data_BE3
#

_chem_comp.id                                   BE3
_chem_comp.name                                 "N,N-[2,5-O-DI-3-FLUORO-BENZYL-GLUCARYL]-DI-[1-AMINO-INDAN-2-OL]"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C38 H38 F2 N2 O8"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "INHIBITOR BEA403"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-08-10
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       688.714
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BE3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1W5V
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BE3  C01   C01   C  0  1  Y  N  N   9.641  24.037   2.164  -4.117   1.485   1.112  C01   BE3   1  
BE3  C02   C02   C  0  1  Y  N  N   8.998  25.293   1.734  -4.908   2.383   0.419  C02   BE3   2  
BE3  C03   C03   C  0  1  Y  N  N   7.568  25.524   1.859  -5.445   3.478   1.071  C03   BE3   3  
BE3  C04   C04   C  0  1  Y  N  N   6.700  24.488   2.433  -5.191   3.676   2.415  C04   BE3   4  
BE3  C05   C05   C  0  1  Y  N  N   7.305  23.210   2.879  -4.400   2.777   3.109  C05   BE3   5  
BE3  C06   C06   C  0  1  Y  N  N   8.746  22.989   2.748  -3.867   1.678   2.457  C06   BE3   6  
BE3  C07   C07   C  0  1  Y  N  N  16.397  22.060   8.766   4.127   1.468  -1.102  C07   BE3   7  
BE3  C08   C08   C  0  1  Y  N  N  15.675  20.927   9.379   3.879   1.673  -2.445  C08   BE3   8  
BE3  C09   C09   C  0  1  Y  N  N  16.436  19.704   9.774   4.418   2.774  -3.089  C09   BE3   9  
BE3  C10   C10   C  0  1  Y  N  N  17.915  19.644   9.547   5.215   3.663  -2.388  C10   BE3  10  
BE3  C11   C11   C  0  1  Y  N  N  18.599  20.815   8.925   5.467   3.453  -1.045  C11   BE3  11  
BE3  C12   C12   C  0  1  Y  N  N  17.841  21.981   8.550   4.924   2.357  -0.403  C12   BE3  12  
BE3  C13   C13   C  0  1  N  N  N  15.702  23.324   8.322   3.536   0.273  -0.400  C13   BE3  13  
BE3  O14   O14   O  0  1  N  N  N  14.597  23.095   7.400   2.260   0.622   0.140  O14   BE3  14  
BE3  C15   C15   C  0  1  N  N  R  14.923  22.579   6.004   1.753  -0.545   0.789  C15   BE3  15  
BE3  C16   C16   C  0  1  N  N  R  13.856  22.860   4.968   0.224  -0.540   0.728  C16   BE3  16  
BE3  C17   C17   C  0  1  N  N  R  13.506  24.287   4.980  -0.226  -0.533  -0.733  C17   BE3  17  
BE3  C18   C18   C  0  1  N  N  R  12.099  24.479   4.282  -1.755  -0.528  -0.795  C18   BE3  18  
BE3  C19   C19   C  0  1  N  N  N  10.919  24.462   5.240  -2.200  -0.521  -2.235  C19   BE3  19  
BE3  O20   O20   O  0  1  N  N  N  10.674  23.451   5.932  -2.878   0.391  -2.655  O20   BE3  20  
BE3  N21   N21   N  0  1  N  N  N  10.121  25.569   5.319  -1.845  -1.530  -3.055  N21   BE3  21  
BE3  O22   O22   O  0  1  N  N  N  11.869  23.489   3.180  -2.255   0.637  -0.136  O22   BE3  22  
BE3  C23   C23   C  0  1  N  N  N  11.165  23.935   1.979  -3.533   0.292   0.400  C23   BE3  23  
BE3  O24   O24   O  0  1  N  N  N  14.578  25.044   4.362   0.272  -1.699  -1.392  O24   BE3  24  
BE3  O25   O25   O  0  1  N  N  N  14.314  22.535   3.590  -0.281  -1.708   1.377  O25   BE3  25  
BE3  C26   C26   C  0  1  N  N  N  15.066  21.101   5.861   2.198  -0.552   2.229  C26   BE3  26  
BE3  O27   O27   O  0  1  N  N  N  14.082  20.375   6.131   2.881   0.353   2.657  O27   BE3  27  
BE3  N28   N28   N  0  1  N  N  N  16.270  20.609   5.459   1.836  -1.565   3.041  N28   BE3  28  
BE3  C29   C29   C  0  1  N  N  S  16.543  19.197   5.301   2.269  -1.571   4.441  C29   BE3  29  
BE3  C30   C30   C  0  1  Y  N  N  16.498  18.813   3.862   1.231  -0.891   5.316  C30   BE3  30  
BE3  C31   C31   C  0  1  Y  N  N  17.477  17.755   3.602   1.030  -1.631   6.466  C31   BE3  31  
BE3  C32   C32   C  0  1  Y  N  N  15.652  19.333   2.775   0.521   0.281   5.119  C32   BE3  32  
BE3  C33   C33   C  0  1  Y  N  N  15.812  18.762   1.401  -0.384   0.713   6.067  C33   BE3  33  
BE3  C34   C34   C  0  1  Y  N  N  16.804  17.704   1.173  -0.585  -0.026   7.218  C34   BE3  34  
BE3  C35   C35   C  0  1  N  N  R  17.972  18.729   5.682   2.351  -3.017   4.974  C35   BE3  35  
BE3  O36   O36   O  0  1  N  N  N  18.888  19.788   5.342   1.450  -3.872   4.267  O36   BE3  36  
BE3  C37   C37   C  0  1  Y  N  N  17.647  17.184   2.259   0.121  -1.196   7.416  C37   BE3  37  
BE3  C38   C38   C  0  1  N  N  N  18.179  17.422   4.858   1.915  -2.858   6.446  C38   BE3  38  
BE3  C39   C39   C  0  1  N  N  S   8.963  25.681   6.180  -2.277  -1.523  -4.454  C39   BE3  39  
BE3  C40   C40   C  0  1  Y  N  N   9.265  26.422   7.480  -1.224  -0.873  -5.326  C40   BE3  40  
BE3  C41   C41   C  0  1  Y  N  N   8.116  27.238   7.844  -1.044  -1.623  -6.476  C41   BE3  41  
BE3  C42   C42   C  0  1  Y  N  N  10.469  26.411   8.324  -0.480   0.276  -5.131  C42   BE3  42  
BE3  C43   C43   C  0  1  Y  N  N  10.504  27.247   9.563   0.438   0.679  -6.079  C43   BE3  43  
BE3  C44   C44   C  0  1  Y  N  N   9.332  28.065   9.910   0.618  -0.067  -7.228  C44   BE3  44  
BE3  C45   C45   C  0  1  N  N  R   7.846  26.580   5.577  -2.406  -2.968  -4.982  C45   BE3  45  
BE3  O46   O46   O  0  1  N  N  N   8.493  27.667   4.869  -1.535  -3.848  -4.270  O46   BE3  46  
BE3  C47   C47   C  0  1  Y  N  N   8.130  28.076   9.068  -0.122  -1.216  -7.426  C47   BE3  47  
BE3  C48   C48   C  0  1  N  N  N   7.052  27.046   6.807  -1.965  -2.824  -6.454  C48   BE3  48  
BE3  F49   F49   F  0  1  N  N  N  15.735  18.574  10.374   4.171   2.978  -4.402  F49   BE3  49  
BE3  F50   F50   F  0  1  N  N  N   6.458  22.166   3.455  -4.152   2.969   4.423  F50   BE3  50  
BE3  H02   H02   H  0  1  N  N  N   9.627  26.089   1.300  -5.107   2.230  -0.630  H02   BE3  51  
BE3  H03   H03   H  0  1  N  N  N   7.134  26.480   1.522  -6.062   4.179   0.529  H03   BE3  52  
BE3  H04   H04   H  0  1  N  N  N   5.615  24.658   2.531  -5.611   4.532   2.924  H04   BE3  53  
BE3  H06   H06   H  0  1  N  N  N   9.180  22.033   3.086  -3.249   0.976   2.997  H06   BE3  54  
BE3  H08   H08   H  0  1  N  N  N  14.586  20.983   9.543   3.256   0.979  -2.991  H08   BE3  55  
BE3  H10   H10   H  0  1  N  N  N  18.490  18.748   9.835   5.639   4.520  -2.890  H10   BE3  56  
BE3  H11   H11   H  0  1  N  N  N  19.688  20.788   8.752   6.089   4.146  -0.498  H11   BE3  57  
BE3  H12   H12   H  0  1  N  N  N  18.363  22.836   8.088   5.121   2.194   0.646  H12   BE3  58  
BE3  H131  1H13  H  0  0  N  N  N  16.435  24.043   7.886   4.199  -0.038   0.406  H131  BE3  59  
BE3  H132  2H13  H  0  0  N  N  N  15.362  23.915   9.204   3.418  -0.543  -1.110  H132  BE3  60  
BE3  H15   H15   H  0  1  N  N  N  15.873  23.057   5.667   2.134  -1.434   0.287  H15   BE3  61  
BE3  H16   H16   H  0  1  N  N  N  12.948  22.258   5.204  -0.156   0.348   1.230  H16   BE3  62  
BE3  H17   H17   H  0  1  N  N  N  13.416  24.615   6.042   0.159   0.357  -1.229  H17   BE3  63  
BE3  H18   H18   H  0  1  N  N  N  12.112  25.488   3.808  -2.142  -1.419  -0.299  H18   BE3  64  
BE3  H21   H21   H  0  1  N  N  N  10.357  26.369   4.732  -1.302  -2.260  -2.718  H21   BE3  65  
BE3  H231  1H23  H  0  0  N  N  N  11.584  24.901   1.612  -4.198  -0.009  -0.408  H231  BE3  66  
BE3  H232  2H23  H  0  0  N  N  N  11.414  23.283   1.110  -3.421  -0.531   1.105  H232  BE3  67  
BE3  H24   H24   H  0  1  N  N  N  14.352  25.967   4.370  -0.092  -2.462  -0.923  H24   BE3  68  
BE3  H25   H25   H  0  1  N  N  N  13.644  22.711   2.940   0.078  -2.470   0.903  H25   BE3  69  
BE3  H28   H28   H  0  1  N  N  N  17.020  21.271   5.259   1.289  -2.289   2.699  H28   BE3  70  
BE3  H29   H29   H  0  1  N  N  N  15.790  18.604   5.871   3.233  -1.073   4.540  H29   BE3  71  
BE3  H32   H32   H  0  1  N  N  N  14.914  20.129   2.970   0.678   0.860   4.221  H32   BE3  72  
BE3  H33   H33   H  0  1  N  N  N  15.191  19.132   0.568  -0.936   1.629   5.910  H33   BE3  73  
BE3  H34   H34   H  0  1  N  N  N  16.920  17.288   0.158  -1.293   0.309   7.960  H34   BE3  74  
BE3  H35   H35   H  0  1  N  N  N  18.027  18.508   6.774   3.371  -3.396   4.910  H35   BE3  75  
BE3  H36   H36   H  0  1  N  N  N  19.763  19.501   5.575   1.517  -4.747   4.673  H36   BE3  76  
BE3  H37   H37   H  0  1  N  N  N  18.386  16.388   2.071  -0.036  -1.774   8.315  H37   BE3  77  
BE3  H381  1H38  H  0  0  N  N  N  17.841  16.485   5.359   1.355  -3.735   6.771  H381  BE3  78  
BE3  H382  2H38  H  0  0  N  N  N  19.239  17.096   4.740   2.786  -2.707   7.084  H382  BE3  79  
BE3  H39   H39   H  0  1  N  N  N   8.556  24.667   6.405  -3.227  -0.998  -4.554  H39   BE3  80  
BE3  H42   H42   H  0  1  N  N  N  11.338  25.792   8.046  -0.619   0.860  -4.233  H42   BE3  81  
BE3  H43   H43   H  0  1  N  N  N  11.398  27.250  10.209   1.017   1.578  -5.923  H43   BE3  82  
BE3  H44   H44   H  0  1  N  N  N   9.357  28.684  10.823   1.336   0.246  -7.971  H44   BE3  83  
BE3  H45   H45   H  0  1  N  N  N   7.196  25.992   4.888  -3.438  -3.312  -4.919  H45   BE3  84  
BE3  H46   H46   H  0  1  N  N  N   7.811  28.216   4.501  -1.662  -4.731  -4.645  H46   BE3  85  
BE3  H47   H47   H  0  1  N  N  N   7.257  28.693   9.339   0.018  -1.799  -8.324  H47   BE3  86  
BE3  H481  1H48  H  0  0  N  N  N   6.224  26.364   7.111  -1.431  -3.717  -6.778  H481  BE3  87  
BE3  H482  2H48  H  0  0  N  N  N   6.406  27.938   6.633  -2.831  -2.648  -7.093  H482  BE3  88  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BE3  C01  C02   DOUB  Y  N   1  
BE3  C01  C06   SING  Y  N   2  
BE3  C01  C23   SING  N  N   3  
BE3  C02  C03   SING  Y  N   4  
BE3  C02  H02   SING  N  N   5  
BE3  C03  C04   DOUB  Y  N   6  
BE3  C03  H03   SING  N  N   7  
BE3  C04  C05   SING  Y  N   8  
BE3  C04  H04   SING  N  N   9  
BE3  C05  C06   DOUB  Y  N  10  
BE3  C05  F50   SING  N  N  11  
BE3  C06  H06   SING  N  N  12  
BE3  C07  C08   DOUB  Y  N  13  
BE3  C07  C12   SING  Y  N  14  
BE3  C07  C13   SING  N  N  15  
BE3  C08  C09   SING  Y  N  16  
BE3  C08  H08   SING  N  N  17  
BE3  C09  C10   DOUB  Y  N  18  
BE3  C09  F49   SING  N  N  19  
BE3  C10  C11   SING  Y  N  20  
BE3  C10  H10   SING  N  N  21  
BE3  C11  C12   DOUB  Y  N  22  
BE3  C11  H11   SING  N  N  23  
BE3  C12  H12   SING  N  N  24  
BE3  C13  O14   SING  N  N  25  
BE3  C13  H131  SING  N  N  26  
BE3  C13  H132  SING  N  N  27  
BE3  O14  C15   SING  N  N  28  
BE3  C15  C16   SING  N  N  29  
BE3  C15  C26   SING  N  N  30  
BE3  C15  H15   SING  N  N  31  
BE3  C16  C17   SING  N  N  32  
BE3  C16  O25   SING  N  N  33  
BE3  C16  H16   SING  N  N  34  
BE3  C17  C18   SING  N  N  35  
BE3  C17  O24   SING  N  N  36  
BE3  C17  H17   SING  N  N  37  
BE3  C18  C19   SING  N  N  38  
BE3  C18  O22   SING  N  N  39  
BE3  C18  H18   SING  N  N  40  
BE3  C19  O20   DOUB  N  N  41  
BE3  C19  N21   SING  N  N  42  
BE3  N21  C39   SING  N  N  43  
BE3  N21  H21   SING  N  N  44  
BE3  O22  C23   SING  N  N  45  
BE3  C23  H231  SING  N  N  46  
BE3  C23  H232  SING  N  N  47  
BE3  O24  H24   SING  N  N  48  
BE3  O25  H25   SING  N  N  49  
BE3  C26  O27   DOUB  N  N  50  
BE3  C26  N28   SING  N  N  51  
BE3  N28  C29   SING  N  N  52  
BE3  N28  H28   SING  N  N  53  
BE3  C29  C30   SING  N  N  54  
BE3  C29  C35   SING  N  N  55  
BE3  C29  H29   SING  N  N  56  
BE3  C30  C31   DOUB  Y  N  57  
BE3  C30  C32   SING  Y  N  58  
BE3  C31  C37   SING  Y  N  59  
BE3  C31  C38   SING  N  N  60  
BE3  C32  C33   DOUB  Y  N  61  
BE3  C32  H32   SING  N  N  62  
BE3  C33  C34   SING  Y  N  63  
BE3  C33  H33   SING  N  N  64  
BE3  C34  C37   DOUB  Y  N  65  
BE3  C34  H34   SING  N  N  66  
BE3  C35  O36   SING  N  N  67  
BE3  C35  C38   SING  N  N  68  
BE3  C35  H35   SING  N  N  69  
BE3  O36  H36   SING  N  N  70  
BE3  C37  H37   SING  N  N  71  
BE3  C38  H381  SING  N  N  72  
BE3  C38  H382  SING  N  N  73  
BE3  C39  C40   SING  N  N  74  
BE3  C39  C45   SING  N  N  75  
BE3  C39  H39   SING  N  N  76  
BE3  C40  C41   DOUB  Y  N  77  
BE3  C40  C42   SING  Y  N  78  
BE3  C41  C47   SING  Y  N  79  
BE3  C41  C48   SING  N  N  80  
BE3  C42  C43   DOUB  Y  N  81  
BE3  C42  H42   SING  N  N  82  
BE3  C43  C44   SING  Y  N  83  
BE3  C43  H43   SING  N  N  84  
BE3  C44  C47   DOUB  Y  N  85  
BE3  C44  H44   SING  N  N  86  
BE3  C45  O46   SING  N  N  87  
BE3  C45  C48   SING  N  N  88  
BE3  C45  H45   SING  N  N  89  
BE3  O46  H46   SING  N  N  90  
BE3  C47  H47   SING  N  N  91  
BE3  C48  H481  SING  N  N  92  
BE3  C48  H482  SING  N  N  93  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BE3  SMILES            ACDLabs               10.04  "Fc1cccc(c1)COC(C(=O)NC3c2ccccc2CC3O)C(O)C(O)C(OCc4cccc(F)c4)C(=O)NC6c5ccccc5CC6O"  
BE3  SMILES_CANONICAL  CACTVS                3.341  "O[C@@H]1Cc2ccccc2[C@@H]1NC(=O)[C@H](OCc3cccc(F)c3)[C@H](O)[C@@H](O)[C@@H](OCc4cccc(F)c4)C(=O)N[C@@H]5[C@H](O)Cc6ccccc56"  
BE3  SMILES            CACTVS                3.341  "O[CH]1Cc2ccccc2[CH]1NC(=O)[CH](OCc3cccc(F)c3)[CH](O)[CH](O)[CH](OCc4cccc(F)c4)C(=O)N[CH]5[CH](O)Cc6ccccc56"  
BE3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1ccc2c(c1)C[C@H]([C@H]2NC(=O)[C@@H]([C@@H]([C@H]([C@H](C(=O)N[C@H]3c4ccccc4C[C@H]3O)OCc5cccc(c5)F)O)O)OCc6cccc(c6)F)O"  
BE3  SMILES            "OpenEye OEToolkits"  1.5.0  "c1ccc2c(c1)CC(C2NC(=O)C(C(C(C(C(=O)NC3c4ccccc4CC3O)OCc5cccc(c5)F)O)O)OCc6cccc(c6)F)O"  
BE3  InChI             InChI                 1.03   "InChI=1S/C38H38F2N2O8/c39-25-11-5-7-21(15-25)19-49-35(37(47)41-31-27-13-3-1-9-23(27)17-29(31)43)33(45)34(46)36(50-20-22-8-6-12-26(40)16-22)38(48)42-32-28-14-4-2-10-24(28)18-30(32)44/h1-16,29-36,43-46H,17-20H2,(H,41,47)(H,42,48)/t29-,30-,31+,32+,33-,34-,35-,36-/m1/s1"  
BE3  InChIKey          InChI                 1.03   FSNSRNCFARXZOP-JQFCFGFHSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BE3  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R,3R,4R,5R)-2,5-bis[(3-fluorobenzyl)oxy]-3,4-dihydroxy-N,N'-bis[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]hexanediamide (non-preferred name)"  
BE3  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R,3R,4R,5R)-2,5-bis[(3-fluorophenyl)methoxy]-3,4-dihydroxy-N,N'-bis[(1S,2R)-2-hydroxy-2,3-dihydro-1H-inden-1-yl]hexanediamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BE3  "Create component"   2004-08-10  EBI   
BE3  "Modify descriptor"  2011-06-04  RCSB  
BE3  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     BE3
_pdbx_chem_comp_synonyms.name        "INHIBITOR BEA403"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
