data_PA3
# 
_chem_comp.id                                    PA3 
_chem_comp.name                                  "PAROMOMYCIN (RING 3)" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H10 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-07-08 
_chem_comp.pdbx_modified_date                    2013-01-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   OBS 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        118.131 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     PA3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1PBR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
PA3 C1  C1  C 0 1 N N N 3.805 -2.264 41.291 -1.161 1.263  -0.145 C1  PA3 1  
PA3 C2  C2  C 0 1 N N R 4.258 -2.209 39.820 -1.743 -0.141 -0.399 C2  PA3 2  
PA3 O2  O2  O 0 1 N N N 5.628 -2.579 39.692 -2.560 -0.550 0.699  O2  PA3 3  
PA3 C3  C3  C 0 1 N N N 4.032 -0.713 39.554 -0.497 -1.053 -0.517 C3  PA3 4  
PA3 C4  C4  C 0 1 N N S 4.576 -0.072 40.820 0.588  -0.213 0.205  C4  PA3 5  
PA3 O4  O4  O 0 1 N N N 4.131 -0.969 41.826 0.271  1.143  -0.173 O4  PA3 6  
PA3 C5  C5  C 0 1 N N N 4.065 1.346  41.106 1.984  -0.598 -0.290 C5  PA3 7  
PA3 O5  O5  O 0 1 N N N 4.693 1.865  42.269 2.969  0.104  0.470  O5  PA3 8  
PA3 H11 H11 H 0 1 N N N 2.723 -2.449 41.356 -1.491 1.948  -0.926 H11 PA3 9  
PA3 H12 H12 H 0 1 N N N 4.345 -3.054 41.833 -1.484 1.627  0.830  H12 PA3 10 
PA3 H2  H2  H 0 1 N N N 3.598 -2.821 39.188 -2.317 -0.154 -1.326 H2  PA3 11 
PA3 HO2 HO2 H 0 1 N N N 5.884 -2.538 38.778 -3.325 0.021  0.855  HO2 PA3 12 
PA3 H31 H31 H 0 1 N N N 4.589 -0.378 38.667 -0.660 -2.001 -0.005 H31 PA3 13 
PA3 H32 H32 H 0 1 N N N 2.963 -0.489 39.422 -0.232 -1.216 -1.561 H32 PA3 14 
PA3 H4  H4  H 0 1 N N N 5.675 -0.055 40.774 0.515  -0.338 1.285  H4  PA3 15 
PA3 H51 H51 H 0 1 N N N 4.294 1.995  40.248 2.129  -1.672 -0.170 H51 PA3 16 
PA3 H52 H52 H 0 1 N N N 2.977 1.316  41.263 2.082  -0.334 -1.343 H52 PA3 17 
PA3 HO5 HO5 H 0 1 N N N 4.371 2.743  42.438 3.880  -0.092 0.210  HO5 PA3 18 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
PA3 C1 C2  SING N N 1  
PA3 C1 O4  SING N N 2  
PA3 C1 H11 SING N N 3  
PA3 C1 H12 SING N N 4  
PA3 C2 O2  SING N N 5  
PA3 C2 C3  SING N N 6  
PA3 C2 H2  SING N N 7  
PA3 O2 HO2 SING N N 8  
PA3 C3 C4  SING N N 9  
PA3 C3 H31 SING N N 10 
PA3 C3 H32 SING N N 11 
PA3 C4 O4  SING N N 12 
PA3 C4 C5  SING N N 13 
PA3 C4 H4  SING N N 14 
PA3 C5 O5  SING N N 15 
PA3 C5 H51 SING N N 16 
PA3 C5 H52 SING N N 17 
PA3 O5 HO5 SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
PA3 SMILES           ACDLabs              12.01 "OCC1OCC(O)C1"                                                 
PA3 InChI            InChI                1.03  "InChI=1S/C5H10O3/c6-2-5-1-4(7)3-8-5/h4-7H,1-3H2/t4-,5+/m1/s1" 
PA3 InChIKey         InChI                1.03  WDMXOLOBWMBITN-UHNVWZDZSA-N                                    
PA3 SMILES_CANONICAL CACTVS               3.370 "OC[C@@H]1C[C@@H](O)CO1"                                       
PA3 SMILES           CACTVS               3.370 "OC[CH]1C[CH](O)CO1"                                           
PA3 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C1[C@H](CO[C@@H]1CO)O"                                        
PA3 SMILES           "OpenEye OEToolkits" 1.7.6 "C1C(COC1CO)O"                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
PA3 "SYSTEMATIC NAME" ACDLabs              12.01 1,4-anhydro-3-deoxy-D-erythro-pentitol 
PA3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3R,5S)-5-(hydroxymethyl)oxolan-3-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
PA3 "Create component"   1999-07-08 RCSB 
PA3 "Modify descriptor"  2011-06-04 RCSB 
PA3 "Obsolete component" 2013-01-08 RCSB 
# 
