data_RE3
# 
_chem_comp.id                                    RE3 
_chem_comp.name                                  "3-[(3S)-3-hydroxy-2-oxo-2,3-dihydro-1H-indol-3-yl]-L-alanine" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C11 H12 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               TRP 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-02-03 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        236.224 
_chem_comp.one_letter_code                       W 
_chem_comp.three_letter_code                     RE3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3NZX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RE3 N    N    N 0 1 N N N Y Y N 10.540 -138.223 17.575 -2.047 -0.145 -1.645 N    RE3 1  
RE3 CA   CA   C 0 1 N N S Y N N 11.490 -138.189 16.493 -1.785 -0.376 -0.218 CA   RE3 2  
RE3 CB   CB   C 0 1 N N N N N N 12.193 -139.518 16.436 -1.026 0.820  0.361  CB   RE3 3  
RE3 CG   CG   C 0 1 N N S N N N 13.692 -139.627 16.691 0.321  0.962  -0.350 CG   RE3 4  
RE3 OG   OG   O 0 1 N N N N N N 14.130 -141.012 16.615 0.128  1.348  -1.713 OG   RE3 5  
RE3 CD1  CD1  C 0 1 N N N N N N 14.520 -138.792 15.693 1.197  1.966  0.369  CD1  RE3 6  
RE3 OD1  OD1  O 0 1 N N N N N N 14.482 -138.962 14.499 0.953  3.141  0.543  OD1  RE3 7  
RE3 NE1  NE1  N 0 1 N N N N N N 15.275 -137.867 16.343 2.296  1.309  0.779  NE1  RE3 8  
RE3 CE2  CE2  C 0 1 Y N N N N N 15.039 -137.965 17.710 2.270  -0.039 0.420  CE2  RE3 9  
RE3 CZ2  CZ2  C 0 1 Y N N N N N 15.648 -137.177 18.717 3.193  -1.059 0.644  CZ2  RE3 10 
RE3 CH2  CH2  C 0 1 Y N N N N N 15.279 -137.439 20.072 2.941  -2.334 0.183  CH2  RE3 11 
RE3 CZ3  CZ3  C 0 1 Y N N N N N 14.361 -138.481 20.382 1.773  -2.611 -0.504 CZ3  RE3 12 
RE3 CE3  CE3  C 0 1 Y N N N N N 13.753 -139.274 19.364 0.852  -1.604 -0.730 CE3  RE3 13 
RE3 CD2  CD2  C 0 1 Y N N N N N 14.128 -139.007 18.019 1.101  -0.330 -0.271 CD2  RE3 14 
RE3 C    C    C 0 1 N N N Y N Y 10.687 -137.960 15.195 -3.092 -0.543 0.513  C    RE3 15 
RE3 O    O    O 0 1 N N N Y N Y 9.697  -138.704 14.958 -4.116 -0.132 0.021  O    RE3 16 
RE3 H    HN   H 0 1 N N N Y Y N 11.023 -138.370 18.438 -2.497 0.747  -1.790 HN   RE3 17 
RE3 HA   H9   H 0 1 N N N Y N N 12.238 -137.393 16.627 -1.185 -1.278 -0.100 H9   RE3 18 
RE3 H10  H10  H 0 1 N N N N N N 11.713 -140.143 17.203 -1.612 1.727  0.215  H10  RE3 19 
RE3 H10A H10A H 0 0 N N N N N N 12.035 -139.896 15.415 -0.859 0.663  1.427  H10A RE3 20 
RE3 HOG  HOG  H 0 1 N N N N N N 14.551 -141.166 15.777 0.950  1.453  -2.212 HOG  RE3 21 
RE3 HNE1 HNE1 H 0 0 N N N N N N 15.900 -137.219 15.908 3.023  1.725  1.269  HNE1 RE3 22 
RE3 H17  H17  H 0 1 N N N N N N 16.364 -136.407 18.470 4.108  -0.850 1.179  H17  RE3 23 
RE3 H18  H18  H 0 1 N N N N N N 15.700 -136.842 20.867 3.660  -3.120 0.359  H18  RE3 24 
RE3 H19  H19  H 0 1 N N N N N N 14.118 -138.677 21.416 1.581  -3.611 -0.863 H19  RE3 25 
RE3 H20  H20  H 0 1 N N N N N N 13.037 -140.046 19.605 -0.062 -1.816 -1.266 H20  RE3 26 
RE3 H2   H2   H 0 1 N Y N Y Y N 10.047 -137.354 17.613 -1.197 -0.213 -2.184 H2   RE3 27 
RE3 OXT  OXT  O 0 1 N Y N Y N Y ?      ?        ?      -3.119 -1.148 1.710  OXT  RE3 28 
RE3 HXT  HXT  H 0 1 N Y N Y N Y ?      ?        ?      -3.981 -1.232 2.141  HXT  RE3 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RE3 CA  N    SING N N 1  
RE3 N   H    SING N N 2  
RE3 C   CA   SING N N 3  
RE3 CB  CA   SING N N 4  
RE3 CA  HA   SING N N 5  
RE3 CB  CG   SING N N 6  
RE3 CB  H10  SING N N 7  
RE3 CB  H10A SING N N 8  
RE3 CD1 CG   SING N N 9  
RE3 OG  CG   SING N N 10 
RE3 CG  CD2  SING N N 11 
RE3 OG  HOG  SING N N 12 
RE3 OD1 CD1  DOUB N N 13 
RE3 CD1 NE1  SING N N 14 
RE3 NE1 CE2  SING N N 15 
RE3 NE1 HNE1 SING N N 16 
RE3 CE2 CD2  DOUB Y N 17 
RE3 CE2 CZ2  SING Y N 18 
RE3 CZ2 CH2  DOUB Y N 19 
RE3 CZ2 H17  SING N N 20 
RE3 CH2 CZ3  SING Y N 21 
RE3 CH2 H18  SING N N 22 
RE3 CE3 CZ3  DOUB Y N 23 
RE3 CZ3 H19  SING N N 24 
RE3 CD2 CE3  SING Y N 25 
RE3 CE3 H20  SING N N 26 
RE3 O   C    DOUB N N 27 
RE3 N   H2   SING N N 28 
RE3 C   OXT  SING N N 29 
RE3 OXT HXT  SING N N 30 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RE3 SMILES           ACDLabs              12.01 "O=C(O)C(N)CC2(O)c1ccccc1NC2=O"                                                                                          
RE3 SMILES_CANONICAL CACTVS               3.370 "N[C@@H](C[C@@]1(O)C(=O)Nc2ccccc12)C(O)=O"                                                                               
RE3 SMILES           CACTVS               3.370 "N[CH](C[C]1(O)C(=O)Nc2ccccc12)C(O)=O"                                                                                   
RE3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc2c(c1)[C@](C(=O)N2)(C[C@@H](C(=O)O)N)O"                                                                            
RE3 SMILES           "OpenEye OEToolkits" 1.7.0 "c1ccc2c(c1)C(C(=O)N2)(CC(C(=O)O)N)O"                                                                                    
RE3 InChI            InChI                1.03  "InChI=1S/C11H12N2O4/c12-7(9(14)15)5-11(17)6-3-1-2-4-8(6)13-10(11)16/h1-4,7,17H,5,12H2,(H,13,16)(H,14,15)/t7-,11-/m0/s1" 
RE3 InChIKey         InChI                1.03  BZRCOYDQHJWPQZ-CPCISQLKSA-N                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RE3 "SYSTEMATIC NAME" ACDLabs              12.01 "3-[(3S)-3-hydroxy-2-oxo-2,3-dihydro-1H-indol-3-yl]-L-alanine"       
RE3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2S)-2-azanyl-3-[(3S)-3-hydroxy-2-oxo-1H-indol-3-yl]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RE3 "Create component"     2011-02-03 RCSB 
RE3 "Modify aromatic_flag" 2011-06-04 RCSB 
RE3 "Modify descriptor"    2011-06-04 RCSB 
RE3 "Modify backbone"      2023-11-03 PDBE 
RE3 "Modify PCM"           2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 RE3 TRP Oxidation     "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 
2 RE3 TRP Hydroxylation "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 
# 
