data_693
#

_chem_comp.id                                   693
_chem_comp.name                                 "2-(5-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-2'-FLUORO-6-OXIDO-1,1'-BIPHENYL-3-YL)SUCCINATE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H17 F N4 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        CRA_17693
_chem_comp.pdbx_formal_charge                   -2
_chem_comp.pdbx_initial_date                    2003-03-14
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       460.414
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    693
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1O30
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
693  C1      C1      C   0  1  Y  N  N  43.979  -3.132  26.009   5.900   0.127   0.017  C1      693   1  
693  C2      C2      C   0  1  Y  N  N  44.166  -1.715  25.988   5.777   1.239  -0.825  C2      693   2  
693  C3      C3      C   0  1  Y  N  N  44.026  -0.921  27.125   4.544   1.717  -1.164  C3      693   3  
693  C4      C4      C   0  1  Y  N  N  43.696  -1.569  28.290   3.398   1.102  -0.675  C4      693   4  
693  C5      C5      C   0  1  Y  N  N  43.508  -2.893  28.369   3.503  -0.017   0.172  C5      693   5  
693  C6      C6      C   0  1  Y  N  N  43.637  -3.722  27.260   4.765  -0.506   0.512  C6      693   6  
693  C7      C7      C   0  1  N  N  N  44.143  -3.881  24.829   7.242  -0.381   0.376  C7      693   7  
693  N1      N1      N   0  1  N  N  N  43.829  -5.162  24.809   7.361  -1.439   1.177  N1      693   8  
693  N2      N2      N   1  1  N  N  N  44.619  -3.272  23.754   8.331   0.220  -0.101  N2      693   9  
693  N3      N3      N   0  1  Y  N  N  43.508  -1.099  29.471   2.048   1.342  -0.830  N3      693  10  
693  N4      N4      N   0  1  Y  N  N  43.193  -3.287  29.591   2.241  -0.400   0.488  N4      693  11  
693  C8      C8      C   0  1  Y  N  N  43.215  -2.120  30.209   1.381   0.396  -0.099  C8      693  12  
693  "C1'"   "C1'"   C   0  1  Y  N  N  42.999  -1.984  31.601  -0.089   0.289   0.012  "C1'"   693  13  
693  "C2'"   "C2'"   C   0  1  Y  N  N  42.679  -3.093  32.396  -0.703  -0.965   0.007  "C2'"   693  14  
693  "C3'"   "C3'"   C   0  1  Y  N  N  42.455  -3.014  33.778  -2.075  -1.066   0.111  "C3'"   693  15  
693  CVX     "C31'"  C   0  1  N  N  R  42.081  -4.306  34.559  -2.729  -2.423   0.105  CVX     693  16  
693  CWX     "C32'"  C   0  1  N  N  N  40.576  -4.484  34.251  -2.212  -3.235   1.264  CWX     693  17  
693  OXX     "O33'"  O   0  1  N  N  N  40.254  -5.317  33.419  -1.389  -2.756   2.026  OXX     693  18  
693  OYX     "O34'"  O  -1  1  N  N  N  39.788  -3.772  34.842  -2.617  -4.372   1.441  OYX     693  19  
693  C6X     "C42'"  C   0  1  N  N  N  42.382  -4.210  36.126  -2.401  -3.141  -1.206  C6X     693  20  
693  C7X     "C43'"  C   0  1  N  N  N  43.111  -5.440  36.776  -3.153  -4.445  -1.267  C7X     693  21  
693  O8X     "O44'"  O   0  1  N  N  N  42.980  -6.555  36.293  -3.917  -4.786  -0.304  O8X     693  22  
693  O9X     "O45'"  O  -1  1  N  N  N  43.797  -5.222  37.774  -3.026  -5.209  -2.280  O9X     693  23  
693  "C4'"   "C4'"   C   0  1  Y  N  N  42.566  -1.772  34.374  -2.853   0.071   0.221  "C4'"   693  24  
693  "C5'"   "C5'"   C   0  1  Y  N  N  42.888  -0.619  33.655  -2.259   1.330   0.228  "C5'"   693  25  
693  "C6'"   "C6'"   C   0  1  Y  N  N  43.093  -0.729  32.271  -0.870   1.444   0.129  "C6'"   693  26  
693  "O6'"   "O6'"   O  -1  1  N  N  N  43.360   0.441  31.578  -0.282   2.667   0.135  "O6'"   693  27  
693  C1B     "C1''"  C   0  1  Y  N  N  43.041   0.586  34.341  -3.097   2.548   0.346  C1B     693  28  
693  C2B     "C2''"  C   0  1  Y  N  N  44.277   1.260  34.335  -3.156   3.463  -0.706  C2B     693  29  
693  C3B     "C3''"  C   0  1  Y  N  N  44.449   2.428  35.045  -3.945   4.593  -0.591  C3B     693  30  
693  C4B     "C4''"  C   0  1  Y  N  N  43.399   2.967  35.781  -4.664   4.822   0.568  C4B     693  31  
693  C5B     "C5''"  C   0  1  Y  N  N  42.174   2.332  35.796  -4.604   3.920   1.615  C5B     693  32  
693  C6B     "C6''"  C   0  1  Y  N  N  41.999   1.156  35.086  -3.825   2.786   1.511  C6B     693  33  
693  F2B     "F2''"  F   0  1  N  N  N  45.369   0.773  33.592  -2.453   3.240  -1.838  F2B     693  34  
693  HC2     HC2     H   0  1  N  N  N  44.425  -1.226  25.068   6.664   1.722  -1.208  HC2     693  35  
693  HC3     HC3     H   0  1  N  N  N  44.162   0.149  27.094   4.460   2.576  -1.814  HC3     693  36  
693  HC6     HC6     H   0  1  N  N  N  43.479  -4.785  27.350   4.859  -1.367   1.157  HC6     693  37  
693  HH11    HH11    H   0  0  N  N  N  43.493  -5.566  25.673   8.241  -1.771   1.413  HH11    693  38  
693  HH12    HH12    H   0  0  N  N  N  43.896  -5.789  24.038   6.568  -1.876   1.524  HH12    693  39  
693  HH21    HH21    H   0  0  N  N  N  44.900  -2.305  23.798   8.244   0.991  -0.684  HH21    693  40  
693  HH22    HH22    H   0  0  N  N  N  44.772  -3.735  22.888   9.211  -0.110   0.138  HH22    693  41  
693  HN3     HN3     H   0  1  N  N  N  43.556  -0.163  29.795   1.647   2.049  -1.359  HN3     693  42  
693  "HC2'"  "HC2'"  H   0  0  N  N  N  42.599  -4.058  31.918  -0.102  -1.858  -0.079  "HC2'"  693  43  
693  H31B    H31B    H   0  0  N  N  N  42.632  -5.133  34.134  -3.809  -2.307   0.195  H31B    693  44  
693  H42A    H42A    H   0  0  N  N  N  43.017  -3.358  36.303  -2.695  -2.513  -2.048  H42A    693  45  
693  H42B    H42B    H   0  0  N  N  N  41.468  -4.040  36.673  -1.330  -3.336  -1.256  H42B    693  46  
693  "HC4'"  "HC4'"  H   0  0  N  N  N  42.396  -1.679  35.435  -3.927  -0.017   0.302  "HC4'"  693  47  
693  H3B     "H3''"  H   0  1  N  N  N  45.407   2.922  35.029  -3.996   5.300  -1.406  H3B     693  48  
693  H4B     "H4''"  H   0  1  N  N  N  43.539   3.882  36.337  -5.275   5.708   0.655  H4B     693  49  
693  H5B     "H5''"  H   0  1  N  N  N  41.352   2.746  36.360  -5.169   4.105   2.517  H5B     693  50  
693  H6B     "H6''"  H   0  1  N  N  N  41.031   0.677  35.113  -3.780   2.083   2.330  H6B     693  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
693  C1     C2      DOUB  Y  N   1  
693  C1     C6      SING  Y  N   2  
693  C1     C7      SING  N  N   3  
693  C2     C3      SING  Y  N   4  
693  C2     HC2     SING  N  N   5  
693  C3     C4      DOUB  Y  N   6  
693  C3     HC3     SING  N  N   7  
693  C4     C5      SING  Y  N   8  
693  C4     N3      SING  Y  N   9  
693  C5     C6      DOUB  Y  N  10  
693  C5     N4      SING  Y  N  11  
693  C6     HC6     SING  N  N  12  
693  C7     N1      SING  N  N  13  
693  C7     N2      DOUB  N  N  14  
693  N1     HH11    SING  N  N  15  
693  N1     HH12    SING  N  N  16  
693  N2     HH21    SING  N  N  17  
693  N2     HH22    SING  N  N  18  
693  N3     C8      SING  Y  N  19  
693  N3     HN3     SING  N  N  20  
693  N4     C8      DOUB  Y  N  21  
693  C8     "C1'"   SING  Y  N  22  
693  "C1'"  "C2'"   DOUB  Y  N  23  
693  "C1'"  "C6'"   SING  Y  N  24  
693  "C2'"  "C3'"   SING  Y  N  25  
693  "C2'"  "HC2'"  SING  N  N  26  
693  "C3'"  CVX     SING  N  N  27  
693  "C3'"  "C4'"   DOUB  Y  N  28  
693  CVX    CWX     SING  N  N  29  
693  CVX    C6X     SING  N  N  30  
693  CVX    H31B    SING  N  N  31  
693  CWX    OXX     DOUB  N  N  32  
693  CWX    OYX     SING  N  N  33  
693  C6X    C7X     SING  N  N  34  
693  C6X    H42A    SING  N  N  35  
693  C6X    H42B    SING  N  N  36  
693  C7X    O8X     DOUB  N  N  37  
693  C7X    O9X     SING  N  N  38  
693  "C4'"  "C5'"   SING  Y  N  39  
693  "C4'"  "HC4'"  SING  N  N  40  
693  "C5'"  "C6'"   DOUB  Y  N  41  
693  "C5'"  C1B     SING  Y  N  42  
693  "C6'"  "O6'"   SING  N  N  43  
693  C1B    C2B     DOUB  Y  N  44  
693  C1B    C6B     SING  Y  N  45  
693  C2B    C3B     SING  Y  N  46  
693  C2B    F2B     SING  N  N  47  
693  C3B    C4B     DOUB  Y  N  48  
693  C3B    H3B     SING  N  N  49  
693  C4B    C5B     SING  Y  N  50  
693  C4B    H4B     SING  N  N  51  
693  C5B    C6B     DOUB  Y  N  52  
693  C5B    H5B     SING  N  N  53  
693  C6B    H6B     SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
693  SMILES            ACDLabs               10.04  "[O-]C(=O)CC(C([O-])=O)c4cc(c2nc1cc(ccc1n2)\C(=[NH2+])N)c([O-])c(c3ccccc3F)c4"  
693  SMILES_CANONICAL  CACTVS                3.341  "NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(cc(c3[O-])c4ccccc4F)[C@@H](CC([O-])=O)C([O-])=O"  
693  SMILES            CACTVS                3.341  "NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(cc(c3[O-])c4ccccc4F)[CH](CC([O-])=O)C([O-])=O"  
693  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "c1ccc(c(c1)c2cc(cc(c2[O-])c3[nH]c4ccc(cc4n3)C(=[NH2+])N)[C@@H](CC(=O)[O-])C(=O)[O-])F"  
693  SMILES            "OpenEye OEToolkits"  1.5.0  "c1ccc(c(c1)c2cc(cc(c2[O-])c3[nH]c4ccc(cc4n3)C(=[NH2+])N)C(CC(=O)[O-])C(=O)[O-])F"  
693  InChI             InChI                 1.03   "InChI=1S/C24H19FN4O5/c25-17-4-2-1-3-13(17)15-7-12(14(24(33)34)10-20(30)31)8-16(21(15)32)23-28-18-6-5-11(22(26)27)9-19(18)29-23/h1-9,14,32H,10H2,(H3,26,27)(H,28,29)(H,30,31)(H,33,34)/p-2/t14-/m1/s1"  
693  InChIKey          InChI                 1.03   XCOFROALSAFROV-CQSZACIVSA-L  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
693  "SYSTEMATIC NAME"  ACDLabs               10.04  "(2R)-2-(5-{5-[amino(iminio)methyl]-1H-benzimidazol-2-yl}-2'-fluoro-6-oxidobiphenyl-3-yl)butanedioate"  
693  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(2R)-2-[3-[5-(amino-azaniumylidene-methyl)-1H-benzimidazol-2-yl]-5-(2-fluorophenyl)-4-oxido-phenyl]butanedioate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
693  "Create component"      2003-03-14  RCSB  
693  "Modify aromatic_flag"  2011-06-04  RCSB  
693  "Modify descriptor"     2011-06-04  RCSB  
693  "Modify synonyms"       2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     693
_pdbx_chem_comp_synonyms.name        CRA_17693
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
