1 Y N N 3.517  74.660 28.222 2.019  -0.580 -0.036 CAD YL3 15 
YL3 CAK CAK C 0 1 Y N N 3.355  76.057 28.169 3.303  0.153  -0.005 CAK YL3 16 
YL3 CAL CAL C 0 1 Y N N 4.392  77.030 28.218 4.478  -0.506 0.357  CAL YL3 17 
YL3 CAM CAM C 0 1 Y N N 4.138  78.417 28.124 5.673  0.184  0.383  CAM YL3 18 
YL3 CAN CAN C 0 1 Y N N 2.840  78.915 28.019 5.707  1.527  0.051  CAN YL3 19 
YL3 CAQ CAQ C 0 1 N N N 2.566  80.308 27.967 7.015  2.274  0.082  CAQ YL3 20 
YL3 CAO CAO C 0 1 Y N N 1.803  77.987 27.974 4.545  2.186  -0.309 CAO YL3 21 
YL3 CAP CAP C 0 1 Y N N 2.064  76.613 28.067 3.345  1.507  -0.344 CAP YL3 22 
YL3 H1  H1  H 0 1 N N N 10.087 71.093 26.239 -4.741 -0.578 1.159  H1  YL3 23 
YL3 H2  H2  H 0 1 N N N 7.493  73.834 25.632 -6.375 2.078  0.666  H2  YL3 24 
YL3 H3  H3  H 0 1 N N N 6.266  70.436 25.840 -3.981 -0.199 -1.546 H3  YL3 25 
YL3 H4  H4  H 0 1 N N N 7.509  69.870 27.007 -3.628 1.470  -2.054 H4  YL3 26 
YL3 H5  H5  H 0 1 N N N 6.915  71.422 28.485 -1.472 1.264  -1.050 H5  YL3 27 
YL3 H6  H6  H 0 1 N N N 3.089  68.812 28.713 -2.803 -3.743 -0.064 H6  YL3 28 
YL3 H7  H7  H 0 1 N N N 5.552  74.210 27.687 0.744  1.005  -0.636 H7  YL3 29 
YL3 H8  H8  H 0 1 N N N 5.413  76.696 28.331 4.453  -1.554 0.617  H8  YL3 30 
YL3 H9  H9  H 0 1 N N N 4.969  79.107 28.134 6.583  -0.325 0.664  H9  YL3 31 
YL3 H10 H10 H 0 1 N N N 2.424  80.693 28.988 7.495  2.207  -0.895 H10 YL3 32 
YL3 H11 H11 H 0 1 N N N 3.410  80.830 27.492 6.830  3.320  0.324  H11 YL3 33 
YL3 H12 H12 H 0 1 N N N 1.652  80.480 27.380 7.666  1.836  0.838  H12 YL3 34 
YL3 H13 H13 H 0 1 N N N 0.785  78.330 27.866 4.578  3.234  -0.567 H13 YL3 35 
YL3 H14 H14 H 0 1 N N N 1.222  75.937 28.060 2.439  2.022  -0.626 H14 YL3 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YL3 OAV PAS DOUB N N 1  
YL3 PAS OAU SING N N 2  
YL3 PAS CAR SING N N 3  
YL3 PAS OAT SING N N 4  
YL3 CAR NAJ SING N N 5  
YL3 NAJ C4  SING N N 6  
YL3 CAQ CAN SING N N 7  
YL3 CAO CAN DOUB Y N 8  
YL3 CAO CAP SING Y N 9  
YL3 CAC C5  SING Y N 10 
YL3 CAC CAD DOUB Y N 11 
YL3 C4  C5  DOUB Y N 12 
YL3 C4  N3  SING Y N 13 
YL3 CAN CAM SING Y N 14 
YL3 CAP CAK DOUB Y N 15 
YL3 CAM CAL DOUB Y N 16 
YL3 C5  C6  SING Y N 17 
YL3 CAK CAL SING Y N 18 
YL3 CAK CAD SING N N 19 
YL3 N3  C2  DOUB Y N 20 
YL3 CAD SAE SING Y N 21 
YL3 C6  SAE SING Y N 22 
YL3 C6  N1  DOUB Y N 23 
YL3 C2  N1  SING Y N 24 
YL3 OAT H1  SING N N 25 
YL3 OAU H2  SING N N 26 
YL3 CAR H3  SING N N 27 
YL3 CAR H4  SING N N 28 
YL3 NAJ H5  SING N N 29 
YL3 C2  H6  SING N N 30 
YL3 CAC H7  SING N N 31 
YL3 CAL H8  SING N N 32 
YL3 CAM H9  SING N N 33 
YL3 CAQ H10 SING N N 34 
YL3 CAQ H11 SING N N 35 
YL3 CAQ H12 SING N N 36 
YL3 CAO H13 SING N N 37 
YL3 CAP H14 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YL3 SMILES           ACDLabs              12.01 "O=P(O)(O)CNc1ncnc2sc(cc12)c3ccc(cc3)C"                                                                                           
YL3 InChI            InChI                1.03  "InChI=1S/C14H14N3O3PS/c1-9-2-4-10(5-3-9)12-6-11-13(17-8-21(18,19)20)15-7-16-14(11)22-12/h2-7H,8H2,1H3,(H,15,16,17)(H2,18,19,20)" 
YL3 InChIKey         InChI                1.03  XFTKJMGEXNVSAO-UHFFFAOYSA-N                                                                                                       
YL3 SMILES_CANONICAL CACTVS               3.385 "Cc1ccc(cc1)c2sc3ncnc(NC[P](O)(O)=O)c3c2"                                                                                         
YL3 SMILES           CACTVS               3.385 "Cc1ccc(cc1)c2sc3ncnc(NC[P](O)(O)=O)c3c2"                                                                                         
YL3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1ccc(cc1)c2cc3c(ncnc3s2)NCP(=O)(O)O"                                                                                           
YL3 SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1ccc(cc1)c2cc3c(ncnc3s2)NCP(=O)(O)O"                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YL3 "SYSTEMATIC NAME" ACDLabs              12.01 "({[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino}methyl)phosphonic acid" 
YL3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[[6-(4-methylphenyl)thieno[2,3-d]pyrimidin-4-yl]amino]methylphosphonic acid"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YL3 "Create component" 2013-07-18 RCSB 
YL3 "Initial release"  2014-06-25 RCSB 
# 
