data_YI3
# 
_chem_comp.id                                    YI3 
_chem_comp.name                                  "(1R,3R,7E,9beta,17beta)-9-butyl-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9,10-secoestra-5,7-diene-1,3-diol" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H52 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-06-06 
_chem_comp.pdbx_modified_date                    2013-05-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        460.732 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YI3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3VT8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YI3 O03 O03 O 0 1 N N N 9.467  -2.595 28.398 -8.269 0.351  1.229  O03 YI3 1  
YI3 C25 C25 C 0 1 N N N 8.752  -1.725 27.512 -7.953 1.327  0.233  C25 YI3 2  
YI3 C26 C26 C 0 1 N N N 7.808  -0.870 28.363 -9.203 1.635  -0.593 C26 YI3 3  
YI3 C27 C27 C 0 1 N N N 7.956  -2.580 26.518 -7.461 2.607  0.911  C27 YI3 4  
YI3 C24 C24 C 0 1 N N N 9.842  -0.880 26.799 -6.857 0.782  -0.685 C24 YI3 5  
YI3 C23 C23 C 0 1 N N N 10.612 0.173  27.625 -5.606 0.474  0.141  C23 YI3 6  
YI3 C22 C22 C 0 1 N N N 12.041 0.295  27.078 -4.510 -0.070 -0.777 C22 YI3 7  
YI3 C20 C20 C 0 1 N N R 13.057 1.078  27.948 -3.260 -0.379 0.049  C20 YI3 8  
YI3 C21 C21 C 0 1 N N N 13.886 0.086  28.787 -3.564 -1.511 1.032  C21 YI3 9  
YI3 C17 C17 C 0 1 N N R 13.931 2.006  27.005 -2.124 -0.804 -0.883 C17 YI3 10 
YI3 C16 C16 C 0 1 N N N 14.459 1.283  25.728 -1.751 0.357  -1.842 C16 YI3 11 
YI3 C15 C15 C 0 1 N N N 15.102 2.372  24.855 -0.237 0.636  -1.622 C15 YI3 12 
YI3 C14 C14 C 0 1 N N R 14.816 3.636  25.708 0.277  -0.699 -1.077 C14 YI3 13 
YI3 C13 C13 C 0 1 N N R 13.440 3.380  26.410 -0.860 -1.082 -0.085 C13 YI3 14 
YI3 C18 C18 C 0 1 N N N 12.137 3.254  25.508 -0.812 -0.143 1.123  C18 YI3 15 
YI3 C12 C12 C 0 1 N N N 13.268 4.537  27.458 -0.600 -2.494 0.385  C12 YI3 16 
YI3 C11 C11 C 0 1 N N N 13.282 5.989  26.839 0.670  -2.468 1.251  C11 YI3 17 
YI3 C09 C09 C 0 1 N N R 14.439 6.256  25.824 1.876  -1.944 0.474  C09 YI3 18 
YI3 C28 C28 C 0 1 N N N 15.714 6.623  26.632 2.312  -2.995 -0.549 C28 YI3 19 
YI3 C29 C29 C 0 1 N N N 16.778 7.420  25.866 2.810  -4.243 0.183  C29 YI3 20 
YI3 C30 C30 C 0 1 N N N 18.197 6.859  26.089 3.246  -5.294 -0.840 C30 YI3 21 
YI3 C31 C31 C 0 1 N N N 18.782 7.141  27.482 3.744  -6.542 -0.109 C31 YI3 22 
YI3 C08 C08 C 0 1 N N N 14.718 4.995  24.938 1.530  -0.652 -0.253 C08 YI3 23 
YI3 C07 C07 C 0 1 N N N 14.809 5.143  23.533 2.283  0.438  -0.165 C07 YI3 24 
YI3 C06 C06 C 0 1 N N N 14.706 6.259  22.680 3.503  0.425  0.658  C06 YI3 25 
YI3 C05 C05 C 0 1 N N N 14.351 6.392  21.330 4.199  1.543  0.831  C05 YI3 26 
YI3 C10 C10 C 0 1 N N N 13.959 5.241  20.377 5.525  1.525  1.559  C10 YI3 27 
YI3 C04 C04 C 0 1 N N N 14.333 7.818  20.698 3.690  2.864  0.301  C04 YI3 28 
YI3 C03 C03 C 0 1 N N R 15.013 7.859  19.287 4.803  3.521  -0.523 C03 YI3 29 
YI3 O02 O02 O 0 1 N N N 16.437 7.814  19.456 4.389  4.826  -0.929 O02 YI3 30 
YI3 C02 C02 C 0 1 N N N 14.571 6.663  18.368 6.069  3.629  0.329  C02 YI3 31 
YI3 C01 C01 C 0 1 N N R 14.773 5.287  19.071 6.569  2.233  0.688  C01 YI3 32 
YI3 O01 O01 O 0 1 N N N 14.320 4.231  18.223 6.784  1.482  -0.509 O01 YI3 33 
YI3 H1  H1  H 0 1 N N N 9.964  -2.076 29.019 -8.587 -0.488 0.870  H1  YI3 34 
YI3 H2  H2  H 0 1 N N N 8.396  -0.265 29.069 -9.984 2.023  0.061  H2  YI3 35 
YI3 H3  H3  H 0 1 N N N 7.225  -0.206 27.708 -8.963 2.379  -1.352 H3  YI3 36 
YI3 H4  H4  H 0 1 N N N 7.125  -1.525 28.923 -9.554 0.723  -1.076 H4  YI3 37 
YI3 H5  H5  H 0 1 N N N 7.196  -3.162 27.060 -8.243 2.995  1.565  H5  YI3 38 
YI3 H6  H6  H 0 1 N N N 7.462  -1.925 25.785 -6.571 2.387  1.500  H6  YI3 39 
YI3 H7  H7  H 0 1 N N N 8.639  -3.266 25.995 -7.221 3.351  0.152  H7  YI3 40 
YI3 H8  H8  H 0 1 N N N 10.585 -1.583 26.394 -7.207 -0.130 -1.168 H8  YI3 41 
YI3 H9  H9  H 0 1 N N N 9.351  -0.348 25.971 -6.616 1.526  -1.444 H9  YI3 42 
YI3 H10 H10 H 0 1 N N N 10.104 1.145  27.547 -5.256 1.386  0.624  H10 YI3 43 
YI3 H11 H11 H 0 1 N N N 10.647 -0.139 28.679 -5.847 -0.270 0.901  H11 YI3 44 
YI3 H12 H12 H 0 1 N N N 12.434 -0.724 26.943 -4.860 -0.982 -1.260 H12 YI3 45 
YI3 H13 H13 H 0 1 N N N 11.982 0.798  26.101 -4.269 0.674  -1.536 H13 YI3 46 
YI3 H14 H14 H 0 1 N N N 12.495 1.728  28.634 -2.961 0.512  0.603  H14 YI3 47 
YI3 H15 H15 H 0 1 N N N 13.212 -0.519 29.412 -2.673 -1.731 1.621  H15 YI3 48 
YI3 H16 H16 H 0 1 N N N 14.456 -0.574 28.117 -4.373 -1.208 1.697  H16 YI3 49 
YI3 H17 H17 H 0 1 N N N 14.582 0.643  29.431 -3.863 -2.401 0.479  H17 YI3 50 
YI3 H18 H18 H 0 1 N N N 14.828 2.250  27.594 -2.414 -1.687 -1.453 H18 YI3 51 
YI3 H19 H19 H 0 1 N N N 13.628 0.804  25.190 -1.930 0.061  -2.876 H19 YI3 52 
YI3 H20 H20 H 0 1 N N N 15.206 0.523  26.001 -2.335 1.244  -1.601 H20 YI3 53 
YI3 H21 H21 H 0 1 N N N 14.623 2.434  23.867 0.252  0.882  -2.564 H21 YI3 54 
YI3 H22 H22 H 0 1 N N N 16.182 2.205  24.729 -0.095 1.432  -0.891 H22 YI3 55 
YI3 H23 H23 H 0 1 N N N 15.593 3.725  26.481 0.359  -1.436 -1.875 H23 YI3 56 
YI3 H24 H24 H 0 1 N N N 11.262 3.077  26.150 -1.081 0.866  0.809  H24 YI3 57 
YI3 H25 H25 H 0 1 N N N 11.993 4.185  24.940 -1.515 -0.488 1.880  H25 YI3 58 
YI3 H26 H26 H 0 1 N N N 12.255 2.413  24.809 0.196  -0.138 1.539  H26 YI3 59 
YI3 H27 H27 H 0 1 N N N 12.307 4.393  27.974 -1.444 -2.848 0.976  H27 YI3 60 
YI3 H28 H28 H 0 1 N N N 14.090 4.466  28.186 -0.450 -3.148 -0.474 H28 YI3 61 
YI3 H29 H29 H 0 1 N N N 13.376 6.712  27.663 0.498  -1.826 2.115  H29 YI3 62 
YI3 H30 H30 H 0 1 N N N 12.326 6.149  26.318 0.885  -3.479 1.597  H30 YI3 63 
YI3 H31 H31 H 0 1 N N N 14.164 7.100  25.175 2.696  -1.756 1.167  H31 YI3 64 
YI3 H32 H32 H 0 1 N N N 15.403 7.222  27.501 1.465  -3.259 -1.182 H32 YI3 65 
YI3 H33 H33 H 0 1 N N N 16.176 5.687  26.978 3.115  -2.591 -1.166 H33 YI3 66 
YI3 H34 H34 H 0 1 N N N 16.752 8.465  26.208 3.657  -3.979 0.816  H34 YI3 67 
YI3 H35 H35 H 0 1 N N N 16.546 7.380  24.792 2.007  -4.647 0.799  H35 YI3 68 
YI3 H36 H36 H 0 1 N N N 18.162 5.769  25.945 2.399  -5.558 -1.474 H36 YI3 69 
YI3 H37 H37 H 0 1 N N N 18.865 7.307  25.339 4.049  -4.890 -1.457 H37 YI3 70 
YI3 H38 H38 H 0 1 N N N 19.790 6.707  27.551 4.055  -7.291 -0.837 H38 YI3 71 
YI3 H39 H39 H 0 1 N N N 18.839 8.228  27.643 4.591  -6.278 0.525  H39 YI3 72 
YI3 H40 H40 H 0 1 N N N 18.135 6.690  28.249 2.941  -6.946 0.508  H40 YI3 73 
YI3 H41 H41 H 0 1 N N N 14.994 4.216  23.011 2.001  1.334  -0.698 H41 YI3 74 
YI3 H42 H42 H 0 1 N N N 14.948 7.196  23.160 3.831  -0.494 1.121  H42 YI3 75 
YI3 H43 H43 H 0 1 N N N 12.889 5.326  20.135 5.428  2.048  2.510  H43 YI3 76 
YI3 H44 H44 H 0 1 N N N 14.145 4.281  20.881 5.832  0.495  1.738  H44 YI3 77 
YI3 H45 H45 H 0 1 N N N 14.869 8.507  21.368 2.819  2.694  -0.332 H45 YI3 78 
YI3 H46 H46 H 0 1 N N N 13.288 8.145  20.595 3.416  3.512  1.133  H46 YI3 79 
YI3 H47 H47 H 0 1 N N N 14.723 8.798  18.792 5.009  2.914  -1.404 H47 YI3 80 
YI3 H48 H48 H 0 1 N N N 16.713 8.534  20.011 3.590  4.833  -1.474 H48 YI3 81 
YI3 H49 H49 H 0 1 N N N 15.170 6.683  17.446 6.838  4.156  -0.235 H49 YI3 82 
YI3 H50 H50 H 0 1 N N N 13.507 6.782  18.117 5.850  4.181  1.244  H50 YI3 83 
YI3 H51 H51 H 0 1 N N N 15.840 5.163  19.308 7.505  2.312  1.241  H51 YI3 84 
YI3 H52 H52 H 0 1 N N N 14.447 3.397  18.660 7.103  0.582  -0.357 H52 YI3 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YI3 O01 C01 SING N N 1  
YI3 C02 C01 SING N N 2  
YI3 C02 C03 SING N N 3  
YI3 C01 C10 SING N N 4  
YI3 C03 O02 SING N N 5  
YI3 C03 C04 SING N N 6  
YI3 C10 C05 SING N N 7  
YI3 C04 C05 SING N N 8  
YI3 C05 C06 DOUB N N 9  
YI3 C06 C07 SING N N 10 
YI3 C07 C08 DOUB N E 11 
YI3 C15 C14 SING N N 12 
YI3 C15 C16 SING N N 13 
YI3 C08 C14 SING N N 14 
YI3 C08 C09 SING N N 15 
YI3 C18 C13 SING N N 16 
YI3 C14 C13 SING N N 17 
YI3 C16 C17 SING N N 18 
YI3 C09 C28 SING N N 19 
YI3 C09 C11 SING N N 20 
YI3 C29 C30 SING N N 21 
YI3 C29 C28 SING N N 22 
YI3 C30 C31 SING N N 23 
YI3 C13 C17 SING N N 24 
YI3 C13 C12 SING N N 25 
YI3 C27 C25 SING N N 26 
YI3 C24 C25 SING N N 27 
YI3 C24 C23 SING N N 28 
YI3 C11 C12 SING N N 29 
YI3 C17 C20 SING N N 30 
YI3 C22 C23 SING N N 31 
YI3 C22 C20 SING N N 32 
YI3 C25 C26 SING N N 33 
YI3 C25 O03 SING N N 34 
YI3 C20 C21 SING N N 35 
YI3 O03 H1  SING N N 36 
YI3 C26 H2  SING N N 37 
YI3 C26 H3  SING N N 38 
YI3 C26 H4  SING N N 39 
YI3 C27 H5  SING N N 40 
YI3 C27 H6  SING N N 41 
YI3 C27 H7  SING N N 42 
YI3 C24 H8  SING N N 43 
YI3 C24 H9  SING N N 44 
YI3 C23 H10 SING N N 45 
YI3 C23 H11 SING N N 46 
YI3 C22 H12 SING N N 47 
YI3 C22 H13 SING N N 48 
YI3 C20 H14 SING N N 49 
YI3 C21 H15 SING N N 50 
YI3 C21 H16 SING N N 51 
YI3 C21 H17 SING N N 52 
YI3 C17 H18 SING N N 53 
YI3 C16 H19 SING N N 54 
YI3 C16 H20 SING N N 55 
YI3 C15 H21 SING N N 56 
YI3 C15 H22 SING N N 57 
YI3 C14 H23 SING N N 58 
YI3 C18 H24 SING N N 59 
YI3 C18 H25 SING N N 60 
YI3 C18 H26 SING N N 61 
YI3 C12 H27 SING N N 62 
YI3 C12 H28 SING N N 63 
YI3 C11 H29 SING N N 64 
YI3 C11 H30 SING N N 65 
YI3 C09 H31 SING N N 66 
YI3 C28 H32 SING N N 67 
YI3 C28 H33 SING N N 68 
YI3 C29 H34 SING N N 69 
YI3 C29 H35 SING N N 70 
YI3 C30 H36 SING N N 71 
YI3 C30 H37 SING N N 72 
YI3 C31 H38 SING N N 73 
YI3 C31 H39 SING N N 74 
YI3 C31 H40 SING N N 75 
YI3 C07 H41 SING N N 76 
YI3 C06 H42 SING N N 77 
YI3 C10 H43 SING N N 78 
YI3 C10 H44 SING N N 79 
YI3 C04 H45 SING N N 80 
YI3 C04 H46 SING N N 81 
YI3 C03 H47 SING N N 82 
YI3 O02 H48 SING N N 83 
YI3 C02 H49 SING N N 84 
YI3 C02 H50 SING N N 85 
YI3 C01 H51 SING N N 86 
YI3 O01 H52 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YI3 SMILES           ACDLabs              12.01 "OC3CC(=C/C=C1\C(CCCC)CCC2(C)C(C(C)CCCC(O)(C)C)CCC12)\CC(O)C3" 
YI3 InChI            InChI                1.03  
"InChI=1S/C30H52O3/c1-6-7-10-23-15-17-30(5)27(21(2)9-8-16-29(3,4)33)13-14-28(30)26(23)12-11-22-18-24(31)20-25(32)19-22/h11-12,21,23-25,27-28,31-33H,6-10,13-20H2,1-5H3/b26-12+/t21-,23-,24-,25-,27-,28+,30-/m1/s1" 
YI3 InChIKey         InChI                1.03  HGPWGYLACPHOSW-ZOBUFXTASA-N 
YI3 SMILES_CANONICAL CACTVS               3.370 "CCCC[C@@H]1CC[C@]2(C)[C@H](CC[C@H]2/C1=C/[CH]=[C@@]3C[C@@H](O)[CH2][C@H](O)C3)[C@H](C)CCCC(C)(C)O" 
YI3 SMILES           CACTVS               3.370 "CCCC[CH]1CC[C]2(C)[CH](CC[CH]2C1=C[CH]=[C]3C[CH](O)[CH2][CH](O)C3)[CH](C)CCCC(C)(C)O" 
YI3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCC[C@@H]\1CC[C@]2([C@H](/C1=C/C=C3C[C@H](C[C@@H](C3)O)O)CC[C@@H]2[C@H](C)CCCC(C)(C)O)C" 
YI3 SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCC1CCC2(C(C1=CC=C3CC(CC(C3)O)O)CCC2C(C)CCCC(C)(C)O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YI3 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,3R,7E,9beta,17beta)-9-butyl-17-[(2R)-6-hydroxy-6-methylheptan-2-yl]-9,10-secoestra-5,7-diene-1,3-diol"                                                               
YI3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(1R,3R)-5-[(2E)-2-[(1R,3aR,5R,7aR)-5-butyl-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]cyclohexane-1,3-diol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YI3 "Create component" 2012-06-06 PDBJ 
YI3 "Initial release"  2013-05-22 RCSB 
# 
