data_6M3
# 
_chem_comp.id                                    6M3 
_chem_comp.name                                  "2'-chloro-6-[(5S,6S)-6-hydroxy-6,7,8,9-tetrahydro-5H-imidazo[1,5-a]azepin-5-yl][1,1'-biphenyl]-3-carbonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H18 Cl N3 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-04 
_chem_comp.pdbx_modified_date                    2016-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        363.840 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6M3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JOH 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6M3 C1  C1  C  0 1 Y N N 28.484 -28.614 18.706 3.345  -0.631 -0.177 C1   6M3 1  
6M3 C3  C2  C  0 1 Y N N 27.860 -27.763 16.846 2.564  -0.919 1.844  C3   6M3 2  
6M3 C11 C3  C  0 1 Y N N 29.189 -29.974 12.921 -1.664 2.027  -0.003 C11  6M3 3  
6M3 C12 C4  C  0 1 Y N N 29.259 -30.152 14.298 -1.127 0.744  -0.037 C12  6M3 4  
6M3 C13 C5  C  0 1 Y N N 29.106 -31.545 14.862 -2.022 -0.432 -0.172 C13  6M3 5  
6M3 C14 C6  C  0 1 N N N 29.337 -28.629 10.883 -1.360 4.452  0.155  C14  6M3 6  
6M3 C16 C7  C  0 1 Y N N 27.868 -31.958 15.394 -2.168 -1.326 0.888  C16  6M3 7  
6M3 C17 C8  C  0 1 Y N N 27.639 -33.267 15.848 -3.002 -2.419 0.756  C17  6M3 8  
6M3 C18 C9  C  0 1 Y N N 28.661 -34.215 15.681 -3.692 -2.626 -0.425 C18  6M3 9  
6M3 C19 C10 C  0 1 Y N N 29.874 -33.839 15.062 -3.550 -1.742 -1.480 C19  6M3 10 
6M3 C20 C11 C  0 1 Y N N 30.099 -32.514 14.622 -2.724 -0.643 -1.357 C20  6M3 11 
6M3 C21 C12 C  0 1 N N N 29.260 -29.377 19.774 3.417  -0.476 -1.673 C21  6M3 12 
6M3 C22 C13 C  0 1 N N N 30.784 -29.070 19.797 2.373  0.553  -2.120 C22  6M3 13 
6M3 C23 C14 C  0 1 N N N 31.559 -29.610 18.549 1.045  -0.150 -2.382 C23  6M3 14 
6M3 C24 C15 C  0 1 N N S 31.268 -28.899 17.180 0.862  -1.328 -1.426 C24  6M3 15 
6M3 N2  N1  N  0 1 Y N N 28.751 -28.559 17.406 2.199  -0.800 0.552  N2   6M3 16 
6M3 N4  N2  N  0 1 Y N N 27.049 -27.302 17.669 3.863  -0.813 1.923  N4   6M3 17 
6M3 C5  C16 C  0 1 Y N N 27.416 -27.811 18.993 4.369  -0.637 0.691  C5   6M3 18 
6M3 C6  C17 C  0 1 N N S 29.831 -29.265 16.667 0.834  -0.825 0.019  C6   6M3 19 
6M3 C7  C18 C  0 1 Y N N 29.721 -29.100 15.125 0.252  0.565  0.056  C7   6M3 20 
6M3 C8  C19 C  0 1 Y N N 30.008 -27.839 14.483 1.088  1.658  0.182  C8   6M3 21 
6M3 C9  C20 C  0 1 Y N N 29.913 -27.666 13.082 0.564  2.934  0.216  C9   6M3 22 
6M3 C10 C21 C  0 1 Y N N 29.498 -28.770 12.299 -0.816 3.128  0.118  C10  6M3 23 
6M3 N15 N3  N  0 1 N N N 29.208 -28.515 9.743  -1.792 5.503  0.183  N15  6M3 24 
6M3 O25 O1  O  0 1 N N N 31.306 -27.455 17.321 -0.368 -1.993 -1.722 O25  6M3 25 
6M3 CL1 CL1 CL 0 0 N N N 26.665 -30.784 15.691 -1.301 -1.067 2.370  CL26 6M3 26 
6M3 H1  H1  H  0 1 N N N 27.837 -27.537 15.790 1.893  -1.075 2.677  H1   6M3 27 
6M3 H2  H2  H  0 1 N N N 28.881 -30.808 12.308 -2.732 2.171  -0.075 H2   6M3 28 
6M3 H3  H3  H  0 1 N N N 26.702 -33.537 16.313 -3.116 -3.113 1.575  H3   6M3 29 
6M3 H4  H4  H  0 1 N N N 28.520 -35.229 16.025 -4.343 -3.482 -0.525 H4   6M3 30 
6M3 H5  H5  H  0 1 N N N 30.647 -34.580 14.922 -4.091 -1.910 -2.399 H5   6M3 31 
6M3 H6  H6  H  0 1 N N N 31.014 -32.251 14.112 -2.618 0.049  -2.179 H6   6M3 32 
6M3 H7  H7  H  0 1 N N N 28.841 -29.116 20.757 4.411  -0.133 -1.957 H7   6M3 33 
6M3 H8  H8  H  0 1 N N N 29.128 -30.454 19.593 3.211  -1.435 -2.149 H8   6M3 34 
6M3 H9  H9  H  0 1 N N N 31.216 -29.529 20.698 2.240  1.299  -1.337 H9   6M3 35 
6M3 H10 H10 H  0 1 N N N 30.917 -27.979 19.842 2.711  1.041  -3.034 H10  6M3 36 
6M3 H11 H11 H  0 1 N N N 31.305 -30.674 18.433 0.229  0.558  -2.239 H11  6M3 37 
6M3 H12 H12 H  0 1 N N N 32.635 -29.510 18.755 1.028  -0.515 -3.408 H12  6M3 38 
6M3 H13 H13 H  0 1 N N N 32.008 -29.234 16.439 1.690  -2.026 -1.549 H13  6M3 39 
6M3 H14 H14 H  0 1 N N N 26.960 -27.605 19.950 5.413  -0.521 0.443  H14  6M3 40 
6M3 H15 H15 H  0 1 N N N 29.704 -30.339 16.868 0.220  -1.492 0.624  H15  6M3 41 
6M3 H16 H16 H  0 1 N N N 30.305 -26.999 15.093 2.156  1.513  0.254  H16  6M3 42 
6M3 H17 H17 H  0 1 N N N 30.151 -26.718 12.623 1.222  3.785  0.315  H17  6M3 43 
6M3 H18 H18 H  0 1 N N N 32.164 -27.189 17.631 -0.419 -2.344 -2.621 H18  6M3 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6M3 N15 C14 TRIP N N 1  
6M3 C14 C10 SING N N 2  
6M3 C10 C11 DOUB Y N 3  
6M3 C10 C9  SING Y N 4  
6M3 C11 C12 SING Y N 5  
6M3 C9  C8  DOUB Y N 6  
6M3 C12 C13 SING N N 7  
6M3 C12 C7  DOUB Y N 8  
6M3 C8  C7  SING Y N 9  
6M3 C20 C13 DOUB Y N 10 
6M3 C20 C19 SING Y N 11 
6M3 C13 C16 SING Y N 12 
6M3 C19 C18 DOUB Y N 13 
6M3 C7  C6  SING N N 14 
6M3 C16 CL1 SING N N 15 
6M3 C16 C17 DOUB Y N 16 
6M3 C18 C17 SING Y N 17 
6M3 C6  C24 SING N N 18 
6M3 C6  N2  SING N N 19 
6M3 C3  N2  SING Y N 20 
6M3 C3  N4  DOUB Y N 21 
6M3 C24 O25 SING N N 22 
6M3 C24 C23 SING N N 23 
6M3 N2  C1  SING Y N 24 
6M3 N4  C5  SING Y N 25 
6M3 C23 C22 SING N N 26 
6M3 C1  C5  DOUB Y N 27 
6M3 C1  C21 SING N N 28 
6M3 C21 C22 SING N N 29 
6M3 C3  H1  SING N N 30 
6M3 C11 H2  SING N N 31 
6M3 C17 H3  SING N N 32 
6M3 C18 H4  SING N N 33 
6M3 C19 H5  SING N N 34 
6M3 C20 H6  SING N N 35 
6M3 C21 H7  SING N N 36 
6M3 C21 H8  SING N N 37 
6M3 C22 H9  SING N N 38 
6M3 C22 H10 SING N N 39 
6M3 C23 H11 SING N N 40 
6M3 C23 H12 SING N N 41 
6M3 C24 H13 SING N N 42 
6M3 C5  H14 SING N N 43 
6M3 C6  H15 SING N N 44 
6M3 C8  H16 SING N N 45 
6M3 C9  H17 SING N N 46 
6M3 O25 H18 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6M3 SMILES           ACDLabs              12.01 "c21cncn1C(C(CCC2)O)c3c(cc(C#N)cc3)c4c(Cl)cccc4"                                                                                                              
6M3 InChI            InChI                1.03  "InChI=1S/C21H18ClN3O/c22-19-6-2-1-5-16(19)18-10-14(11-23)8-9-17(18)21-20(26)7-3-4-15-12-24-13-25(15)21/h1-2,5-6,8-10,12-13,20-21,26H,3-4,7H2/t20-,21-/m0/s1" 
6M3 InChIKey         InChI                1.03  FKEZMHCTDJKGQH-SFTDATJTSA-N                                                                                                                                   
6M3 SMILES_CANONICAL CACTVS               3.385 "O[C@H]1CCCc2cncn2[C@H]1c3ccc(cc3c4ccccc4Cl)C#N"                                                                                                              
6M3 SMILES           CACTVS               3.385 "O[CH]1CCCc2cncn2[CH]1c3ccc(cc3c4ccccc4Cl)C#N"                                                                                                                
6M3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1ccc(c(c1)c2cc(ccc2[C@H]3[C@H](CCCc4n3cnc4)O)C#N)Cl"                                                                                                        
6M3 SMILES           "OpenEye OEToolkits" 2.0.4 "c1ccc(c(c1)c2cc(ccc2C3C(CCCc4n3cnc4)O)C#N)Cl"                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6M3 "SYSTEMATIC NAME" ACDLabs              12.01 "2'-chloro-6-[(5S,6S)-6-hydroxy-6,7,8,9-tetrahydro-5H-imidazo[1,5-a]azepin-5-yl][1,1'-biphenyl]-3-carbonitrile"         
6M3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "3-(2-chlorophenyl)-4-[(5~{S},6~{S})-6-oxidanyl-6,7,8,9-tetrahydro-5~{H}-imidazo[1,5-a]azepin-5-yl]benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6M3 "Create component" 2016-05-04 EBI  
6M3 "Initial release"  2016-11-02 RCSB 
# 
